data_4R06 # _model_server_result.job_id 3uDfXWlFzGinirIWYTdO8g _model_server_result.datetime_utc '2024-11-05 01:27:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4r06 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 4R06 # _exptl.entry_id 4R06 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 468.567 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(naphthalen-1-ylsulfonyl)-N-[(1S)-1-phenylpropyl]-1H-indole-5-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.93 _cell.angle_gamma 90 _cell.entry_id 4R06 _cell.length_a 92.79 _cell.length_b 62.6 _cell.length_c 118.57 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4R06 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C28 H24 N2 O3 S' _chem_comp.formula_weight 468.567 _chem_comp.id 3E7 _chem_comp.mon_nstd_flag . _chem_comp.name 1-(naphthalen-1-ylsulfonyl)-N-[(1S)-1-phenylpropyl]-1H-indole-5-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O23 S22 3E7 doub 1 n n C31 C32 3E7 doub 2 n y C31 C29 3E7 sing 3 n y C28 C29 3E7 doub 4 n y C28 C27 3E7 sing 5 n y C32 C33 3E7 sing 6 n y C29 C30 3E7 sing 7 n y C27 C26 3E7 doub 8 n y C33 C34 3E7 doub 9 n y O24 S22 3E7 doub 10 n n C30 C34 3E7 sing 11 n y C30 C25 3E7 doub 12 n y C26 C25 3E7 sing 13 n y C25 S22 3E7 sing 14 n n S22 N19 3E7 sing 15 n n N19 C20 3E7 sing 16 n y N19 C16 3E7 sing 17 n y C20 C21 3E7 doub 18 n y C16 C15 3E7 doub 19 n y C16 C17 3E7 sing 20 n y C15 C14 3E7 sing 21 n y C21 C17 3E7 sing 22 n y C17 C18 3E7 doub 23 n y C14 C12 3E7 doub 24 n y C18 C12 3E7 sing 25 n y C12 C11 3E7 sing 26 n n C11 O13 3E7 doub 27 n n C11 N10 3E7 sing 28 n n N10 C07 3E7 sing 29 n n C04 C03 3E7 doub 30 n y C04 C05 3E7 sing 31 n y C03 C02 3E7 sing 32 n y C07 C05 3E7 sing 33 n n C07 C08 3E7 sing 34 n n C05 C06 3E7 doub 35 n y C02 C01 3E7 doub 36 n y C08 C09 3E7 sing 37 n n C06 C01 3E7 sing 38 n y C01 H1 3E7 sing 39 n n C02 H2 3E7 sing 40 n n C03 H3 3E7 sing 41 n n C04 H4 3E7 sing 42 n n C06 H5 3E7 sing 43 n n C07 H6 3E7 sing 44 n n C08 H7 3E7 sing 45 n n C08 H8 3E7 sing 46 n n C09 H9 3E7 sing 47 n n C09 H10 3E7 sing 48 n n C09 H11 3E7 sing 49 n n N10 H12 3E7 sing 50 n n C14 H13 3E7 sing 51 n n C15 H14 3E7 sing 52 n n C18 H15 3E7 sing 53 n n C20 H16 3E7 sing 54 n n C21 H17 3E7 sing 55 n n C26 H18 3E7 sing 56 n n C27 H19 3E7 sing 57 n n C28 H20 3E7 sing 58 n n C31 H21 3E7 sing 59 n n C32 H22 3E7 sing 60 n n C33 H23 3E7 sing 61 n n C34 H24 3E7 sing 62 n n # _atom_sites.entry_id 4R06 _atom_sites.fract_transf_matrix[1][1] 0.010777 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002277 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015974 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00862 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 3E7 A 1 501 1 3E7 LIG . D 3 SO4 A 1 502 1 SO4 SO4 . E 4 HOH A 1 601 23 HOH HOH . E 4 HOH A 2 602 24 HOH HOH . E 4 HOH A 3 603 25 HOH HOH . E 4 HOH A 4 604 27 HOH HOH . E 4 HOH A 5 605 28 HOH HOH . E 4 HOH A 6 606 30 HOH HOH . E 4 HOH A 7 607 31 HOH HOH . E 4 HOH A 8 608 32 HOH HOH . E 4 HOH A 9 609 33 HOH HOH . E 4 HOH A 10 610 34 HOH HOH . E 4 HOH A 11 611 35 HOH HOH . E 4 HOH A 12 612 38 HOH HOH . E 4 HOH A 13 613 40 HOH HOH . E 4 HOH A 14 614 42 HOH HOH . E 4 HOH A 15 615 45 HOH HOH . E 4 HOH A 16 616 46 HOH HOH . E 4 HOH A 17 617 47 HOH HOH . E 4 HOH A 18 618 48 HOH HOH . E 4 HOH A 19 619 51 HOH HOH . E 4 HOH A 20 620 52 HOH HOH . E 4 HOH A 21 621 53 HOH HOH . E 4 HOH A 22 622 54 HOH HOH . E 4 HOH A 23 623 55 HOH HOH . E 4 HOH A 24 624 60 HOH HOH . E 4 HOH A 25 625 64 HOH HOH . E 4 HOH A 26 626 65 HOH HOH . E 4 HOH A 27 627 66 HOH HOH . E 4 HOH A 28 628 67 HOH HOH . E 4 HOH A 29 629 68 HOH HOH . E 4 HOH A 30 630 69 HOH HOH . E 4 HOH A 31 631 70 HOH HOH . E 4 HOH A 32 632 71 HOH HOH . E 4 HOH A 33 633 72 HOH HOH . E 4 HOH A 34 634 73 HOH HOH . E 4 HOH A 35 635 75 HOH HOH . E 4 HOH A 36 636 76 HOH HOH . E 4 HOH A 37 637 78 HOH HOH . E 4 HOH A 38 638 79 HOH HOH . E 4 HOH A 39 639 80 HOH HOH . E 4 HOH A 40 640 81 HOH HOH . E 4 HOH A 41 641 82 HOH HOH . E 4 HOH A 42 642 84 HOH HOH . E 4 HOH A 43 643 85 HOH HOH . E 4 HOH A 44 644 87 HOH HOH . E 4 HOH A 45 645 88 HOH HOH . E 4 HOH A 46 646 90 HOH HOH . E 4 HOH A 47 647 91 HOH HOH . E 4 HOH A 48 648 104 HOH HOH . E 4 HOH A 49 649 105 HOH HOH . E 4 HOH A 50 650 106 HOH HOH . E 4 HOH A 51 651 108 HOH HOH . E 4 HOH A 52 652 109 HOH HOH . E 4 HOH A 53 653 110 HOH HOH . E 4 HOH A 54 654 111 HOH HOH . E 4 HOH A 55 655 112 HOH HOH . E 4 HOH A 56 656 113 HOH HOH . E 4 HOH A 57 657 124 HOH HOH . E 4 HOH A 58 658 125 HOH HOH . E 4 HOH A 59 659 126 HOH HOH . E 4 HOH A 60 660 127 HOH HOH . E 4 HOH A 61 661 128 HOH HOH . E 4 HOH A 62 662 129 HOH HOH . E 4 HOH A 63 663 130 HOH HOH . E 4 HOH A 64 664 131 HOH HOH . E 4 HOH A 65 665 132 HOH HOH . E 4 HOH A 66 666 133 HOH HOH . E 4 HOH A 67 667 134 HOH HOH . E 4 HOH A 68 668 135 HOH HOH . E 4 HOH A 69 669 136 HOH HOH . E 4 HOH A 70 670 137 HOH HOH . E 4 HOH A 71 671 138 HOH HOH . E 4 HOH A 72 672 139 HOH HOH . E 4 HOH A 73 673 140 HOH HOH . E 4 HOH A 74 674 141 HOH HOH . E 4 HOH A 75 675 142 HOH HOH . E 4 HOH A 76 676 149 HOH HOH . E 4 HOH A 77 677 150 HOH HOH . E 4 HOH A 78 678 153 HOH HOH . E 4 HOH A 79 679 154 HOH HOH . E 4 HOH A 80 680 156 HOH HOH . E 4 HOH A 81 681 157 HOH HOH . E 4 HOH A 82 682 158 HOH HOH . E 4 HOH A 83 683 160 HOH HOH . E 4 HOH A 84 684 161 HOH HOH . E 4 HOH A 85 685 162 HOH HOH . E 4 HOH A 86 686 163 HOH HOH . E 4 HOH A 87 687 164 HOH HOH . E 4 HOH A 88 688 165 HOH HOH . E 4 HOH A 89 689 166 HOH HOH . E 4 HOH A 90 690 167 HOH HOH . E 4 HOH A 91 691 174 HOH HOH . E 4 HOH A 92 692 183 HOH HOH . E 4 HOH A 93 693 184 HOH HOH . E 4 HOH A 94 694 188 HOH HOH . E 4 HOH A 95 695 189 HOH HOH . F 4 HOH B 1 501 1 HOH HOH . F 4 HOH B 2 502 2 HOH HOH . F 4 HOH B 3 503 3 HOH HOH . F 4 HOH B 4 504 4 HOH HOH . F 4 HOH B 5 505 5 HOH HOH . F 4 HOH B 6 506 6 HOH HOH . F 4 HOH B 7 507 7 HOH HOH . F 4 HOH B 8 508 8 HOH HOH . F 4 HOH B 9 509 9 HOH HOH . F 4 HOH B 10 510 10 HOH HOH . F 4 HOH B 11 511 11 HOH HOH . F 4 HOH B 12 512 12 HOH HOH . F 4 HOH B 13 513 13 HOH HOH . F 4 HOH B 14 514 14 HOH HOH . F 4 HOH B 15 515 15 HOH HOH . F 4 HOH B 16 516 16 HOH HOH . F 4 HOH B 17 517 17 HOH HOH . F 4 HOH B 18 518 18 HOH HOH . F 4 HOH B 19 519 19 HOH HOH . F 4 HOH B 20 520 20 HOH HOH . F 4 HOH B 21 521 21 HOH HOH . F 4 HOH B 22 522 22 HOH HOH . F 4 HOH B 23 523 26 HOH HOH . F 4 HOH B 24 524 29 HOH HOH . F 4 HOH B 25 525 36 HOH HOH . F 4 HOH B 26 526 37 HOH HOH . F 4 HOH B 27 527 39 HOH HOH . F 4 HOH B 28 528 41 HOH HOH . F 4 HOH B 29 529 43 HOH HOH . F 4 HOH B 30 530 44 HOH HOH . F 4 HOH B 31 531 49 HOH HOH . F 4 HOH B 32 532 50 HOH HOH . F 4 HOH B 33 533 56 HOH HOH . F 4 HOH B 34 534 57 HOH HOH . F 4 HOH B 35 535 58 HOH HOH . F 4 HOH B 36 536 59 HOH HOH . F 4 HOH B 37 537 61 HOH HOH . F 4 HOH B 38 538 62 HOH HOH . F 4 HOH B 39 539 63 HOH HOH . F 4 HOH B 40 540 89 HOH HOH . F 4 HOH B 41 541 92 HOH HOH . F 4 HOH B 42 542 94 HOH HOH . F 4 HOH B 43 543 95 HOH HOH . F 4 HOH B 44 544 96 HOH HOH . F 4 HOH B 45 545 97 HOH HOH . F 4 HOH B 46 546 98 HOH HOH . F 4 HOH B 47 547 99 HOH HOH . F 4 HOH B 48 548 100 HOH HOH . F 4 HOH B 49 549 101 HOH HOH . F 4 HOH B 50 550 102 HOH HOH . F 4 HOH B 51 551 103 HOH HOH . F 4 HOH B 52 552 114 HOH HOH . F 4 HOH B 53 553 115 HOH HOH . F 4 HOH B 54 554 116 HOH HOH . F 4 HOH B 55 555 117 HOH HOH . F 4 HOH B 56 556 118 HOH HOH . F 4 HOH B 57 557 119 HOH HOH . F 4 HOH B 58 558 120 HOH HOH . F 4 HOH B 59 559 121 HOH HOH . F 4 HOH B 60 560 122 HOH HOH . F 4 HOH B 61 561 143 HOH HOH . F 4 HOH B 62 562 144 HOH HOH . F 4 HOH B 63 563 146 HOH HOH . F 4 HOH B 64 564 148 HOH HOH . F 4 HOH B 65 565 151 HOH HOH . F 4 HOH B 66 566 152 HOH HOH . F 4 HOH B 67 567 155 HOH HOH . F 4 HOH B 68 568 159 HOH HOH . F 4 HOH B 69 569 168 HOH HOH . F 4 HOH B 70 570 170 HOH HOH . F 4 HOH B 71 571 171 HOH HOH . F 4 HOH B 72 572 172 HOH HOH . F 4 HOH B 73 573 173 HOH HOH . F 4 HOH B 74 574 175 HOH HOH . F 4 HOH B 75 575 176 HOH HOH . F 4 HOH B 76 576 178 HOH HOH . F 4 HOH B 77 577 179 HOH HOH . F 4 HOH B 78 578 180 HOH HOH . F 4 HOH B 79 579 181 HOH HOH . F 4 HOH B 80 580 182 HOH HOH . F 4 HOH B 81 581 185 HOH HOH . F 4 HOH B 82 582 186 