data_4R0C # _model_server_result.job_id BOoF6leuv8rdpw-Uzb9E1Q _model_server_result.datetime_utc '2024-11-04 22:34:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4r0c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":801}' # _entry.id 4R0C # _exptl.entry_id 4R0C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.82 _cell.angle_gamma 90 _cell.entry_id 4R0C _cell.length_a 94.145 _cell.length_b 200.984 _cell.length_c 101.493 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4R0C _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 K N N ? 2 L N N ? 2 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 390 A ASN 390 1_555 E NA NA . A NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc2 A O GLY 394 A GLY 394 1_555 E NA NA . A NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc3 A O ASP 429 A ASP 429 1_555 E NA NA . A NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.578 ? metalc ? metalc4 A OD1 ASP 429 A ASP 429 1_555 E NA NA . A NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? metalc ? metalc5 A OD1 ASN 433 A ASN 433 1_555 E NA NA . A NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc6 E NA NA . A NA 801 1_555 S O HOH . A HOH 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? metalc ? metalc7 B OD1 ASN 390 B ASN 390 1_555 K NA NA . B NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.74 ? metalc ? metalc8 B O GLY 394 B GLY 394 1_555 K NA NA . B NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc9 B OD1 ASP 429 B ASP 429 1_555 K NA NA . B NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? metalc ? metalc10 B O ASP 429 B ASP 429 1_555 K NA NA . B NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? metalc ? metalc11 B OD1 ASN 433 B ASN 433 1_555 K NA NA . B NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc12 K NA NA . B NA 801 1_555 T O HOH . B HOH 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? metalc ? metalc13 C OD1 ASN 390 C ASN 390 1_555 L NA NA . C NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.794 ? metalc ? metalc14 C O GLY 394 C GLY 394 1_555 L NA NA . C NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc15 C OD1 ASP 429 C ASP 429 1_555 L NA NA . C NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc16 C O ASP 429 C ASP 429 1_555 L NA NA . C NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? metalc ? metalc17 C OD1 ASN 433 C ASN 433 1_555 L NA NA . C NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc18 L NA NA . C NA 801 1_555 U O HOH . C HOH 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? metalc ? metalc19 D OD1 ASN 390 D ASN 390 1_555 Q NA NA . D NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc20 D O GLY 394 D GLY 394 1_555 Q NA NA . D NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc21 D OD1 ASP 429 D ASP 429 1_555 Q NA NA . D NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc22 D O ASP 429 D ASP 429 1_555 Q NA NA . D NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc23 D OD1 ASN 433 D ASN 433 1_555 Q NA NA . D NA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.469 ? metalc ? metalc24 Q NA NA . D NA 801 1_555 V O HOH . D HOH 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4R0C _atom_sites.fract_transf_matrix[1][1] 0.010622 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000338 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004976 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009858 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NA A 1 801 801 NA NA . F 3 LMT A 1 802 1002 LMT LMT . G 4 BOG A 1 803 1003 BOG BOG . H 3 LMT A 1 804 1004 LMT LMT . I 3 LMT A 1 805 1005 LMT LMT . J 3 LMT A 1 806 1007 LMT LMT . K 2 NA B 1 801 801 NA NA . L 2 NA C 1 801 801 NA NA . M 4 BOG C 1 802 1001 BOG BOG . N 3 LMT C 1 803 1002 LMT LMT . O 4 BOG C 1 804 1003 BOG BOG . P 3 LMT C 1 805 1004 LMT LMT . Q 2 NA D 1 801 801 NA NA . R 4 BOG D 1 802 1002 BOG BOG . S 5 HOH A 1 901 1205 HOH HOH . S 5 HOH A 2 902 34 HOH HOH . S 5 HOH A 3 903 44 HOH HOH . S 5 HOH A 4 904 72 HOH HOH . S 5 HOH A 5 905 116 HOH HOH . S 5 HOH A 6 906 126 HOH HOH . S 5 HOH A 7 907 132 HOH HOH . S 5 HOH A 8 908 135 HOH HOH . S 5 HOH A 9 909 136 HOH HOH . S 5 HOH A 10 910 162 HOH HOH . S 5 HOH A 11 911 170 HOH HOH . S 5 HOH A 12 912 199 HOH HOH . T 5 HOH B 1 901 1206 HOH HOH . T 5 HOH B 2 902 2 HOH HOH . T 5 HOH B 3 903 4 HOH HOH . T 5 HOH B 4 904 38 HOH HOH . T 5 HOH B 5 905 61 HOH HOH . T 5 HOH B 6 906 74 HOH HOH . T 5 HOH B 7 907 118 HOH HOH . T 5 HOH B 8 908 120 HOH HOH . T 5 HOH B 9 909 122 HOH HOH . T 5 HOH B 10 910 123 HOH HOH . T 5 HOH B 11 911 137 HOH HOH . T 5 HOH B 12 912 148 HOH HOH . T 5 HOH B 13 913 160 HOH HOH . T 5 HOH B 14 914 187 HOH HOH . T 5 HOH B 15 915 188 HOH HOH . U 5 HOH C 1 901 802 HOH HOH . U 5 HOH C 2 902 14 HOH HOH . U 5 HOH C 3 903 22 HOH HOH . U 5 HOH C 4 904 28 HOH HOH . U 5 HOH C 5 905 30 HOH HOH . U 5 HOH C 6 906 45 HOH HOH . U 5 HOH C 7 907 51 HOH HOH . U 5 HOH C 8 908 53 HOH HOH . U 5 HOH C 9 909 84 HOH HOH . U 5 HOH C 10 910 89 HOH HOH . U 5 HOH C 11 911 112 HOH HOH . U 5 HOH C 12 912 121 HOH HOH . U 5 HOH C 13 913 155 HOH HOH . U 5 HOH C 14 914 158 HOH HOH . U 5 HOH C 15 915 202 HOH HOH . V 5 HOH D 1 901 802 HOH HOH . V 5 HOH D 2 902 3 HOH HOH . V 5 HOH D 3 903 15 HOH HOH . V 5 HOH D 4 904 18 HOH HOH . V 5 HOH D 5 905 24 HOH HOH . V 5 HOH D 6 906 32 HOH HOH . V 5 HOH D 7 907 49 HOH HOH . V 5 HOH D 8 908 141 HOH HOH . V 5 HOH D 9 909 144 HOH HOH . V 5 HOH D 10 910 151 HOH HOH . V 5 HOH D 11 911 161 HOH HOH . V 5 HOH D 12 912 167 HOH HOH . V 5 HOH D 13 913 177 HOH HOH . V 5 HOH D 14 914 200 HOH HOH . V 5 HOH D 15 915 203 HOH HOH . V 5 HOH D 16 916 204 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 2 _atom_site.Cartn_x -30.255 _atom_site.Cartn_y 10.965 _atom_site.Cartn_z 242.905 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 64.2 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 801 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #