data_4QVN # _model_server_result.job_id 3edrfKK_W8GMxNsVm-cuFQ _model_server_result.datetime_utc '2024-11-24 14:17:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qvn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"JA","auth_seq_id":303}' # _entry.id 4QVN # _exptl.entry_id 4QVN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 15 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.09 _cell.angle_gamma 90 _cell.entry_id 4QVN _cell.length_a 134.9 _cell.length_b 300.78 _cell.length_c 145.16 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QVN _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 28-meric _pdbx_struct_assembly.oligomeric_count 28 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 15 CA N N ? 15 FA N N ? 15 GA N N ? 15 IA N N ? 15 JA N N ? 15 LA N N ? 15 QA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 H OG1 THR 1 H THR 1 1_555 EA B26 BO2 . H BO2 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale2 K OG1 THR 1 K THR 1 1_555 HA B26 BO2 . K BO2 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale3 N OG1 THR 1 N THR 1 1_555 KA B26 BO2 . N BO2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale4 V OG1 THR 1 V THR 1 1_555 OA B26 BO2 . V BO2 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale5 Y OG1 THR 1 Y THR 1 1_555 PA B26 BO2 . Y BO2 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale6 BA OG1 THR 1 b THR 1 1_555 RA B26 BO2 . b BO2 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? metalc ? metalc1 G OG1 THR 17 G THR 8 1_555 CA MG MG . G MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? metalc ? metalc2 G O ARG 131 G ARG 122 1_555 CA MG MG . G MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.655 ? metalc ? metalc3 G O MET 134 G MET 125 1_555 CA MG MG . G MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc4 I O ALA 175 I ALA 174 1_555 FA MG MG . I MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.996 ? metalc ? metalc5 I O ASP 178 I ASP 177 1_555 FA MG MG . I MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc6 I O SER 181 I SER 180 1_555 FA MG MG . I MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? metalc ? metalc7 K O ILE 82 K ILE 82 1_555 JA MG MG . K MG 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.874 ? metalc ? metalc8 K O ALA 165 K ALA 165 1_555 IA MG MG . K MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc9 K O ASP 168 K ASP 168 1_555 IA MG MG . K MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc10 K O SER 171 K SER 171 1_555 IA MG MG . K MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.936 ? metalc ? metalc11 IA MG MG . K MG 302 1_555 W O ASP 205 W ASP 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc12 N O ILE 163 N ILE 163 1_555 LA MG MG . N MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? metalc ? metalc13 N O ASP 166 N ASP 166 1_555 LA MG MG . N MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.87 ? metalc ? metalc14 N O SER 169 N SER 169 1_555 LA MG MG . N MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc15 Z O THR 192 Z THR 192 1_555 QA MG MG . Z MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.6 ? metalc ? metalc16 Z O HIS 195 Z HIS 195 1_555 QA MG MG . Z MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? metalc ? metalc17 Z O VAL 198 Z VAL 198 1_555 QA MG MG . Z MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4QVN _atom_sites.fract_transf_matrix[1][1] 0.007413 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00316 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003325 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007489 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code CA 15 MG G 1 301 5 MG MG . DA 16 CL G 1 302 1 CL CL . EA 17 BO2 H 1 301 1 BO2 BO2 . FA 15 MG I 1 301 6 MG MG . GA 15 MG J 1 201 7 MG MG . HA 17 BO2 K 1 301 1 BO2 BO2 . IA 15 MG K 1 302 1 MG MG . JA 15 MG K 1 303 4 MG MG . KA 17 BO2 N 1 201 1 BO2 BO2 . LA 15 MG N 1 202 3 MG MG . MA 16 CL N 1 203 3 CL CL . NA 16 CL U 1 301 2 CL CL . OA 17 BO2 V 1 301 1 BO2 BO2 . PA 17 BO2 Y 1 301 1 BO2 BO2 . QA 15 MG Z 1 301 2 MG MG . RA 17 BO2 b 1 201 1 BO2 BO2 . SA 16 CL b 1 202 4 CL CL . TA 18 HOH A 1 301 18 HOH HOH . TA 18 HOH A 2 302 41 HOH HOH . TA 18 HOH A 3 303 105 HOH HOH . TA 18 HOH A 4 304 144 HOH HOH . TA 18 HOH A 5 305 197 HOH HOH . UA 18 HOH B 1 301 23 HOH HOH . UA 18 HOH B 2 302 33 HOH HOH . UA 18 HOH B 3 303 115 HOH HOH . UA 18 HOH B 4 304 134 HOH HOH . UA 18 HOH B 5 305 147 HOH HOH . UA 18 HOH B 6 306 150 HOH HOH . UA 18 HOH B 7 307 155 HOH HOH . UA 18 HOH B 8 308 182 HOH HOH . UA 18 HOH B 9 309 194 HOH HOH . VA 18 HOH C 1 301 37 HOH HOH . VA 18 HOH C 2 302 46 HOH HOH . VA 18 HOH C 3 303 112 HOH HOH . VA 18 HOH C 4 304 122 HOH HOH . VA 18 HOH C 5 305 157 HOH HOH . WA 18 HOH D 1 301 30 HOH HOH . WA 18 HOH D 2 302 93 HOH HOH . WA 18 HOH D 3 303 169 HOH HOH . WA 18 HOH D 4 304 187 HOH HOH . XA 18 HOH E 1 301 20 HOH HOH . XA 18 HOH E 2 302 118 HOH HOH . XA 18 HOH E 3 303 133 HOH HOH . XA 18 HOH E 4 304 154 HOH HOH . XA 18 HOH E 5 305 156 HOH HOH . XA 18 HOH E 6 306 176 HOH HOH . YA 18 HOH F 1 301 12 HOH HOH . YA 18 HOH F 2 302 67 HOH HOH . YA 18 HOH F 3 303 69 HOH HOH . YA 18 HOH F 4 304 72 HOH HOH . ZA 18 HOH G 1 401 11 HOH HOH . ZA 18 HOH G 2 402 32 HOH HOH . ZA 18 HOH G 3 403 88 HOH HOH . ZA 18 HOH G 4 404 161 HOH HOH . ZA 18 HOH G 5 405 173 HOH HOH . ZA 18 HOH G 6 406 196 HOH HOH . AB 18 HOH H 1 401 50 HOH HOH . AB 18 HOH H 2 402 55 HOH HOH . AB 18 HOH H 3 403 63 HOH HOH . AB 18 HOH H 4 404 79 HOH HOH . AB 18 HOH H 5 405 106 HOH HOH . AB 18 HOH H 6 406 153 HOH HOH . AB 18 HOH H 7 407 160 HOH HOH . AB 18 HOH H 8 408 164 HOH HOH . AB 18 HOH H 9 409 186 HOH HOH . BB 18 HOH I 1 401 77 HOH HOH . BB 18 HOH I 2 402 94 HOH HOH . BB 18 HOH I 3 403 108 HOH HOH . BB 18 HOH I 4 404 162 HOH HOH . CB 18 HOH J 1 301 21 HOH HOH . CB 18 HOH J 2 302 26 HOH HOH . CB 18 HOH J 3 303 40 HOH HOH . CB 18 HOH J 4 304 64 HOH HOH . CB 18 HOH J 5 305 83 HOH HOH . CB 18 HOH J 6 306 84 HOH HOH . CB 18 HOH J 7 307 102 HOH HOH . CB 18 HOH J 8 308 172 HOH HOH . DB 18 HOH K 1 401 71 HOH HOH . DB 18 HOH K 2 402 95 HOH HOH . DB 18 HOH K 3 403 96 HOH HOH . DB 18 HOH K 4 404 124 HOH HOH . DB 18 HOH K 5 405 165 HOH HOH . DB 18 HOH K 6 406 175 HOH HOH . DB 18 HOH K 7 407 180 HOH HOH . DB 18 HOH K 8 408 189 HOH HOH . DB 18 HOH K 9 409 191 HOH HOH . EB 18 HOH L 1 301 10 HOH HOH . EB 18 HOH L 2 302 27 HOH HOH . EB 18 HOH L 3 303 44 HOH HOH . EB 18 HOH L 4 304 53 HOH HOH . EB 18 HOH L 5 305 60 HOH HOH . EB 18 HOH L 6 306 107 HOH HOH . EB 18 HOH L 7 307 123 HOH HOH . EB 18 HOH L 8 308 126 HOH HOH . EB 18 HOH L 9 309 129 HOH HOH . EB 18 HOH L 10 310 141 HOH HOH . EB 18 HOH L 11 311 146 HOH HOH . EB 18 HOH L 12 312 152 HOH HOH . EB 18 HOH L 13 313 163 HOH HOH . EB 18 HOH L 14 314 178 HOH HOH . FB 18 HOH M 1 301 1 HOH HOH . FB 18 HOH M 2 302 17 HOH HOH . FB 18 HOH M 3 303 25 HOH HOH . FB 18 HOH M 4 304 39 HOH HOH . FB 18 HOH M 5 305 78 HOH HOH . FB 18 HOH M 6 306 89 HOH HOH . FB 18 HOH M 7 307 91 HOH HOH . FB 18 HOH M 8 308 114 HOH HOH . FB 18 HOH M 9 309 117 HOH HOH . FB 18 HOH M 10 310 159 HOH HOH . FB 18 HOH M 11 311 170 HOH HOH . FB 18 HOH M 12 312 179 HOH HOH . FB 18 HOH M 13 313 185 HOH HOH . GB 18 HOH N 1 301 62 HOH HOH . GB 18 HOH N 2 302 70 HOH HOH . GB 18 HOH N 3 303 90 HOH HOH . GB 18 HOH N 4 304 138 HOH HOH . GB 18 HOH N 5 305 149 HOH HOH . GB 18 HOH N 6 306 190 HOH HOH . GB 18 HOH N 7 307 200 HOH HOH . HB 18 HOH O 1 301 57 HOH HOH . HB 18 HOH O 2 302 135 HOH HOH . IB 18 HOH P 1 301 13 HOH HOH . IB 18 HOH P 2 302 174 HOH HOH . IB 18 HOH P 3 303 181 HOH HOH . JB 18 HOH Q 1 301 38 HOH HOH . JB 18 HOH Q 2 302 43 HOH HOH . JB 18 HOH Q 3 303 45 HOH HOH . JB 18 HOH Q 4 304 47 HOH HOH . JB 18 HOH Q 5 305 61 HOH HOH . JB 18 HOH Q 6 306 66 HOH HOH . JB 18 HOH Q 7 307 101 HOH HOH . JB 18 HOH Q 8 308 116 HOH HOH . JB 18 HOH Q 9 309 184 HOH HOH . JB 18 HOH Q 10 310 195 HOH HOH . KB 18 HOH R 1 301 19 HOH HOH . KB 18 HOH R 2 302 82 HOH HOH . KB 18 HOH R 3 303 132 HOH HOH . KB 18 HOH R 4 304 139 HOH HOH . KB 18 HOH R 5 305 183 HOH HOH . LB 18 HOH S 1 301 58 HOH HOH . LB 18 HOH S 2 302 137 HOH HOH . MB 18 HOH T 1 301 24 HOH HOH . MB 18 HOH T 2 302 110 HOH HOH . MB 18 HOH T 3 303 128 HOH HOH . NB 18 HOH U 1 401 8 HOH HOH . NB 18 HOH U 2 402 42 HOH HOH . NB 18 HOH U 3 403 52 HOH HOH . NB 18 HOH U 4 404 125 HOH HOH . NB 18 HOH U 5 405 136 HOH HOH . NB 18 HOH U 6 406 166 HOH HOH . NB 18 HOH U 7 407 193 HOH HOH . OB 18 HOH V 1 401 5 HOH HOH . OB 18 HOH V 2 402 29 HOH HOH . OB 18 HOH V 3 403 56 HOH HOH . OB 18 HOH V 4 404 59 HOH HOH . OB 18 HOH V 5 405 76 HOH HOH . OB 18 HOH V 6 406 92 HOH HOH . OB 18 HOH V 7 407 113 HOH HOH . OB 18 HOH V 8 408 127 HOH HOH . OB 18 HOH V 9 409 131 HOH HOH . OB 18 HOH V 10 410 140 HOH HOH . OB 18 HOH V 11 411 145 HOH HOH . OB 18 HOH V 12 412 148 HOH HOH . OB 18 HOH V 13 413 198 HOH HOH . PB 18 HOH W 1 301 97 HOH HOH . PB 18 HOH W 2 302 103 HOH HOH . PB 18 HOH W 3 303 120 HOH HOH . PB 18 HOH W 4 304 151 HOH HOH . QB 18 HOH X 1 201 3 HOH HOH . QB 18 HOH X 2 202 28 HOH HOH . QB 18 HOH X 3 203 31 HOH HOH . QB 18 HOH X 4 204 49 HOH HOH . QB 18 HOH X 5 205 54 HOH HOH . QB 18 HOH X 6 206 75 HOH HOH . QB 18 HOH X 7 207 86 HOH HOH . QB 18 HOH X 8 208 130 HOH HOH . QB 18 HOH X 9 209 168 HOH HOH . RB 18 HOH Y 1 401 9 HOH HOH . RB 18 HOH Y 2 402 14 HOH HOH . RB 18 HOH Y 3 403 15 HOH HOH . RB 18 HOH Y 4 404 36 HOH HOH . RB 18 HOH Y 5 405 48 HOH HOH . RB 18 HOH Y 6 406 65 HOH HOH . RB 18 HOH Y 7 407 68 HOH HOH . RB 18 HOH Y 8 408 99 HOH HOH . RB 18 HOH Y 9 409 111 HOH HOH . RB 18 HOH Y 10 410 142 HOH HOH . RB 18 HOH Y 11 411 188 HOH HOH . RB 18 HOH Y 12 412 199 HOH HOH . SB 18 HOH Z 1 401 6 HOH HOH . SB 18 HOH Z 2 402 16 HOH HOH . SB 18 HOH Z 3 403 22 HOH HOH . SB 18 HOH Z 4 404 73 HOH HOH . SB 18 HOH Z 5 405 81 HOH HOH . SB 18 HOH Z 6 406 100 HOH HOH . SB 18 HOH Z 7 407 109 HOH HOH . SB 18 HOH Z 8 408 171 HOH HOH . SB 18 HOH Z 9 409 177 HOH HOH . TB 18 HOH a 1 301 4 HOH HOH . TB 18 HOH a 2 302 7 HOH HOH . TB 18 HOH a 3 303 34 HOH HOH . TB 18 HOH a 4 304 35 HOH HOH . TB 18 HOH a 5 305 51 HOH HOH . TB 18 HOH a 6 306 74 HOH HOH . TB 18 HOH a 7 307 87 HOH HOH . TB 18 HOH a 8 308 104 HOH HOH . TB 18 HOH a 9 309 119 HOH HOH . TB 18 HOH a 10 310 143 HOH HOH . TB 18 HOH a 11 311 167 HOH HOH . UB 18 HOH b 1 301 2 HOH HOH . UB 18 HOH b 2 302 80 HOH HOH . UB 18 HOH b 3 303 85 HOH HOH . UB 18 HOH b 4 304 98 HOH HOH . UB 18 HOH b 5 305 121 HOH HOH . UB 18 HOH b 6 306 158 HOH HOH . UB 18 HOH b 7 307 192 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id JA _atom_site.label_entity_id 15 _atom_site.Cartn_x 22.238 _atom_site.Cartn_y -116.74 _atom_site.Cartn_z 12.766 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 61.81 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 303 _atom_site.auth_asym_id K _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 222 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 362 _model_server_stats.query_time_ms 349 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #