data_4R3C # _model_server_result.job_id MiKgx7IeUo2Msu2Ydvn5gg _model_server_result.datetime_utc '2024-12-28 13:55:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4r3c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 4R3C # _exptl.entry_id 4R3C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 381.473 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-(4-methylpiperazin-1-yl)-3-(naphthalen-2-yl)-4-(pyridin-4-yl)pyridazine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4R3C _cell.length_a 65.85 _cell.length_b 74.512 _cell.length_c 77.808 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4R3C _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 184 A ASP 161 1_555 A N CME 185 A CME 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale2 A C CME 185 A CME 162 1_555 A N GLU 186 A GLU 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C24 H23 N5' _chem_comp.formula_weight 381.473 _chem_comp.id 3GF _chem_comp.mon_nstd_flag . _chem_comp.name 6-(4-methylpiperazin-1-yl)-3-(naphthalen-2-yl)-4-(pyridin-4-yl)pyridazine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C3 3GF doub 1 n y C4 C5 3GF sing 2 n y C3 C2 3GF sing 3 n y C5 C6 3GF doub 4 n y C2 C1 3GF doub 5 n y C6 C1 3GF sing 6 n y C6 C7 3GF sing 7 n y C1 C10 3GF sing 8 n y C7 C8 3GF doub 9 n y C10 C9 3GF doub 10 n y C8 C9 3GF sing 11 n y C8 C11 3GF sing 12 n n N12 C11 3GF doub 13 n y N12 N13 3GF sing 14 n y C11 C16 3GF sing 15 n y C19 C20 3GF doub 16 n y C19 C17 3GF sing 17 n y N13 C14 3GF doub 18 n y C20 N21 3GF sing 19 n y C16 C17 3GF sing 20 n n C16 C15 3GF doub 21 n y C17 C23 3GF doub 22 n y C14 C15 3GF sing 23 n y C14 N18 3GF sing 24 n n N21 C22 3GF doub 25 n y C24 N18 3GF sing 26 n n C24 C25 3GF sing 27 n n N18 C28 3GF sing 28 n n C23 C22 3GF sing 29 n y C25 N26 3GF sing 30 n n C28 C27 3GF sing 31 n n N26 C27 3GF sing 32 n n N26 C29 3GF sing 33 n n C29 H1 3GF sing 34 n n C29 H2 3GF sing 35 n n C29 H3 3GF sing 36 n n C27 H5 3GF sing 37 n n C27 H6 3GF sing 38 n n C28 H7 3GF sing 39 n n C28 H8 3GF sing 40 n n C24 H9 3GF sing 41 n n C24 H10 3GF sing 42 n n C25 H11 3GF sing 43 n n C25 H12 3GF sing 44 n n C15 H13 3GF sing 45 n n C19 H14 3GF sing 46 n n C20 H15 3GF sing 47 n n C22 H16 3GF sing 48 n n C23 H17 3GF sing 49 n n C7 H18 3GF sing 50 n n C5 H19 3GF sing 51 n n C4 H20 3GF sing 52 n n C3 H21 3GF sing 53 n n C2 H22 3GF sing 54 n n C10 H23 3GF sing 55 n n C9 H24 3GF sing 56 n n # _atom_sites.entry_id 4R3C _atom_sites.fract_transf_matrix[1][1] 0.015186 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013421 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012852 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GG5 A 1 401 401 GG5 GG5 . C 3 3GF A 1 402 402 3GF BYF . D 3 3GF A 1 403 403 3GF BYF . E 4 CL A 1 404 404 CL CL . F 5 HOH A 1 501 405 HOH HOH . F 5 HOH A 2 502 406 HOH HOH . F 5 HOH A 3 503 407 HOH HOH . F 5 HOH A 4 504 408 HOH HOH . F 5 HOH A 5 505 409 HOH HOH . F 5 HOH A 6 506 410 HOH HOH . F 5 HOH A 7 507 411 HOH HOH . F 5 HOH A 8 508 412 HOH HOH . F 5 HOH A 9 509 413 HOH HOH . F 5 HOH A 10 510 414 HOH HOH . F 5 HOH A 11 511 415 HOH HOH . F 5 HOH A 12 512 416 HOH HOH . F 5 HOH A 13 513 417 HOH HOH . F 5 HOH A 14 514 418 HOH HOH . F 5 HOH A 15 515 419 HOH HOH . F 5 HOH A 16 516 420 HOH HOH . F 5 HOH A 17 517 421 HOH HOH . F 5 HOH A 18 518 422 HOH HOH . F 5 HOH A 19 519 423 HOH HOH . F 5 HOH A 20 520 424 HOH HOH . F 5 HOH A 21 521 425 HOH HOH . F 5 HOH A 22 522 426 HOH HOH . F 5 HOH A 23 523 427 HOH HOH . F 5 HOH A 24 524 428 HOH HOH . F 5 HOH A 25 525 429 HOH HOH . F 5 HOH A 26 526 430 HOH HOH . F 5 HOH A 27 527 431 HOH HOH . F 5 HOH A 28 528 432 HOH HOH . F 5 HOH A 29 529 433 HOH HOH . F 5 HOH A 30 530 434 HOH HOH . F 5 HOH A 31 531 435 HOH HOH . F 5 HOH A 32 532 436 HOH HOH . F 5 HOH A 33 533 437 HOH HOH . F 5 HOH A 34 534 438 HOH HOH . F 5 HOH A 35 535 439 HOH HOH . F 5 HOH A 36 536 440 HOH HOH . F 5 HOH A 37 537 441 HOH HOH . F 5 HOH A 38 538 442 HOH HOH . F 5 HOH A 39 539 443 HOH HOH . F 5 HOH A 40 540 444 HOH HOH . F 5 HOH A 41 541 445 HOH HOH . F 5 HOH A 42 542 446 HOH HOH . F 5 HOH A 43 543 447 HOH HOH . F 5 HOH A 44 544 448 HOH HOH . F 5 HOH A 45 545 449 HOH HOH . F 5 HOH A 46 546 450 HOH HOH . F 5 HOH A 47 547 452 HOH HOH . F 5 HOH A 48 548 453 HOH HOH . F 5 HOH A 49 549 454 HOH HOH . F 5 HOH A 50 550 455 HOH HOH . F 5 HOH A 51 551 456 HOH HOH . F 5 HOH A 52 552 457 HOH HOH . F 5 HOH A 53 553 458 HOH HOH . F 5 HOH A 54 554 459 HOH HOH . F 5 HOH A 55 555 460 HOH HOH . F 5 HOH A 56 556 461 HOH HOH . F 5 HOH A 57 557 462 HOH HOH . F 5 HOH A 58 558 463 HOH HOH . F 5 HOH A 59 559 464 HOH HOH . F 5 HOH A 60 560 465 HOH HOH . F 5 HOH A 61 561 466 HOH HOH . F 5 HOH A 62 562 467 HOH HOH . F 5 HOH A 63 563 468 HOH HOH . F 5 HOH A 64 564 469 HOH HOH . F 5 HOH A 65 565 470 HOH HOH . F 5 HOH A 66 566 471 HOH HOH . F 5 