data_4QZ8
#
_model_server_result.job_id            9cvudE5eStKEXD4Rm3Aqig 
_model_server_result.datetime_utc      '2024-11-24 02:43:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4qz8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":602}' 
#
_entry.id    4QZ8 
#
_exptl.entry_id    4QZ8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          97.98 
_cell.angle_gamma         90 
_cell.entry_id            4QZ8 
_cell.length_a            59.329 
_cell.length_b            74.259 
_cell.length_c            118.969 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4QZ8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O THR 143 A THR 253 1_555 F NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? 
metalc ? metalc2 A O VAL 145 A VAL 255 1_555 F NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? 
metalc ? metalc3 A O VAL 148 A VAL 258 1_555 F NA NA . A NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.474 ? 
metalc ? metalc4 A OD1 ASP 233 A ASP 343 1_555 E MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? 
metalc ? metalc5 A OD2 ASP 235 A ASP 345 1_555 E MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.693 ? 
metalc ? metalc6 E MG MG . A MG 601 1_555 G O2A DCT . A DCT 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? 
metalc ? metalc7 E MG MG . A MG 601 1_555 G O2B DCT . A DCT 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? 
metalc ? metalc8 E MG MG . A MG 601 1_555 G O2G DCT . A DCT 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.595 ? 
metalc ? metalc9 E MG MG . A MG 601 1_555 H O HOH . A HOH 733 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc10 F NA NA . A NA 602 1_555 D OP1 DA 5 U DA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? 
hydrog WATSON-CRICK hydrog1 B N1 DA 1 D DA 1 1_555 C N3 DT 5 T DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 B N6 DA 1 D DA 1 1_555 C O4 DT 5 T DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 B N1 DA 2 D DA 2 1_555 C N3 DT 4 T DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 B N6 DA 2 D DA 2 1_555 C O4 DT 4 T DT 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 B N1 DA 3 D DA 3 1_555 C N3 DT 3 T DT 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 B N6 DA 3 D DA 3 1_555 C O4 DT 3 T DT 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 B N1 DA 4 D DA 4 1_555 C N3 DT 2 T DT 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 B N6 DA 4 D DA 4 1_555 C O4 DT 2 T DT 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 B N1 DA 5 D DA 5 1_555 C N3 DT 1 T DT 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 B N6 DA 5 D DA 5 1_555 C O4 DT 1 T DT 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4QZ8 
_atom_sites.fract_transf_matrix[1][1]    0.016855 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002363 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013466 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008488 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 4 MG A 1 601 1 MG MG . 
F 5 NA A 1 602 2 NA NA . 
G 6 DCT A 1 603 1 DCT DCT . 
H 7 HOH A 1 701 1 HOH HOH . 
H 7 HOH A 2 702 2 HOH HOH . 
H 7 HOH A 3 703 4 HOH HOH . 
H 7 HOH A 4 704 5 HOH HOH . 
H 7 HOH A 5 705 6 HOH HOH . 
H 7 HOH A 6 706 7 HOH HOH . 
H 7 HOH A 7 707 8 HOH HOH . 
H 7 HOH A 8 708 9 HOH HOH . 
H 7 HOH A 9 709 10 HOH HOH . 
H 7 HOH A 10 710 11 HOH HOH . 
H 7 HOH A 11 711 13 HOH HOH . 
H 7 HOH A 12 712 14 HOH HOH . 
H 7 HOH A 13 713 15 HOH HOH . 
H 7 HOH A 14 714 17 HOH HOH . 
H 7 HOH A 15 715 18 HOH HOH . 
H 7 HOH A 16 716 19 HOH HOH . 
H 7 HOH A 17 717 20 HOH HOH . 
H 7 HOH A 18 718 21 HOH HOH . 
H 7 HOH A 19 719 23 HOH HOH . 
H 7 HOH A 20 720 24 HOH HOH . 
H 7 HOH A 21 721 25 HOH HOH . 
H 7 HOH A 22 722 26 HOH HOH . 
H 7 HOH A 23 723 27 HOH HOH . 
H 7 HOH A 24 724 28 HOH HOH . 
H 7 HOH A 25 725 30 HOH HOH . 
H 7 HOH A 26 726 31 HOH HOH . 
H 7 HOH A 27 727 34 HOH HOH . 
H 7 HOH A 28 728 35 HOH HOH . 
H 7 HOH A 29 729 37 HOH HOH . 
H 7 HOH A 30 730 39 HOH HOH . 
H 7 HOH A 31 731 40 HOH HOH . 
H 7 HOH A 32 732 41 HOH HOH . 
H 7 HOH A 33 733 43 HOH HOH . 
H 7 HOH A 34 734 44 HOH HOH . 
H 7 HOH A 35 735 46 HOH HOH . 
H 7 HOH A 36 736 47 HOH HOH . 
H 7 HOH A 37 737 49 HOH HOH . 
H 7 HOH A 38 738 50 HOH HOH . 
H 7 HOH A 39 739 54 HOH HOH . 
H 7 HOH A 40 740 57 HOH HOH . 
H 7 HOH A 41 741 58 HOH HOH . 
H 7 HOH A 42 742 59 HOH HOH . 
H 7 HOH A 43 743 60 HOH HOH . 
H 7 HOH A 44 744 62 HOH HOH . 
H 7 HOH A 45 745 63 HOH HOH . 
H 7 HOH A 46 746 64 HOH HOH . 
H 7 HOH A 47 747 65 HOH HOH . 
H 7 HOH A 48 748 66 HOH HOH . 
H 7 HOH A 49 749 67 HOH HOH . 
H 7 HOH A 50 750 68 HOH HOH . 
H 7 HOH A 51 751 69 HOH HOH . 
H 7 HOH A 52 752 70 HOH HOH . 
H 7 HOH A 53 753 71 HOH HOH . 
H 7 HOH A 54 754 72 HOH HOH . 
H 7 HOH A 55 755 73 HOH HOH . 
H 7 HOH A 56 756 74 HOH HOH . 
H 7 HOH A 57 757 75 HOH HOH . 
H 7 HOH A 58 758 76 HOH HOH . 
H 7 HOH A 59 759 78 HOH HOH . 
H 7 HOH A 60 760 80 HOH HOH . 
H 7 HOH A 61 761 81 HOH HOH . 
H 7 HOH A 62 762 83 HOH HOH . 
H 7 HOH A 63 763 86 HOH HOH . 
H 7 HOH A 64 764 87 HOH HOH . 
H 7 HOH A 65 765 89 HOH HOH . 
I 7 HOH D 1 101 3 HOH HOH . 
I 7 HOH D 2 102 12 HOH HOH . 
I 7 HOH D 3 103 16 HOH HOH . 
I 7 HOH D 4 104 22 HOH HOH . 
I 7 HOH D 5 105 29 HOH HOH . 
I 7 HOH D 6 106 32 HOH HOH . 
I 7 HOH D 7 107 38 HOH HOH . 
I 7 HOH D 8 108 42 HOH HOH . 
I 7 HOH D 9 109 55 HOH HOH . 
I 7 HOH D 10 110 79 HOH HOH . 
J 7 HOH T 1 101 36 HOH HOH . 
J 7 HOH T 2 102 48 HOH HOH . 
J 7 HOH T 3 103 51 HOH HOH . 
J 7 HOH T 4 104 52 HOH HOH . 
J 7 HOH T 5 105 53 HOH HOH . 
J 7 HOH T 6 106 56 HOH HOH . 
J 7 HOH T 7 107 61 HOH HOH . 
J 7 HOH T 8 108 88 HOH HOH . 
K 7 HOH U 1 101 33 HOH HOH . 
K 7 HOH U 2 102 45 HOH HOH . 
K 7 HOH U 3 103 77 HOH HOH . 
K 7 HOH U 4 104 82 HOH HOH . 
K 7 HOH U 5 105 84 HOH HOH . 
K 7 HOH U 6 106 85 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               -5.217 
_atom_site.Cartn_y               -6.34 
_atom_site.Cartn_z               40.036 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        92.3 
_atom_site.pdbx_formal_charge    1 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           602 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           353 
_model_server_stats.encode_time_ms          12 
_model_server_stats.element_count           1 
#