HOH HOH . F 4 HOH B 83 583 187 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 3E7 . . . C 2 21.141 32.08 20.47 1 83.56 ? C01 3E7 501 A 1 HETATM 2 C C02 3E7 . . . C 2 21.423 32.819 19.325 1 86.6 ? C02 3E7 501 A 1 HETATM 3 C C03 3E7 . . . C 2 20.787 32.537 18.128 1 80.55 ? C03 3E7 501 A 1 HETATM 4 C C04 3E7 . . . C 2 19.869 31.512 18.085 1 77.93 ? C04 3E7 501 A 1 HETATM 5 C C05 3E7 . . . C 2 19.592 30.77 19.217 1 75.12 ? C05 3E7 501 A 1 HETATM 6 C C06 3E7 . . . C 2 20.223 31.063 20.424 1 79.68 ? C06 3E7 501 A 1 HETATM 7 C C07 3E7 . . . C 2 18.549 29.675 19.12 1 67.81 ? C07 3E7 501 A 1 HETATM 8 C C08 3E7 . . . C 2 18.527 28.573 20.109 1 65.78 ? C08 3E7 501 A 1 HETATM 9 C C09 3E7 . . . C 2 17.193 28.275 20.603 1 57.69 ? C09 3E7 501 A 1 HETATM 10 N N10 3E7 . . . C 2 18.437 29.239 17.691 1 66.08 ? N10 3E7 501 A 1 HETATM 11 C C11 3E7 . . . C 2 19.221 28.24 16.949 1 66.69 ? C11 3E7 501 A 1 HETATM 12 C C12 3E7 . . . C 2 18.727 28.161 15.509 1 68.24 ? C12 3E7 501 A 1 HETATM 13 O O13 3E7 . . . C 2 20.17 27.608 17.437 1 58.43 ? O13 3E7 501 A 1 HETATM 14 C C14 3E7 . . . C 2 19.556 28.172 14.376 1 74.05 ? C14 3E7 501 A 1 HETATM 15 C C15 3E7 . . . C 2 18.959 28.157 13.049 1 74.61 ? C15 3E7 501 A 1 HETATM 16 C C16 3E7 . . . C 2 17.579 28.145 12.899 1 78.57 ? C16 3E7 501 A 1 HETATM 17 C C17 3E7 . . . C 2 16.754 28.144 14.047 1 77.64 ? C17 3E7 501 A 1 HETATM 18 C C18 3E7 . . . C 2 17.335 28.164 15.339 1 71.09 ? C18 3E7 501 A 1 HETATM 19 N N19 3E7 . . . C 2 16.758 28.108 11.775 1 84.85 ? N19 3E7 501 A 1 HETATM 20 C C20 3E7 . . . C 2 15.461 28.107 12.158 1 76.4 ? C20 3E7 501 A 1 HETATM 21 C C21 3E7 . . . C 2 15.4 28.122 13.583 1 77.99 ? C21 3E7 501 A 1 HETATM 22 S S22 3E7 . . . C 2 17.238 28.13 10.195 1 65.23 ? S22 3E7 501 A 1 HETATM 23 O O23 3E7 . . . C 2 16.041 27.922 9.413 1 66.89 ? O23 3E7 501 A 1 HETATM 24 O O24 3E7 . . . C 2 18.276 27.118 9.881 1 65.33 ? O24 3E7 501 A 1 HETATM 25 C C25 3E7 . . . C 2 17.947 29.806 9.991 1 58.72 ? C25 3E7 501 A 1 HETATM 26 C C26 3E7 . . . C 2 19.377 29.866 9.942 1 55.34 ? C26 3E7 501 A 1 HETATM 27 C C27 3E7 . . . C 2 20.039 31.128 9.777 1 60.62 ? C27 3E7 501 A 1 HETATM 28 C C28 3E7 . . . C 2 19.28 32.297 9.683 1 66.11 ? C28 3E7 501 A 1 HETATM 29 C C29 3E7 . . . C 2 17.807 32.251 9.742 1 68.15 ? C29 3E7 501 A 1 HETATM 30 C C30 3E7 . . . C 2 17.151 31.023 9.895 1 65.3 ? C30 3E7 501 A 1 HETATM 31 C C31 3E7 . . . C 2 17.084 33.463 9.638 1 67.55 ? C31 3E7 501 A 1 HETATM 32 C C32 3E7 . . . C 2 15.722 33.456 9.69 1 64.07 ? C32 3E7 501 A 1 HETATM 33 C C33 3E7 . . . C 2 15.026 32.199 9.852 1 64.33 ? C33 3E7 501 A 1 HETATM 34 C C34 3E7 . . . C 2 15.715 31.033 9.951 1 63.77 ? C34 3E7 501 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 34 #