data_4QUB # _model_server_result.job_id ZrsvGx5fUduGLraEeaDP7g _model_server_result.datetime_utc '2025-01-10 13:03:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qub # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 4QUB # _exptl.entry_id 4QUB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 42.02 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'AZIDE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4QUB _cell.length_a 68.728 _cell.length_b 84.423 _cell.length_c 96.33 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QUB _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_577 x,-y+2,-z+2 1 0 0 0 -1 0 0 0 -1 0 168.846 192.66 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ACE 1 D ACE 1 1_555 B N ASP 2 D ASP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 sing covale ? covale2 B C ASP 5 D ASP 5 1_555 B C1 0QE 6 D 0QE 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.491 sing # _chem_comp.formula 'N3 -1' _chem_comp.formula_weight 42.02 _chem_comp.id AZI _chem_comp.mon_nstd_flag . _chem_comp.name 'AZIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 N2 AZI doub 80 n n N2 N3 AZI doub 81 n n # _atom_sites.entry_id 4QUB _atom_sites.fract_transf_matrix[1][1] 0.01455 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011845 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010381 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 AZI A 1 301 505 AZI AZI . D 3 AZI A 1 302 506 AZI AZI . E 3 AZI A 1 303 507 AZI AZI . F 3 AZI A 1 304 508 AZI AZI . G 3 AZI A 1 305 509 AZI AZI . H 4 HOH A 1 401 1 HOH HOH . H 4 HOH A 2 402 2 HOH HOH . H 4 HOH A 3 403 3 HOH HOH . H 4 HOH A 4 404 4 HOH HOH . H 4 HOH A 5 405 5 HOH HOH . H 4 HOH A 6 406 6 HOH HOH . H 4 HOH A 7 407 7 HOH HOH . H 4 HOH A 8 408 8 HOH HOH . H 4 HOH A 9 409 9 HOH HOH . H 4 HOH A 10 410 10 HOH HOH . H 4 HOH A 11 411 11 HOH HOH . H 4 HOH A 12 412 12 HOH HOH . H 4 HOH A 13 413 13 HOH HOH . H 4 HOH A 14 414 14 HOH HOH . H 4 HOH A 15 415 15 HOH HOH . H 4 HOH A 16 416 16 HOH HOH . H 4 HOH A 17 417 17 HOH HOH . H 4 HOH A 18 418 18 HOH HOH . H 4 HOH A 19 419 19 HOH HOH . H 4 HOH A 20 420 20 HOH HOH . H 4 HOH A 21 421 21 HOH HOH . H 4 HOH A 22 422 22 HOH HOH . H 4 HOH A 23 423 23 HOH HOH . H 4 HOH A 24 424 24 HOH HOH . H 4 HOH A 25 425 25 HOH HOH . H 4 HOH A 26 426 26 HOH HOH . H 4 HOH A 27 427 27 HOH HOH . H 4 HOH A 28 428 28 HOH HOH . H 4 HOH A 29 429 29 HOH HOH . H 4 HOH A 30 430 30 HOH HOH . H 4 HOH A 31 431 31 HOH HOH . H 4 HOH A 32 432 32 HOH HOH . H 4 HOH A 33 433 33 HOH HOH . H 4 HOH A 34 434 35 HOH HOH . H 4 HOH A 35 435 36 HOH HOH . H 4 HOH A 36 436 37 HOH HOH . H 4 HOH A 37 437 38 HOH HOH . H 4 HOH A 38 438 39 HOH HOH . H 4 HOH A 39 439 40 HOH HOH . H 4 HOH A 40 440 41 HOH HOH . H 4 HOH A 41 441 42 HOH HOH . H 4 HOH A 42 442 44 HOH HOH . H 4 HOH A 43 443 45 HOH HOH . H 4 HOH A 44 444 46 HOH HOH . H 4 HOH A 45 445 47 HOH HOH . H 4 HOH A 46 446 48 HOH HOH . H 4 HOH A 47 447 49 HOH HOH . H 4 HOH A 48 448 50 HOH HOH . H 4 HOH A 49 449 51 HOH HOH . H 4 HOH A 50 450 52 HOH HOH . H 4 HOH A 51 451 53 HOH HOH . H 4 HOH A 52 452 54 HOH HOH . H 4 HOH A 53 453 55 HOH HOH . H 4 HOH A 54 454 56 HOH HOH . H 4 HOH A 55 455 57 HOH HOH . H 4 HOH A 56 456 59 HOH HOH . H 4 HOH A 57 457 60 HOH HOH . H 4 HOH A 58 458 61 HOH HOH . H 4 HOH A 59 459 62 HOH HOH . H 4 HOH A 60 460 63 HOH HOH . H 4 HOH A 61 461 64 HOH HOH . H 4 HOH A 62 462 65 HOH HOH . H 4 HOH A 63 463 66 HOH HOH . H 4 HOH A 64 464 67 HOH HOH . H 4 HOH A 65 465 68 HOH HOH . H 4 HOH A 66 466 69 HOH HOH . H 4 HOH A 67 467 70 HOH HOH . H 4 HOH A 68 468 71 HOH HOH . H 4 HOH A 69 469 72 HOH HOH . H 4 HOH A 70 470 73 HOH HOH . H 4 HOH A 71 471 74 HOH HOH . H 4 HOH A 72 472 75 HOH HOH . H 4 HOH A 73 473 76 HOH HOH . H 4 HOH A 74 474 77 HOH HOH . H 4 HOH A 75 475 79 HOH HOH . H 4 HOH A 76 476 80 HOH HOH . H 4 HOH A 77 477 81 HOH HOH . H 4 HOH A 78 478 82 HOH HOH . H 4 HOH A 79 479 83 HOH HOH . H 4 HOH A 80 480 84 HOH HOH . H 4 HOH A 81 481 85 HOH HOH . H 4 HOH A 82 482 87 HOH HOH . H 4 HOH A 83 483 89 HOH HOH . H 4 HOH A 84 484 90 HOH HOH . H 4 HOH A 85 485 91 HOH HOH . H 4 HOH A 86 486 93 HOH HOH . H 4 HOH A 87 487 94 HOH HOH . H 4 HOH A 88 488 96 HOH HOH . H 4 HOH A 89 489 97 HOH HOH . H 4 HOH A 90 490 98 HOH HOH . H 4 HOH A 91 491 99 HOH HOH . H 4 HOH A 92 492 100 HOH HOH . H 4 HOH A 93 493 101 HOH HOH . H 4 HOH A 94 494 102 HOH HOH . H 4 HOH A 95 495 103 HOH HOH . H 4 HOH A 96 496 104 HOH HOH . H 4 HOH A 97 497 105 HOH HOH . H 4 HOH A 98 498 107 HOH HOH . H 4 HOH A 99 499 108 HOH HOH . H 4 HOH A 100 500 109 HOH HOH . H 4 HOH A 101 501 110 HOH HOH . H 4 HOH A 102 502 111 HOH HOH . H 4 HOH A 103 503 112 HOH HOH . H 4 HOH A 104 504 113 HOH HOH . H 4 HOH A 105 505 114 HOH HOH . H 4 HOH A 106 506 115 HOH HOH . H 4 HOH A 107 507 116 HOH HOH . H 4 HOH A 108 508 117 HOH HOH . H 4 HOH A 109 509 118 HOH HOH . H 4 HOH A 110 510 119 HOH HOH . H 4 HOH A 111 511 120 HOH HOH . H 4 HOH A 112 512 122 HOH HOH . H 4 HOH A 113 513 123 HOH HOH . H 4 HOH A 114 514 124 HOH HOH . H 4 HOH A 115 515 125 HOH HOH . H 4 HOH A 116 516 126 HOH HOH . H 4 HOH A 117 517 130 HOH HOH . H 4 HOH A 118 518 131 HOH HOH . H 4 HOH A 119 519 132 HOH HOH . H 4 HOH A 120 520 134 HOH HOH . H 4 HOH A 121 521 135 HOH HOH . H 4 HOH A 122 522 136 HOH HOH . H 4 HOH A 123 523 137 HOH HOH . H 4 HOH A 124 524 138 HOH HOH . H 4 HOH A 125 525 140 HOH HOH . H 4 HOH A 126 526 141 HOH HOH . H 4 HOH A 127 527 142 HOH HOH . H 4 HOH A 128 528 143 HOH HOH . H 4 HOH A 129 529 144 HOH HOH . H 4 HOH A 130 530 145 HOH HOH . H 4 HOH A 131 531 146 HOH HOH . H 4 HOH A 132 532 147 HOH HOH . H 4 HOH A 133 533 148 HOH HOH . H 4 HOH A 134 534 149 HOH HOH . H 4 HOH A 135 535 150 HOH HOH . H 4 HOH A 136 536 151 HOH HOH . H 4 HOH A 137 537 152 HOH HOH . H 4 HOH A 138 538 153 HOH HOH . H 4 HOH A 139 539 154 HOH HOH . H 4 HOH A 140 540 155 HOH HOH . H 4 HOH A 141 541 156 HOH HOH . H 4 HOH A 142 542 157 HOH HOH . H 4 HOH A 143 543 158 HOH HOH . H 4 HOH A 144 544 160 HOH HOH . H 4 HOH A 145 545 161 HOH HOH . H 4 HOH A 146 546 162 HOH HOH . H 4 HOH A 147 547 164 HOH HOH . H 4 HOH A 148 548 167 HOH HOH . H 4 HOH A 149 549 169 HOH HOH . H 4 HOH A 150 550 171 HOH HOH . H 4 HOH A 151 551 172 HOH HOH . H 4 HOH A 152 552 173 HOH HOH . H 4 HOH A 153 553 174 HOH HOH . H 4 HOH A 154 554 175 HOH HOH . H 4 HOH A 155 555 176 HOH HOH . H 4 HOH A 156 556 177 HOH HOH . H 4 HOH A 157 557 178 HOH HOH . H 4 HOH A 158 558 179 HOH HOH . H 4 HOH A 159 559 180 HOH HOH . H 4 HOH A 160 560 182 HOH HOH . H 4 HOH A 161 561 183 HOH HOH . H 4 HOH A 162 562 185 HOH HOH . H 4 HOH A 163 563 187 HOH HOH . H 4 HOH A 164 564 190 HOH HOH . H 4 HOH A 165 565 191 HOH HOH . H 4 HOH A 166 566 192 HOH HOH . H 4 HOH A 167 567 193 HOH HOH . H 4 HOH A 168 568 195 HOH HOH . H 4 HOH A 169 569 196 HOH HOH . H 4 HOH A 170 570 197 HOH HOH . H 4 HOH A 171 571 198 HOH HOH . H 4 HOH A 172 572 199 HOH HOH . H 4 HOH A 173 573 200 HOH HOH . H 4 HOH A 174 574 203 HOH HOH . H 4 HOH A 175 575 204 HOH HOH . H 4 HOH A 176 576 205 HOH HOH . H 4 HOH A 177 577 208 HOH HOH . H 4 HOH A 178 578 209 HOH HOH . H 4 HOH A 179 579 210 HOH HOH . H 4 HOH A 180 580 211 HOH HOH . H 4 HOH A 181 581 212 HOH HOH . H 4 HOH A 182 582 213 HOH HOH . H 4 HOH A 183 583 214 HOH HOH . H 4 HOH A 184 584 215 HOH HOH . H 4 HOH A 185 585 216 HOH HOH . H 4 HOH A 186 586 217 HOH HOH . H 4 HOH A 187 587 218 HOH HOH . H 4 HOH A 188 588 219 HOH HOH . H 4 HOH A 189 589 220 HOH HOH . H 4 HOH A 190 590 221 HOH HOH . H 4 HOH A 191 591 222 HOH HOH . H 4 HOH A 192 592 223 HOH HOH . H 4 HOH A 193 593 224 HOH HOH . H 4 HOH A 194 594 225 HOH HOH . H 4 HOH A 195 595 226 HOH HOH . H 4 HOH A 196 596 227 HOH HOH . H 4 HOH A 197 597 228 HOH HOH . H 4 HOH A 198 598 229 HOH HOH . H 4 HOH A 199 599 230 HOH HOH . H 4 HOH A 200 600 231 HOH HOH . H 4 HOH A 201 601 232 HOH HOH . H 4 HOH A 202 602 233 HOH HOH . H 4 HOH A 203 603 234 HOH HOH . H 4 HOH A 204 604 235 HOH HOH . H 4 HOH A 205 605 238 HOH HOH . H 4 HOH A 206 606 239 HOH HOH . H 4 HOH A 207 607 240 HOH HOH . H 4 HOH A 208 608 242 HOH HOH . H 4 HOH A 209 609 243 HOH HOH . H 4 HOH A 210 610 244 HOH HOH . H 4 HOH A 211 611 245 HOH HOH . H 4 HOH A 212 612 247 HOH HOH . H 4 HOH A 213 613 248 HOH HOH . H 4 HOH A 214 614 249 HOH HOH . H 4 HOH A 215 615 250 HOH HOH . H 4 HOH A 216 616 251 HOH HOH . H 4 HOH A 217 617 252 HOH HOH . H 4 HOH A 218 618 253 HOH HOH . H 4 HOH A 219 619 254 HOH HOH . H 4 HOH A 220 620 255 HOH HOH . H 4 HOH A 221 621 257 HOH HOH . H 4 HOH A 222 622 258 HOH HOH . H 4 HOH A 223 623 259 HOH HOH . H 4 HOH A 224 624 262 HOH HOH . H 4 HOH A 225 625 264 HOH HOH . H 4 HOH A 226 626 265 HOH HOH . H 4 HOH A 227 627 266 HOH HOH . H 4 HOH A 228 628 269 HOH HOH . H 4 HOH A 229 629 270 HOH HOH . H 4 HOH A 230 630 271 HOH HOH . H 4 HOH A 231 631 272 HOH HOH . H 4 HOH A 232 632 273 HOH HOH . H 4 HOH A 233 633 275 HOH HOH . H 4 HOH A 234 634 276 HOH HOH . H 4 HOH A 235 635 277 HOH HOH . H 4 HOH A 236 636 278 HOH HOH . H 4 HOH A 237 637 279 HOH HOH . H 4 HOH A 238 638 280 HOH HOH . H 4 HOH A 239 639 281 HOH HOH . H 4 HOH A 240 640 282 HOH HOH . H 4 HOH A 241 641 284 HOH HOH . H 4 HOH A 242 642 285 HOH HOH . H 4 HOH A 243 643 287 HOH HOH . H 4 HOH A 244 644 288 HOH HOH . H 4 HOH A 245 645 289 HOH HOH . H 4 HOH A 246 646 290 HOH HOH . H 4 HOH A 247 647 291 HOH HOH . H 4 HOH A 248 648 293 HOH HOH . H 4 HOH A 249 649 294 HOH HOH . H 4 HOH A 250 650 295 HOH HOH . H 4 HOH A 251 651 296 HOH HOH . H 4 HOH A 252 652 297 HOH HOH . H 4 HOH A 253 653 298 HOH HOH . H 4 HOH A 254 654 299 HOH HOH . H 4 HOH A 255 655 300 HOH HOH . H 4 HOH A 256 656 301 HOH HOH . H 4 HOH A 257 657 302 HOH HOH . H 4 HOH A 258 658 303 HOH HOH . H 4 HOH A 259 659 304 HOH HOH . H 4 HOH A 260 660 305 HOH HOH . H 4 HOH A 261 661 306 HOH HOH . H 4 HOH A 262 662 307 HOH HOH . H 4 HOH A 263 663 308 HOH HOH . H 4 HOH A 264 664 309 HOH HOH . H 4 HOH A 265 665 310 HOH HOH . H 4 HOH A 266 666 311 HOH HOH . H 4 HOH A 267 667 312 HOH HOH . H 4 HOH A 268 668 313 HOH HOH . H 4 HOH A 269 669 314 HOH HOH . H 4 HOH A 270 670 315 HOH HOH . I 4 HOH D 1 101 92 HOH HOH . I 4 HOH D 2 102 163 HOH HOH . I 4 HOH D 3 103 86 HOH HOH . I 4 HOH D 4 104 166 HOH HOH . I 4 HOH D 5 105 168 HOH HOH . I 4 HOH D 6 106 237 HOH HOH . I 4 HOH D 7 107 261 HOH HOH . I 4 HOH D 8 108 263 HOH HOH . I 4 HOH D 9 109 292 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 AZI . . . D 3 1.124 96.642 117.803 1 32.59 ? N1 AZI 302 A 1 HETATM 2 N N2 AZI . . . D 3 2.201 96.901 117.727 1 35.86 ? N2 AZI 302 A 1 HETATM 3 N N3 AZI . . . D 3 3.264 97.161 117.665 1 38.35 ? N3 AZI 302 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 3 #