HOH A 67 567 473 HOH HOH . F 5 HOH A 68 568 474 HOH HOH . F 5 HOH A 69 569 475 HOH HOH . F 5 HOH A 70 570 476 HOH HOH . F 5 HOH A 71 571 477 HOH HOH . F 5 HOH A 72 572 479 HOH HOH . F 5 HOH A 73 573 480 HOH HOH . F 5 HOH A 74 574 481 HOH HOH . F 5 HOH A 75 575 482 HOH HOH . F 5 HOH A 76 576 483 HOH HOH . F 5 HOH A 77 577 484 HOH HOH . F 5 HOH A 78 578 485 HOH HOH . F 5 HOH A 79 579 486 HOH HOH . F 5 HOH A 80 580 487 HOH HOH . F 5 HOH A 81 581 488 HOH HOH . F 5 HOH A 82 582 489 HOH HOH . F 5 HOH A 83 583 490 HOH HOH . F 5 HOH A 84 584 491 HOH HOH . F 5 HOH A 85 585 492 HOH HOH . F 5 HOH A 86 586 493 HOH HOH . F 5 HOH A 87 587 494 HOH HOH . F 5 HOH A 88 588 495 HOH HOH . F 5 HOH A 89 589 496 HOH HOH . F 5 HOH A 90 590 497 HOH HOH . F 5 HOH A 91 591 498 HOH HOH . F 5 HOH A 92 592 499 HOH HOH . F 5 HOH A 93 593 500 HOH HOH . F 5 HOH A 94 594 501 HOH HOH . F 5 HOH A 95 595 502 HOH HOH . F 5 HOH A 96 596 503 HOH HOH . F 5 HOH A 97 597 504 HOH HOH . F 5 HOH A 98 598 505 HOH HOH . F 5 HOH A 99 599 506 HOH HOH . F 5 HOH A 100 600 507 HOH HOH . F 5 HOH A 101 601 508 HOH HOH . F 5 HOH A 102 602 509 HOH HOH . F 5 HOH A 103 603 510 HOH HOH . F 5 HOH A 104 604 511 HOH HOH . F 5 HOH A 105 605 512 HOH HOH . F 5 HOH A 106 606 513 HOH HOH . F 5 HOH A 107 607 514 HOH HOH . F 5 HOH A 108 608 515 HOH HOH . F 5 HOH A 109 609 516 HOH HOH . F 5 HOH A 110 610 517 HOH HOH . F 5 HOH A 111 611 518 HOH HOH . F 5 HOH A 112 612 519 HOH HOH . F 5 HOH A 113 613 520 HOH HOH . F 5 HOH A 114 614 521 HOH HOH . F 5 HOH A 115 615 522 HOH HOH . F 5 HOH A 116 616 523 HOH HOH . F 5 HOH A 117 617 524 HOH HOH . F 5 HOH A 118 618 525 HOH HOH . F 5 HOH A 119 619 526 HOH HOH . F 5 HOH A 120 620 527 HOH HOH . F 5 HOH A 121 621 528 HOH HOH . F 5 HOH A 122 622 529 HOH HOH . F 5 HOH A 123 623 531 HOH HOH . F 5 HOH A 124 624 532 HOH HOH . F 5 HOH A 125 625 533 HOH HOH . F 5 HOH A 126 626 534 HOH HOH . F 5 HOH A 127 627 535 HOH HOH . F 5 HOH A 128 628 536 HOH HOH . F 5 HOH A 129 629 537 HOH HOH . F 5 HOH A 130 630 538 HOH HOH . F 5 HOH A 131 631 539 HOH HOH . F 5 HOH A 132 632 540 HOH HOH . F 5 HOH A 133 633 541 HOH HOH . F 5 HOH A 134 634 542 HOH HOH . F 5 HOH A 135 635 543 HOH HOH . F 5 HOH A 136 636 545 HOH HOH . F 5 HOH A 137 637 546 HOH HOH . F 5 HOH A 138 638 547 HOH HOH . F 5 HOH A 139 639 548 HOH HOH . F 5 HOH A 140 640 549 HOH HOH . F 5 HOH A 141 641 550 HOH HOH . F 5 HOH A 142 642 551 HOH HOH . F 5 HOH A 143 643 552 HOH HOH . F 5 HOH A 144 644 553 HOH HOH . F 5 HOH A 145 645 554 HOH HOH . F 5 HOH A 146 646 555 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C29 3GF . . . D 3 34.966 69.164 17.713 1 87.42 ? C29 3GF 403 A 1 HETATM 2 N N26 3GF . . . D 3 35.194 67.708 17.857 1 84.01 ? N26 3GF 403 A 1 HETATM 3 C C27 3GF . . . D 3 36.237 67.217 16.926 1 76.69 ? C27 3GF 403 A 1 HETATM 4 C C28 3GF . . . D 3 37.623 67.743 17.301 1 81.39 ? C28 3GF 403 A 1 HETATM 5 N N18 3GF . . . D 3 37.843 67.338 18.691 1 78.9 ? N18 3GF 403 A 1 HETATM 6 C C24 3GF . . . D 3 36.895 67.831 19.694 1 81.38 ? C24 3GF 403 A 1 HETATM 7 C C25 3GF . . . D 3 35.505 67.352 19.263 1 84.6 ? C25 3GF 403 A 1 HETATM 8 C C14 3GF . . . D 3 38.887 66.465 19.076 1 62.56 ? C14 3GF 403 A 1 HETATM 9 C C15 3GF . . . D 3 39.774 65.903 18.162 1 55.2 ? C15 3GF 403 A 1 HETATM 10 C C16 3GF . . . D 3 40.779 65.013 18.561 1 50.71 ? C16 3GF 403 A 1 HETATM 11 C C17 3GF . . . D 3 41.684 64.539 17.472 1 50.2 ? C17 3GF 403 A 1 HETATM 12 C C19 3GF . . . D 3 43.065 64.464 17.673 1 51.73 ? C19 3GF 403 A 1 HETATM 13 C C20 3GF . . . D 3 43.879 64.059 16.628 1 50.55 ? C20 3GF 403 A 1 HETATM 14 N N21 3GF . . . D 3 43.351 63.78 15.429 1 58.02 ? N21 3GF 403 A 1 HETATM 15 C C22 3GF . . . D 3 42.034 63.86 15.195 1 56.61 ? C22 3GF 403 A 1 HETATM 16 C C23 3GF . . . D 3 41.172 64.25 16.213 1 51.04 ? C23 3GF 403 A 1 HETATM 17 C C11 3GF . . . D 3 40.926 64.74 19.926 1 49.94 ? C11 3GF 403 A 1 HETATM 18 N N12 3GF . . . D 3 40.034 65.274 20.789 1 50.27 ? N12 3GF 403 A 1 HETATM 19 N N13 3GF . . . D 3 39.024 66.14 20.375 1 55.13 ? N13 3GF 403 A 1 HETATM 20 C C8 3GF . . . D 3 41.856 63.786 20.576 1 50.81 ? C8 3GF 403 A 1 HETATM 21 C C7 3GF . . . D 3 42.293 64.015 21.88 1 45.93 ? C7 3GF 403 A 1 HETATM 22 C C6 3GF . . . D 3 43.088 63.062 22.504 1 46.67 ? C6 3GF 403 A 1 HETATM 23 C C5 3GF . . . D 3 43.585 63.264 23.777 1 52.04 ? C5 3GF 403 A 1 HETATM 24 C C4 3GF . . . D 3 44.389 62.293 24.372 1 53.33 ? C4 3GF 403 A 1 HETATM 25 C C3 3GF . . . D 3 44.698 61.109 23.705 1 50.13 ? C3 3GF 403 A 1 HETATM 26 C C2 3GF . . . D 3 44.216 60.855 22.436 1 45.6 ? C2 3GF 403 A 1 HETATM 27 C C1 3GF . . . D 3 43.421 61.804 21.813 1 45.88 ? C1 3GF 403 A 1 HETATM 28 C C10 3GF . . . D 3 42.931 61.595 20.545 1 47.8 ? C10 3GF 403 A 1 HETATM 29 C C9 3GF . . . D 3 42.135 62.567 19.943 1 47.97 ? C9 3GF 403 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 29 #