data_4QRJ # _model_server_result.job_id bIx0fn-xK3rmn7urHzk8dA _model_server_result.datetime_utc '2024-11-16 10:54:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qrj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 4QRJ # _exptl.entry_id 4QRJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 95.22 _cell.angle_beta 90.54 _cell.angle_gamma 94.37 _cell.entry_id 4QRJ _cell.length_a 40.554 _cell.length_b 52.185 _cell.length_c 78.88 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QRJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,H 1 1 B,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 9 A ALA 31 1_555 A N MSE 10 A MSE 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale2 A C MSE 10 A MSE 32 1_555 A N LEU 11 A LEU 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 A C GLU 63 A GLU 85 1_555 A N MSE 64 A MSE 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale4 A C MSE 64 A MSE 86 1_555 A N ASN 65 A ASN 87 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.343 ? covale ? covale5 A C MSE 64 A MSE 86 1_555 A N ASN 65 A ASN 87 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.35 ? covale ? covale6 A C THR 115 A THR 137 1_555 A N MSE 116 A MSE 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale7 A C MSE 116 A MSE 138 1_555 A N SER 117 A SER 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale8 A C VAL 177 A VAL 199 1_555 A N MSE 178 A MSE 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale9 A C MSE 178 A MSE 200 1_555 A N HIS 179 A HIS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale10 A C ASP 339 A ASP 361 1_555 A N MSE 340 A MSE 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale11 A C MSE 340 A MSE 362 1_555 A N PRO 341 A PRO 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.368 ? covale ? covale12 B C ALA 9 B ALA 31 1_555 B N MSE 10 B MSE 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale13 B C MSE 10 B MSE 32 1_555 B N LEU 11 B LEU 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale14 B C GLU 63 B GLU 85 1_555 B N MSE 64 B MSE 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale15 B C MSE 64 B MSE 86 1_555 B N ASN 65 B ASN 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale16 B C THR 115 B THR 137 1_555 B N MSE 116 B MSE 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale17 B C MSE 116 B MSE 138 1_555 B N SER 117 B SER 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale18 B C VAL 177 B VAL 199 1_555 B N MSE 178 B MSE 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale19 B C MSE 178 B MSE 200 1_555 B N HIS 179 B HIS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale20 B C ASP 339 B ASP 361 1_555 B N MSE 340 B MSE 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale21 B C MSE 340 B MSE 362 1_555 B N PRO 341 B PRO 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.365 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 243 n n C1 C2 PEG sing 244 n n C1 H11 PEG sing 245 n n C1 H12 PEG sing 246 n n O1 HO1 PEG sing 247 n n C2 O2 PEG sing 248 n n C2 H21 PEG sing 249 n n C2 H22 PEG sing 250 n n O2 C3 PEG sing 251 n n C3 C4 PEG sing 252 n n C3 H31 PEG sing 253 n n C3 H32 PEG sing 254 n n C4 O4 PEG sing 255 n n C4 H41 PEG sing 256 n n C4 H42 PEG sing 257 n n O4 HO4 PEG sing 258 n n # _atom_sites.entry_id 4QRJ _atom_sites.fract_transf_matrix[1][1] 0.024658 _atom_sites.fract_transf_matrix[1][2] 0.001884 _atom_sites.fract_transf_matrix[1][3] 0.000407 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019218 _atom_sites.fract_transf_matrix[2][3] 0.001775 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012732 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACT A 1 401 376 ACT ACT . D 3 PEG A 1 402 377 PEG PEG . E 3 PEG A 1 403 378 PEG PEG . F 3 PEG A 1 404 380 PEG PEG . G 3 PEG B 1 401 379 PEG PEG . H 4 HOH A 1 501 381 HOH HOH . H 4 HOH A 2 502 382 HOH HOH . H 4 HOH A 3 503 385 HOH HOH . H 4 HOH A 4 504 389 HOH HOH . H 4 HOH A 5 505 390 HOH HOH . H 4 HOH A 6 506 391 HOH HOH . H 4 HOH A 7 507 392 HOH HOH . H 4 HOH A 8 508 393 HOH HOH . H 4 HOH A 9 509 394 HOH HOH . H 4 HOH A 10 510 395 HOH HOH . H 4 HOH A 11 511 398 HOH HOH . H 4 HOH A 12 512 399 HOH HOH . H 4 HOH A 13 513 401 HOH HOH . H 4 HOH A 14 514 403 HOH HOH . H 4 HOH A 15 515 404 HOH HOH . H 4 HOH A 16 516 408 HOH HOH . H 4 HOH A 17 517 411 HOH HOH . H 4 HOH A 18 518 412 HOH HOH . H 4 HOH A 19 519 414 HOH HOH . H 4 HOH A 20 520 418 HOH HOH . H 4 HOH A 21 521 420 HOH HOH . H 4 HOH A 22 522 422 HOH HOH . H 4 HOH A 23 523 423 HOH HOH . H 4 HOH A 24 524 426 HOH HOH . H 4 HOH A 25 525 430 HOH HOH . H 4 HOH A 26 526 431 HOH HOH . H 4 HOH A 27 527 436 HOH HOH . H 4 HOH A 28 528 438 HOH HOH . H 4 HOH A 29 529 440 HOH HOH . H 4 HOH A 30 530 443 HOH HOH . H 4 HOH A 31 531 444 HOH HOH . H 4 HOH A 32 532 453 HOH HOH . H 4 HOH A 33 533 456 HOH HOH . H 4 HOH A 34 534 458 HOH HOH . H 4 HOH A 35 535 459 HOH HOH . H 4 HOH A 36 536 460 HOH HOH . H 4 HOH A 37 537 461 HOH HOH . H 4 HOH A 38 538 462 HOH HOH . H 4 HOH A 39 539 464 HOH HOH . H 4 HOH A 40 540 465 HOH HOH . H 4 HOH A 41 541 467 HOH HOH . H 4 HOH A 42 542 468 HOH HOH . H 4 HOH A 43 543 471 HOH HOH . H 4 HOH A 44 544 475 HOH HOH . H 4 HOH A 45 545 476 HOH HOH . H 4 HOH A 46 546 477 HOH HOH . H 4 HOH A 47 547 478 HOH HOH . H 4 HOH A 48 548 480 HOH HOH . H 4 HOH A 49 549 485 HOH HOH . H 4 HOH A 50 550 486 HOH HOH . H 4 HOH A 51 551 488 HOH HOH . H 4 HOH A 52 552 489 HOH HOH . H 4 HOH A 53 553 490 HOH HOH . H 4 HOH A 54 554 492 HOH HOH . H 4 HOH A 55 555 493 HOH HOH . H 4 HOH A 56 556 494 HOH HOH . H 4 HOH A 57 557 496 HOH HOH . H 4 HOH A 58 558 497 HOH HOH . H 4 HOH A 59 559 499 HOH HOH . H 4 HOH A 60 560 501 HOH HOH . H 4 HOH A 61 561 504 HOH HOH . H 4 HOH A 62 562 505 HOH HOH . H 4 HOH A 63 563 509 HOH HOH . H 4 HOH A 64 564 515 HOH HOH . H 4 HOH A 65 565 516 HOH HOH . H 4 HOH A 66 566 517 HOH HOH . H 4 HOH A 67 567 518 HOH HOH . H 4 HOH A 68 568 520 HOH HOH . H 4 HOH A 69 569 522 HOH HOH . H 4 HOH A 70 570 523 HOH HOH . H 4 HOH A 71 571 525 HOH HOH . H 4 HOH A 72 572 529 HOH HOH . H 4 HOH A 73 573 531 HOH HOH . H 4 HOH A 74 574 532 HOH HOH . H 4 HOH A 75 575 535 HOH HOH . H 4 HOH A 76 576 536 HOH HOH . H 4 HOH A 77 577 538 HOH HOH . H 4 HOH A 78 578 539 HOH HOH . H 4 HOH A 79 579 540 HOH HOH . H 4 HOH A 80 580 541 HOH HOH . H 4 HOH A 81 581 542 HOH HOH . H 4 HOH A 82 582 543 HOH HOH . H 4 HOH A 83 583 544 HOH HOH . H 4 HOH A 84 584 545 HOH HOH . H 4 HOH A 85 585 546 HOH HOH . H 4 HOH A 86 586 547 HOH HOH . H 4 HOH A 87 587 548 HOH HOH . H 4 HOH A 88 588 550 HOH HOH . H 4 HOH A 89 589 555 HOH HOH . H 4 HOH A 90 590 556 HOH HOH . H 4 HOH A 91 591 557 HOH HOH . H 4 HOH A 92 592 558 HOH HOH . H 4 HOH A 93 593 559 HOH HOH . H 4 HOH A 94 594 560 HOH HOH . H 4 HOH A 95 595 561 HOH HOH . H 4 HOH A 96 596 562 HOH HOH . H 4 HOH A 97 597 563 HOH HOH . H 4 HOH A 98 598 569 HOH HOH . H 4 HOH A 99 599 573 HOH HOH . H 4 HOH A 100 600 574 HOH HOH . H 4 HOH A 101 601 579 HOH HOH . H 4 HOH A 102 602 581 HOH HOH . H 4 HOH A 103 603 582 HOH HOH . H 4 HOH A 104 604 586 HOH HOH . H 4 HOH A 105 605 587 HOH HOH . H 4 HOH A 106 606 588 HOH HOH . H 4 HOH A 107 607 589 HOH HOH . H 4 HOH A 108 608 590 HOH HOH . I 4 HOH B 1 501 383 HOH HOH . I 4 HOH B 2 502 384 HOH HOH . I 4 HOH B 3 503 386 HOH HOH . I 4 HOH B 4 504 387 HOH HOH . I 4 HOH B 5 505 388 HOH HOH . I 4 HOH B 6 506 396 HOH HOH . I 4 HOH B 7 507 397 HOH HOH . I 4 HOH B 8 508 400 HOH HOH . I 4 HOH B 9 509 402 HOH HOH . I 4 HOH B 10 510 405 HOH HOH . I 4 HOH B 11 511 406 HOH HOH . I 4 HOH B 12 512 407 HOH HOH . I 4 HOH B 13 513 409 HOH HOH . I 4 HOH B 14 514 410 HOH HOH . I 4 HOH B 15 515 413 HOH HOH . I 4 HOH B 16 516 415 HOH HOH . I 4 HOH B 17 517 416 HOH HOH . I 4 HOH B 18 518 417 HOH HOH . I 4 HOH B 19 519 419 HOH HOH . I 4 HOH B 20 520 421 HOH HOH . I 4 HOH B 21 521 424 HOH HOH . I 4 HOH B 22 522 425 HOH HOH . I 4 HOH B 23 523 427 HOH HOH . I 4 HOH B 24 524 428 HOH HOH . I 4 HOH B 25 525 429 HOH HOH . I 4 HOH B 26 526 432 HOH HOH . I 4 HOH B 27 527 433 HOH HOH . I 4 HOH B 28 528 434 HOH HOH . I 4 HOH B 29 529 435 HOH HOH . I 4 HOH B 30 530 437 HOH HOH . I 4 HOH B 31 531 439 HOH HOH . I 4 HOH B 32 532 441 HOH HOH . I 4 HOH B 33 533 442 HOH HOH . I 4 HOH B 34 534 445 HOH HOH . I 4 HOH B 35 535 446 HOH HOH . I 4 HOH B 36 536 447 HOH HOH . I 4 HOH B 37 537 448 HOH HOH . I 4 HOH B 38 538 449 HOH HOH . I 4 HOH B 39 539 450 HOH HOH . I 4 HOH B 40 540 451 HOH HOH . I 4 HOH B 41 541 452 HOH HOH . I 4 HOH B 42 542 454 HOH HOH . I 4 HOH B 43 543 455 HOH HOH . I 4 HOH B 44 544 457 HOH HOH . I 4 HOH B 45 545 463 HOH HOH . I 4 HOH B 46 546 466 HOH HOH . I 4 HOH B 47 547 469 HOH HOH . I 4 HOH B 48 548 470 HOH HOH . I 4 HOH B 49 549 472 HOH HOH . I 4 HOH B 50 550 473 HOH HOH . I 4 HOH B 51 551 474 HOH HOH . I 4 HOH B 52 552 479 HOH HOH . I 4 HOH B 53 553 481 HOH HOH . I 4 HOH B 54 554 482 HOH HOH . I 4 HOH B 55 555 483 HOH HOH . I 4 HOH B 56 556 484 HOH HOH . I 4 HOH B 57 557 487 HOH HOH . I 4 HOH B 58 558 491 HOH HOH . I 4 HOH B 59 559 495 HOH HOH . I 4 HOH B 60 560 498 HOH HOH . I 4 HOH B 61 561 500 HOH HOH . I 4 HOH B 62 562 502 HOH HOH . I 4 HOH B 63 563 503 HOH HOH . I 4 HOH B 64 564 506 HOH HOH . I 4 HOH B 65 565 507 HOH HOH . I 4 HOH B 66 566 508 HOH HOH . I 4 HOH B 67 567 510 HOH HOH . I 4 HOH B 68 568 511 HOH HOH . I 4 HOH B 69 569 512 HOH HOH . I 4 HOH B 70 570 513 HOH HOH . I 4 HOH B 71 571 514 HOH HOH . I 4 HOH B 72 572 519 HOH HOH . I 4 HOH B 73 573 521 HOH HOH . I 4 HOH B 74 574 524 HOH HOH . I 4 HOH B 75 575 526 HOH HOH . I 4 HOH B 76 576 527 HOH HOH . I 4 HOH B 77 577 528 HOH HOH . I 4 HOH B 78 578 530 HOH HOH . I 4 HOH B 79 579 533 HOH HOH . I 4 HOH B 80 580 534 HOH HOH . I 4 HOH B 81 581 537 HOH HOH . I 4 HOH B 82 582 549 HOH HOH . I 4 HOH B 83 583 551 HOH HOH . I 4 HOH B 84 584 552 HOH HOH . I 4 HOH B 85 585 553 HOH HOH . I 4 HOH B 86 586 554 HOH HOH . I 4 HOH B 87 587 564 HOH HOH . I 4 HOH B 88 588 565 HOH HOH . I 4 HOH B 89 589 566 HOH HOH . I 4 HOH B 90 590 567 HOH HOH . I 4 HOH B 91 591 568 HOH HOH . I 4 HOH B 92 592 570 HOH HOH . I 4 HOH B 93 593 571 HOH HOH . I 4 HOH B 94 594 572 HOH HOH . I 4 HOH B 95 595 575 HOH HOH . I 4 HOH B 96 596 576 HOH HOH . I 4 HOH B 97 597 577 HOH HOH . I 4 HOH B 98 598 578 HOH HOH . I 4 HOH B 99 599 580 HOH HOH . I 4 HOH B 100 600 583 HOH HOH . I 4 HOH B 101 601 584 HOH HOH . I 4 HOH B 102 602 585 HOH HOH . I 4 HOH B 103 603 591 HOH HOH . I 4 HOH B 104 604 592 HOH HOH . I 4 HOH B 105 605 593 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . D 3 22.789 0.341 8.049 1 63.72 ? C1 PEG 402 A 1 HETATM 2 O O1 PEG . . . D 3 21.807 0.068 7.061 1 65.07 ? O1 PEG 402 A 1 HETATM 3 C C2 PEG . . . D 3 22.663 1.727 8.601 1 61.69 ? C2 PEG 402 A 1 HETATM 4 O O2 PEG . . . D 3 23.888 2.119 9.206 1 60.63 ? O2 PEG 402 A 1 HETATM 5 C C3 PEG . . . D 3 24.389 3.353 8.711 1 59.99 ? C3 PEG 402 A 1 HETATM 6 C C4 PEG . . . D 3 25.844 3.499 9.026 1 59.87 ? C4 PEG 402 A 1 HETATM 7 O O4 PEG . . . D 3 26.674 2.9 8.043 1 61.47 ? O4 PEG 402 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #