data_4QT3 # _model_server_result.job_id BSRdw6rmX0eMiEYSUhctdA _model_server_result.datetime_utc '2024-12-15 19:43:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qt3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 4QT3 # _exptl.entry_id 4QT3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.251 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4QT3 _cell.length_a 49.476 _cell.length_b 50.157 _cell.length_c 57.813 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QT3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 102 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 106 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id S1 _struct_conn.ptnr2_label_comp_id DTV _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id DTV _struct_conn.ptnr2_auth_seq_id 201 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.021 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C4 H10 O2 S2' _chem_comp.formula_weight 154.251 _chem_comp.id DTV _chem_comp.mon_nstd_flag . _chem_comp.name (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1 C1 DTV sing 83 n n S1 H1 DTV sing 84 n n C1 C2 DTV sing 85 n n C1 H1C1 DTV sing 86 n n C1 H1C2 DTV sing 87 n n C2 O2 DTV sing 88 n n C2 C3 DTV sing 89 n n C2 H2 DTV sing 90 n n O2 HA DTV sing 91 n n C3 O3 DTV sing 92 n n C3 C4 DTV sing 93 n n C3 H3 DTV sing 94 n n O3 HB DTV sing 95 n n C4 S4 DTV sing 96 n n C4 H4C1 DTV sing 97 n n C4 H4C2 DTV sing 98 n n S4 H4 DTV sing 99 n n # _atom_sites.entry_id 4QT3 _atom_sites.fract_transf_matrix[1][1] 0.020212 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019937 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017297 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DTV A 1 201 106 DTV PDB . C 3 RAP A 1 202 1 RAP RAP . D 4 HOH A 1 301 1 HOH HOH . D 4 HOH A 2 302 2 HOH HOH . D 4 HOH A 3 303 3 HOH HOH . D 4 HOH A 4 304 4 HOH HOH . D 4 HOH A 5 305 5 HOH HOH . D 4 HOH A 6 306 6 HOH HOH . D 4 HOH A 7 307 7 HOH HOH . D 4 HOH A 8 308 9 HOH HOH . D 4 HOH A 9 309 10 HOH HOH . D 4 HOH A 10 310 11 HOH HOH . D 4 HOH A 11 311 12 HOH HOH . D 4 HOH A 12 312 13 HOH HOH . D 4 HOH A 13 313 14 HOH HOH . D 4 HOH A 14 314 15 HOH HOH . D 4 HOH A 15 315 16 HOH HOH . D 4 HOH A 16 316 17 HOH HOH . D 4 HOH A 17 317 18 HOH HOH . D 4 HOH A 18 318 19 HOH HOH . D 4 HOH A 19 319 20 HOH HOH . D 4 HOH A 20 320 21 HOH HOH . D 4 HOH A 21 321 22 HOH HOH . D 4 HOH A 22 322 23 HOH HOH . D 4 HOH A 23 323 24 HOH HOH . D 4 HOH A 24 324 25 HOH HOH . D 4 HOH A 25 325 26 HOH HOH . D 4 HOH A 26 326 27 HOH HOH . D 4 HOH A 27 327 28 HOH HOH . D 4 HOH A 28 328 29 HOH HOH . D 4 HOH A 29 329 30 HOH HOH . D 4 HOH A 30 330 31 HOH HOH . D 4 HOH A 31 331 32 HOH HOH . D 4 HOH A 32 332 33 HOH HOH . D 4 HOH A 33 333 35 HOH HOH . D 4 HOH A 34 334 36 HOH HOH . D 4 HOH A 35 335 37 HOH HOH . D 4 HOH A 36 336 38 HOH HOH . D 4 HOH A 37 337 39 HOH HOH . D 4 HOH A 38 338 40 HOH HOH . D 4 HOH A 39 339 41 HOH HOH . D 4 HOH A 40 340 42 HOH HOH . D 4 HOH A 41 341 43 HOH HOH . D 4 HOH A 42 342 44 HOH HOH . D 4 HOH A 43 343 45 HOH HOH . D 4 HOH A 44 344 46 HOH HOH . D 4 HOH A 45 345 47 HOH HOH . D 4 HOH A 46 346 49 HOH HOH . D 4 HOH A 47 347 50 HOH HOH . D 4 HOH A 48 348 51 HOH HOH . D 4 HOH A 49 349 52 HOH HOH . D 4 HOH A 50 350 53 HOH HOH . D 4 HOH A 51 351 54 HOH HOH . D 4 HOH A 52 352 55 HOH HOH . D 4 HOH A 53 353 56 HOH HOH . D 4 HOH A 54 354 57 HOH HOH . D 4 HOH A 55 355 58 HOH HOH . D 4 HOH A 56 356 59 HOH HOH . D 4 HOH A 57 357 60 HOH HOH . D 4 HOH A 58 358 61 HOH HOH . D 4 HOH A 59 359 62 HOH HOH . D 4 HOH A 60 360 63 HOH HOH . D 4 HOH A 61 361 64 HOH HOH . D 4 HOH A 62 362 65 HOH HOH . D 4 HOH A 63 363 66 HOH HOH . D 4 HOH A 64 364 67 HOH HOH . D 4 HOH A 65 365 68 HOH HOH . D 4 HOH A 66 366 69 HOH HOH . D 4 HOH A 67 367 70 HOH HOH . D 4 HOH A 68 368 71 HOH HOH . D 4 HOH A 69 369 72 HOH HOH . D 4 HOH A 70 370 73 HOH HOH . D 4 HOH A 71 371 74 HOH HOH . D 4 HOH A 72 372 75 HOH HOH . D 4 HOH A 73 373 76 HOH HOH . D 4 HOH A 74 374 77 HOH HOH . D 4 HOH A 75 375 78 HOH HOH . D 4 HOH A 76 376 79 HOH HOH . D 4 HOH A 77 377 80 HOH HOH . D 4 HOH A 78 378 81 HOH HOH . D 4 HOH A 79 379 82 HOH HOH . D 4 HOH A 80 380 83 HOH HOH . D 4 HOH A 81 381 84 HOH HOH . D 4 HOH A 82 382 85 HOH HOH . D 4 HOH A 83 383 86 HOH HOH . D 4 HOH A 84 384 87 HOH HOH . D 4 HOH A 85 385 88 HOH HOH . D 4 HOH A 86 386 89 HOH HOH . D 4 HOH A 87 387 90 HOH HOH . D 4 HOH A 88 388 91 HOH HOH . D 4 HOH A 89 389 92 HOH HOH . D 4 HOH A 90 390 93 HOH HOH . D 4 HOH A 91 391 95 HOH HOH . D 4 HOH A 92 392 96 HOH HOH . D 4 HOH A 93 393 97 HOH HOH . D 4 HOH A 94 394 98 HOH HOH . D 4 HOH A 95 395 99 HOH HOH . D 4 HOH A 96 396 100 HOH HOH . D 4 HOH A 97 397 101 HOH HOH . D 4 HOH A 98 398 102 HOH HOH . D 4 HOH A 99 399 103 HOH HOH . D 4 HOH A 100 400 104 HOH HOH . D 4 HOH A 101 401 105 HOH HOH . D 4 HOH A 102 402 106 HOH HOH . D 4 HOH A 103 403 107 HOH HOH . D 4 HOH A 104 404 111 HOH HOH . D 4 HOH A 105 405 112 HOH HOH . D 4 HOH A 106 406 113 HOH HOH . D 4 HOH A 107 407 114 HOH HOH . D 4 HOH A 108 408 115 HOH HOH . D 4 HOH A 109 409 117 HOH HOH . D 4 HOH A 110 410 119 HOH HOH . D 4 HOH A 111 411 120 HOH HOH . D 4 HOH A 112 412 122 HOH HOH . D 4 HOH A 113 413 123 HOH HOH . D 4 HOH A 114 414 124 HOH HOH . D 4 HOH A 115 415 126 HOH HOH . D 4 HOH A 116 416 127 HOH HOH . D 4 HOH A 117 417 128 HOH HOH . D 4 HOH A 118 418 130 HOH HOH . D 4 HOH A 119 419 131 HOH HOH . D 4 HOH A 120 420 132 HOH HOH . D 4 HOH A 121 421 133 HOH HOH . D 4 HOH A 122 422 134 HOH HOH . D 4 HOH A 123 423 135 HOH HOH . D 4 HOH A 124 424 136 HOH HOH . D 4 HOH A 125 425 137 HOH HOH . D 4 HOH A 126 426 139 HOH HOH . D 4 HOH A 127 427 140 HOH HOH . D 4 HOH A 128 428 142 HOH HOH . D 4 HOH A 129 429 143 HOH HOH . D 4 HOH A 130 430 144 HOH HOH . D 4 HOH A 131 431 145 HOH HOH . D 4 HOH A 132 432 146 HOH HOH . D 4 HOH A 133 433 147 HOH HOH . D 4 HOH A 134 434 148 HOH HOH . D 4 HOH A 135 435 149 HOH HOH . D 4 HOH A 136 436 152 HOH HOH . D 4 HOH A 137 437 153 HOH HOH . D 4 HOH A 138 438 154 HOH HOH . D 4 HOH A 139 439 155 HOH HOH . D 4 HOH A 140 440 156 HOH HOH . D 4 HOH A 141 441 157 HOH HOH . D 4 HOH A 142 442 158 HOH HOH . D 4 HOH A 143 443 159 HOH HOH . D 4 HOH A 144 444 160 HOH HOH . D 4 HOH A 145 445 161 HOH HOH . D 4 HOH A 146 446 162 HOH HOH . D 4 HOH A 147 447 163 HOH HOH . D 4 HOH A 148 448 164 HOH HOH . D 4 HOH A 149 449 165 HOH HOH . D 4 HOH A 150 450 166 HOH HOH . D 4 HOH A 151 451 167 HOH HOH . D 4 HOH A 152 452 168 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 DTV . . . B 2 11.777 6.324 -6.668 0.5 32.63 ? S1 DTV 201 A 1 HETATM 2 C C1 DTV . . . B 2 13.022 5.885 -5.444 0.5 32.59 ? C1 DTV 201 A 1 HETATM 3 C C2 DTV . . . B 2 14.247 6.77 -5.621 0.5 34.35 ? C2 DTV 201 A 1 HETATM 4 O O2 DTV . . . B 2 13.986 7.869 -6.488 0.5 30.34 ? O2 DTV 201 A 1 HETATM 5 C C3 DTV . . . B 2 14.599 7.292 -4.243 0.5 34.97 ? C3 DTV 201 A 1 HETATM 6 O O3 DTV . . . B 2 15.978 7.646 -4.175 0.5 37.13 ? O3 DTV 201 A 1 HETATM 7 C C4 DTV . . . B 2 14.273 6.248 -3.214 0.5 35.2 ? C4 DTV 201 A 1 HETATM 8 S S4 DTV . . . B 2 12.511 5.758 -3.315 0.5 44.48 ? S4 DTV 201 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 8 #