data_4QRC # _model_server_result.job_id 5hWCAA8ELEdkuztEzpoGag _model_server_result.datetime_utc '2024-12-03 16:16:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qrc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":802}' # _entry.id 4QRC # _exptl.entry_id 4QRC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 532.559 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-(imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}benzam ide' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.94 _cell.angle_gamma 90 _cell.entry_id 4QRC _cell.length_a 42.722 _cell.length_b 61.593 _cell.length_c 60.311 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QRC _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H27 F3 N6 O' _chem_comp.formula_weight 532.559 _chem_comp.id 0LI _chem_comp.mon_nstd_flag . _chem_comp.name '3-(imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}benzam ide' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Ponatinib # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C84 0LI doub 1 n y N1 C1 0LI sing 2 n y N3 C20 0LI sing 3 n n N3 C21 0LI sing 4 n n N3 C24 0LI sing 5 n n C4 C5 0LI sing 6 n n C4 C3 0LI trip 7 n n C5 C6 0LI doub 8 n y C5 C10 0LI sing 9 n y C6 C7 0LI sing 10 n y C6 C11 0LI sing 11 n n C7 C8 0LI doub 12 n y C7 H7 0LI sing 13 n n C8 C9 0LI sing 14 n y C8 H8 0LI sing 15 n n C10 C9 0LI doub 16 n y C10 H10 0LI sing 17 n n C13 N2 0LI sing 18 n n C13 C14 0LI doub 19 n y C13 C18 0LI sing 20 n y C15 C14 0LI sing 21 n y C15 C16 0LI doub 22 n y C15 H15 0LI sing 23 n n C17 C16 0LI sing 24 n y C17 C18 0LI doub 25 n y C17 C19 0LI sing 26 n n C20 C16 0LI sing 27 n n C20 H20 0LI sing 28 n n C20 H20A 0LI sing 29 n n C21 C22 0LI sing 30 n n C21 H21 0LI sing 31 n n C21 H21A 0LI sing 32 n n C22 N4 0LI sing 33 n n C22 H22 0LI sing 34 n n C22 H22A 0LI sing 35 n n C24 C23 0LI sing 36 n n C24 H24 0LI sing 37 n n C24 H24A 0LI sing 38 n n C81 C82 0LI doub 39 n y C81 C84 0LI sing 40 n y C81 H81 0LI sing 41 n n C82 C83 0LI sing 42 n y C82 H82 0LI sing 43 n n C83 N81 0LI doub 44 n y C83 H83 0LI sing 45 n n N81 N82 0LI sing 46 n y N82 C84 0LI sing 47 n y N82 C2 0LI sing 48 n y C1 C2 0LI doub 49 n y C1 H1 0LI sing 50 n n C2 C3 0LI sing 51 n n C9 C12 0LI sing 52 n n C11 H11 0LI sing 53 n n C11 H11A 0LI sing 54 n n C11 H11B 0LI sing 55 n n C12 O1 0LI doub 56 n n C12 N2 0LI sing 57 n n N2 HN2 0LI sing 58 n n C14 H14 0LI sing 59 n n C18 H18 0LI sing 60 n n C19 F1 0LI sing 61 n n C19 F2 0LI sing 62 n n C19 F3 0LI sing 63 n n C23 N4 0LI sing 64 n n C23 H23 0LI sing 65 n n C23 H23A 0LI sing 66 n n C25 N4 0LI sing 67 n n C25 H25 0LI sing 68 n n C25 H25A 0LI sing 69 n n C25 H25B 0LI sing 70 n n # _atom_sites.entry_id 4QRC _atom_sites.fract_transf_matrix[1][1] 0.023407 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003265 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016236 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016741 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 801 1 SO4 SO4 . C 3 0LI A 1 802 1 0LI 0LI . D 2 SO4 A 1 803 1 SO4 SO4 . E 2 SO4 A 1 804 1 SO4 SO4 . F 2 SO4 A 1 805 1 SO4 SO4 . G 4 HOH A 1 901 1 HOH HOH . G 4 HOH A 2 902 2 HOH HOH . G 4 HOH A 3 903 3 HOH HOH . G 4 HOH A 4 904 4 HOH HOH . G 4 HOH A 5 905 5 HOH HOH . G 4 HOH A 6 906 7 HOH HOH . G 4 HOH A 7 907 8 HOH HOH . G 4 HOH A 8 908 10 HOH HOH . G 4 HOH A 9 909 11 HOH HOH . G 4 HOH A 10 910 12 HOH HOH . G 4 HOH A 11 911 13 HOH HOH . G 4 HOH A 12 912 14 HOH HOH . G 4 HOH A 13 913 15 HOH HOH . G 4 HOH A 14 914 16 HOH HOH . G 4 HOH A 15 915 17 HOH HOH . G 4 HOH A 16 916 18 HOH HOH . G 4 HOH A 17 917 19 HOH HOH . G 4 HOH A 18 918 20 HOH HOH . G 4 HOH A 19 919 21 HOH HOH . G 4 HOH A 20 920 22 HOH HOH . G 4 HOH A 21 921 23 HOH HOH . G 4 HOH A 22 922 24 HOH HOH . G 4 HOH A 23 923 25 HOH HOH . G 4 HOH A 24 924 26 HOH HOH . G 4 HOH A 25 925 27 HOH HOH . G 4 HOH A 26 926 28 HOH HOH . G 4 HOH A 27 927 29 HOH HOH . G 4 HOH A 28 928 30 HOH HOH . G 4 HOH A 29 929 31 HOH HOH . G 4 HOH A 30 930 32 HOH HOH . G 4 HOH A 31 931 33 HOH HOH . G 4 HOH A 32 932 34 HOH HOH . G 4 HOH A 33 933 35 HOH HOH . G 4 HOH A 34 934 36 HOH HOH . G 4 HOH A 35 935 37 HOH HOH . G 4 HOH A 36 936 38 HOH HOH . G 4 HOH A 37 937 39 HOH HOH . G 4 HOH A 38 938 41 HOH HOH . G 4 HOH A 39 939 42 HOH HOH . G 4 HOH A 40 940 43 HOH HOH . G 4 HOH A 41 941 44 HOH HOH . G 4 HOH A 42 942 45 HOH HOH . G 4 HOH A 43 943 46 HOH HOH . G 4 HOH A 44 944 47 HOH HOH . G 4 HOH A 45 945 48 HOH HOH . G 4 HOH A 46 946 49 HOH HOH . G 4 HOH A 47 947 50 HOH HOH . G 4 HOH A 48 948 51 HOH HOH . G 4 HOH A 49 949 52 HOH HOH . G 4 HOH A 50 950 53 HOH HOH . G 4 HOH A 51 951 54 HOH HOH . G 4 HOH A 52 952 55 HOH HOH . G 4 HOH A 53 953 56 HOH HOH . G 4 HOH A 54 954 57 HOH HOH . G 4 HOH A 55 955 58 HOH HOH . G 4 HOH A 56 956 59 HOH HOH . G 4 HOH A 57 957 60 HOH HOH . G 4 HOH A 58 958 61 HOH HOH . G 4 HOH A 59 959 62 HOH HOH . G 4 HOH A 60 960 63 HOH HOH . G 4 HOH A 61 961 64 HOH HOH . G 4 HOH A 62 962 65 HOH HOH . G 4 HOH A 63 963 66 HOH HOH . G 4 HOH A 64 964 67 HOH HOH . G 4 HOH A 65 965 68 HOH HOH . G 4 HOH A 66 966 69 HOH HOH . G 4 HOH A 67 967 70 HOH HOH . G 4 HOH A 68 968 71 HOH HOH . G 4 HOH A 69 969 72 HOH HOH . G 4 HOH A 70 970 73 HOH HOH . G 4 HOH A 71 971 74 HOH HOH . G 4 HOH A 72 972 75 HOH HOH . G 4 HOH A 73 973 76 HOH HOH . G 4 HOH A 74 974 77 HOH HOH . G 4 HOH A 75 975 78 HOH HOH . G 4 HOH A 76 976 79 HOH HOH . G 4 HOH A 77 977 80 HOH HOH . G 4 HOH A 78 978 81 HOH HOH . G 4 HOH A 79 979 82 HOH HOH . G 4 HOH A 80 980 83 HOH HOH . G 4 HOH A 81 981 84 HOH HOH . G 4 HOH A 82 982 85 HOH HOH . G 4 HOH A 83 983 86 HOH HOH . G 4 HOH A 84 984 87 HOH HOH . G 4 HOH A 85 985 88 HOH HOH . G 4 HOH A 86 986 89 HOH HOH . G 4 HOH A 87 987 90 HOH HOH . G 4 HOH A 88 988 91 HOH HOH . G 4 HOH A 89 989 92 HOH HOH . G 4 HOH A 90 990 94 HOH HOH . G 4 HOH A 91 991 95 HOH HOH . G 4 HOH A 92 992 96 HOH HOH . G 4 HOH A 93 993 97 HOH HOH . G 4 HOH A 94 994 99 HOH HOH . G 4 HOH A 95 995 100 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 0LI . . . C 3 48.455 2.739 83.357 1 28.39 ? N1 0LI 802 A 1 HETATM 2 N N3 0LI . . . C 3 52.012 0.667 67.703 1 36.89 ? N3 0LI 802 A 1 HETATM 3 C C4 0LI . . . C 3 49.925 -0.151 79.803 1 36.52 ? C4 0LI 802 A 1 HETATM 4 C C5 0LI . . . C 3 50.677 -0.853 78.716 1 37.28 ? C5 0LI 802 A 1 HETATM 5 C C6 0LI . . . C 3 51.308 -2.095 78.875 1 39.99 ? C6 0LI 802 A 1 HETATM 6 C C7 0LI . . . C 3 51.984 -2.696 77.818 1 38.31 ? C7 0LI 802 A 1 HETATM 7 C C8 0LI . . . C 3 52.039 -2.072 76.593 1 38.85 ? C8 0LI 802 A 1 HETATM 8 C C10 0LI . . . C 3 50.732 -0.211 77.495 1 38.91 ? C10 0LI 802 A 1 HETATM 9 C C13 0LI . . . C 3 52.283 0.023 72.687 1 25.44 ? C13 0LI 802 A 1 HETATM 10 C C15 0LI . . . C 3 52.298 -0.218 70.263 1 31.55 ? C15 0LI 802 A 1 HETATM 11 C C17 0LI . . . C 3 52.426 1.978 71.232 1 33.8 ? C17 0LI 802 A 1 HETATM 12 C C20 0LI . . . C 3 52.449 1.636 68.666 1 35.75 ? C20 0LI 802 A 1 HETATM 13 C C21 0LI . . . C 3 50.577 0.75 67.483 1 44.86 ? C21 0LI 802 A 1 HETATM 14 C C22 0LI . . . C 3 50.094 -0.301 66.557 1 44.44 ? C22 0LI 802 A 1 HETATM 15 C C24 0LI . . . C 3 52.882 0.584 66.527 1 39.71 ? C24 0LI 802 A 1 HETATM 16 C C81 0LI . . . C 3 45.994 2.572 83.619 1 36.88 ? C81 0LI 802 A 1 HETATM 17 C C82 0LI . . . C 3 44.891 1.926 83.096 1 38.88 ? C82 0LI 802 A 1 HETATM 18 C C83 0LI . . . C 3 45.028 1.034 82.071 1 37.33 ? C83 0LI 802 A 1 HETATM 19 N N81 0LI . . . C 3 46.231 0.763 81.545 1 35.29 ? N81 0LI 802 A 1 HETATM 20 N N82 0LI . . . C 3 47.356 1.383 82.034 1 35.67 ? N82 0LI 802 A 1 HETATM 21 C C84 0LI . . . C 3 47.249 2.287 83.073 1 34.05 ? C84 0LI 802 A 1 HETATM 22 C C1 0LI . . . C 3 49.351 2.184 82.559 1 31.93 ? C1 0LI 802 A 1 HETATM 23 C C2 0LI . . . C 3 48.682 1.318 81.704 1 34.07 ? C2 0LI 802 A 1 HETATM 24 C C3 0LI . . . C 3 49.338 0.481 80.656 1 35.65 ? C3 0LI 802 A 1 HETATM 25 C C9 0LI . . . C 3 51.419 -0.848 76.461 1 39.24 ? C9 0LI 802 A 1 HETATM 26 C C11 0LI . . . C 3 51.268 -2.804 80.194 1 36.14 ? C11 0LI 802 A 1 HETATM 27 C C12 0LI . . . C 3 51.432 -0.087 75.173 1 36.63 ? C12 0LI 802 A 1 HETATM 28 O O1 0LI . . . C 3 50.769 0.943 75.271 1 28.54 ? O1 0LI 802 A 1 HETATM 29 N N2 0LI . . . C 3 52.201 -0.607 74.016 1 30.48 ? N2 0LI 802 A 1 HETATM 30 C C14 0LI . . . C 3 52.244 -0.768 71.543 1 31.06 ? C14 0LI 802 A 1 HETATM 31 C C16 0LI . . . C 3 52.384 1.135 70.099 1 34.66 ? C16 0LI 802 A 1 HETATM 32 C C18 0LI . . . C 3 52.369 1.429 72.534 1 29.18 ? C18 0LI 802 A 1 HETATM 33 C C19 0LI . . . C 3 52.513 3.464 71.043 1 33.51 ? C19 0LI 802 A 1 HETATM 34 F F1 0LI . . . C 3 53.7 3.755 70.52 1 36.24 ? F1 0LI 802 A 1 HETATM 35 F F2 0LI . . . C 3 52.324 4.073 72.221 1 30.68 ? F2 0LI 802 A 1 HETATM 36 F F3 0LI . . . C 3 51.579 3.868 70.207 1 35.27 ? F3 0LI 802 A 1 HETATM 37 C C23 0LI . . . C 3 52.239 -0.164 65.37 1 39.95 ? C23 0LI 802 A 1 HETATM 38 C C25 0LI . . . C 3 50.158 -0.585 64.143 1 37.53 ? C25 0LI 802 A 1 HETATM 39 N N4 0LI . . . C 3 50.778 -0.084 65.324 1 40.34 ? N4 0LI 802 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 39 #