data_4QY7 # _model_server_result.job_id s2c6gkpOlJJUmN6KI6sR_g _model_server_result.datetime_utc '2024-10-18 22:18:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qy7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":200}' # _entry.id 4QY7 # _exptl.entry_id 4QY7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 414.488 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NONAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4QY7 _cell.length_a 27.556 _cell.length_b 37.988 _cell.length_c 81.245 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QY7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LYS 5 A LYS 32 1_555 A N MSE 6 A MSE 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? covale ? covale2 A C MSE 6 A MSE 33 1_555 A N GLN 7 A GLN 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C LEU 42 A LEU 69 1_555 A N MSE 43 A MSE 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.377 ? covale ? covale4 A C MSE 43 A MSE 70 1_555 A N ASN 44 A ASN 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? # _chem_comp.formula 'C18 H38 O10' _chem_comp.formula_weight 414.488 _chem_comp.id 2PE _chem_comp.mon_nstd_flag . _chem_comp.name 'NONAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4QY7 _atom_sites.fract_transf_matrix[1][1] 0.03629 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026324 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012308 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2PE A 1 200 200 2PE 2PE . C 3 HOH A 1 301 201 HOH HOH . C 3 HOH A 2 302 202 HOH HOH . C 3 HOH A 3 303 203 HOH HOH . C 3 HOH A 4 304 204 HOH HOH . C 3 HOH A 5 305 205 HOH HOH . C 3 HOH A 6 306 206 HOH HOH . C 3 HOH A 7 307 207 HOH HOH . C 3 HOH A 8 308 208 HOH HOH . C 3 HOH A 9 309 209 HOH HOH . C 3 HOH A 10 310 210 HOH HOH . C 3 HOH A 11 311 211 HOH HOH . C 3 HOH A 12 312 212 HOH HOH . C 3 HOH A 13 313 213 HOH HOH . C 3 HOH A 14 314 214 HOH HOH . C 3 HOH A 15 315 215 HOH HOH . C 3 HOH A 16 316 216 HOH HOH . C 3 HOH A 17 317 217 HOH HOH . C 3 HOH A 18 318 218 HOH HOH . C 3 HOH A 19 319 219 HOH HOH . C 3 HOH A 20 320 220 HOH HOH . C 3 HOH A 21 321 221 HOH HOH . C 3 HOH A 22 322 222 HOH HOH . C 3 HOH A 23 323 223 HOH HOH . C 3 HOH A 24 324 224 HOH HOH . C 3 HOH A 25 325 225 HOH HOH . C 3 HOH A 26 326 226 HOH HOH . C 3 HOH A 27 327 227 HOH HOH . C 3 HOH A 28 328 228 HOH HOH . C 3 HOH A 29 329 229 HOH HOH . C 3 HOH A 30 330 230 HOH HOH . C 3 HOH A 31 331 231 HOH HOH . C 3 HOH A 32 332 232 HOH HOH . C 3 HOH A 33 333 233 HOH HOH . C 3 HOH A 34 334 234 HOH HOH . C 3 HOH A 35 335 235 HOH HOH . C 3 HOH A 36 336 236 HOH HOH . C 3 HOH A 37 337 237 HOH HOH . C 3 HOH A 38 338 238 HOH HOH . C 3 HOH A 39 339 239 HOH HOH . C 3 HOH A 40 340 240 HOH HOH . C 3 HOH A 41 341 241 HOH HOH . C 3 HOH A 42 342 242 HOH HOH . C 3 HOH A 43 343 243 HOH HOH . C 3 HOH A 44 344 244 HOH HOH . C 3 HOH A 45 345 245 HOH HOH . C 3 HOH A 46 346 246 HOH HOH . C 3 HOH A 47 347 247 HOH HOH . C 3 HOH A 48 348 248 HOH HOH . C 3 HOH A 49 349 249 HOH HOH . C 3 HOH A 50 350 250 HOH HOH . C 3 HOH A 51 351 251 HOH HOH . C 3 HOH A 52 352 252 HOH HOH . C 3 HOH A 53 353 253 HOH HOH . C 3 HOH A 54 354 254 HOH HOH . C 3 HOH A 55 355 255 HOH HOH . C 3 HOH A 56 356 256 HOH HOH . C 3 HOH A 57 357 257 HOH HOH . C 3 HOH A 58 358 258 HOH HOH . C 3 HOH A 59 359 259 HOH HOH . C 3 HOH A 60 360 260 HOH HOH . C 3 HOH A 61 361 261 HOH HOH . C 3 HOH A 62 362 262 HOH HOH . C 3 HOH A 63 363 263 HOH HOH . C 3 HOH A 64 364 264 HOH HOH . C 3 HOH A 65 365 265 HOH HOH . C 3 HOH A 66 366 266 HOH HOH . C 3 HOH A 67 367 267 HOH HOH . C 3 HOH A 68 368 268 HOH HOH . C 3 HOH A 69 369 269 HOH HOH . C 3 HOH A 70 370 270 HOH HOH . C 3 HOH A 71 371 271 HOH HOH . C 3 HOH A 72 372 272 HOH HOH . C 3 HOH A 73 373 273 HOH HOH . C 3 HOH A 74 374 274 HOH HOH . C 3 HOH A 75 375 275 HOH HOH . C 3 HOH A 76 376 276 HOH HOH . C 3 HOH A 77 377 277 HOH HOH . C 3 HOH A 78 378 278 HOH HOH . C 3 HOH A 79 379 279 HOH HOH . C 3 HOH A 80 380 280 HOH HOH . C 3 HOH A 81 381 281 HOH HOH . C 3 HOH A 82 382 282 HOH HOH . C 3 HOH A 83 383 283 HOH HOH . C 3 HOH A 84 384 284 HOH HOH . C 3 HOH A 85 385 285 HOH HOH . C 3 HOH A 86 386 286 HOH HOH . C 3 HOH A 87 387 287 HOH HOH . C 3 HOH A 88 388 288 HOH HOH . C 3 HOH A 89 389 289 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 2PE . . . B 2 12.69 -10.621 10.376 1 68.15 ? O1 2PE 200 A 1 HETATM 2 C C2 2PE . . . B 2 13.48 -9.805 11.252 1 68.42 ? C2 2PE 200 A 1 HETATM 3 C C3 2PE . . . B 2 14.843 -9.525 10.625 1 68.78 ? C3 2PE 200 A 1 HETATM 4 O O4 2PE . . . B 2 15.06 -8.11 10.566 1 68.51 ? O4 2PE 200 A 1 HETATM 5 C C5 2PE . . . B 2 15.102 -7.542 9.255 1 67.37 ? C5 2PE 200 A 1 HETATM 6 C C6 2PE . . . B 2 16.546 -7.472 8.772 1 66.66 ? C6 2PE 200 A 1 HETATM 7 O O7 2PE . . . B 2 16.59 -6.851 7.49 1 66.26 ? O7 2PE 200 A 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #