data_4R3E # _model_server_result.job_id GUxk1tgIPBcQP4Sq3aqCmw _model_server_result.datetime_utc '2024-11-25 19:34:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4r3e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4R3E # _exptl.entry_id 4R3E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4R3E _cell.length_a 85.86 _cell.length_b 85.86 _cell.length_c 55.02 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4R3E _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 4R3E _atom_sites.fract_transf_matrix[1][1] 0.011647 _atom_sites.fract_transf_matrix[1][2] 0.006724 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013449 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018175 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 401 1 GOL GOL . C 2 GOL A 1 402 2 GOL GOL . D 2 GOL A 1 403 3 GOL GOL . E 3 HOH A 1 501 1 HOH HOH . E 3 HOH A 2 502 2 HOH HOH . E 3 HOH A 3 503 3 HOH HOH . E 3 HOH A 4 504 4 HOH HOH . E 3 HOH A 5 505 5 HOH HOH . E 3 HOH A 6 506 6 HOH HOH . E 3 HOH A 7 507 7 HOH HOH . E 3 HOH A 8 508 8 HOH HOH . E 3 HOH A 9 509 9 HOH HOH . E 3 HOH A 10 510 10 HOH HOH . E 3 HOH A 11 511 11 HOH HOH . E 3 HOH A 12 512 12 HOH HOH . E 3 HOH A 13 513 15 HOH HOH . E 3 HOH A 14 514 16 HOH HOH . E 3 HOH A 15 515 17 HOH HOH . E 3 HOH A 16 516 18 HOH HOH . E 3 HOH A 17 517 19 HOH HOH . E 3 HOH A 18 518 20 HOH HOH . E 3 HOH A 19 519 21 HOH HOH . E 3 HOH A 20 520 22 HOH HOH . E 3 HOH A 21 521 24 HOH HOH . E 3 HOH A 22 522 25 HOH HOH . E 3 HOH A 23 523 26 HOH HOH . E 3 HOH A 24 524 27 HOH HOH . E 3 HOH A 25 525 29 HOH HOH . E 3 HOH A 26 526 30 HOH HOH . E 3 HOH A 27 527 31 HOH HOH . E 3 HOH A 28 528 32 HOH HOH . E 3 HOH A 29 529 33 HOH HOH . E 3 HOH A 30 530 34 HOH HOH . E 3 HOH A 31 531 35 HOH HOH . E 3 HOH A 32 532 36 HOH HOH . E 3 HOH A 33 533 37 HOH HOH . E 3 HOH A 34 534 38 HOH HOH . E 3 HOH A 35 535 39 HOH HOH . E 3 HOH A 36 536 40 HOH HOH . E 3 HOH A 37 537 41 HOH HOH . E 3 HOH A 38 538 43 HOH HOH . E 3 HOH A 39 539 45 HOH HOH . E 3 HOH A 40 540 46 HOH HOH . E 3 HOH A 41 541 47 HOH HOH . E 3 HOH A 42 542 48 HOH HOH . E 3 HOH A 43 543 49 HOH HOH . E 3 HOH A 44 544 50 HOH HOH . E 3 HOH A 45 545 51 HOH HOH . E 3 HOH A 46 546 52 HOH HOH . E 3 HOH A 47 547 53 HOH HOH . E 3 HOH A 48 548 54 HOH HOH . E 3 HOH A 49 549 55 HOH HOH . E 3 HOH A 50 550 56 HOH HOH . E 3 HOH A 51 551 57 HOH HOH . E 3 HOH A 52 552 58 HOH HOH . E 3 HOH A 53 553 59 HOH HOH . E 3 HOH A 54 554 60 HOH HOH . E 3 HOH A 55 555 61 HOH HOH . E 3 HOH A 56 556 62 HOH HOH . E 3 HOH A 57 557 63 HOH HOH . E 3 HOH A 58 558 64 HOH HOH . E 3 HOH A 59 559 65 HOH HOH . E 3 HOH A 60 560 66 HOH HOH . E 3 HOH A 61 561 67 HOH HOH . E 3 HOH A 62 562 68 HOH HOH . E 3 HOH A 63 563 69 HOH HOH . E 3 HOH A 64 564 70 HOH HOH . E 3 HOH A 65 565 71 HOH HOH . E 3 HOH A 66 566 72 HOH HOH . E 3 HOH A 67 567 73 HOH HOH . E 3 HOH A 68 568 74 HOH HOH . E 3 HOH A 69 569 75 HOH HOH . E 3 HOH A 70 570 76 HOH HOH . E 3 HOH A 71 571 77 HOH HOH . E 3 HOH A 72 572 78 HOH HOH . E 3 HOH A 73 573 79 HOH HOH . E 3 HOH A 74 574 80 HOH HOH . E 3 HOH A 75 575 82 HOH HOH . E 3 HOH A 76 576 83 HOH HOH . E 3 HOH A 77 577 86 HOH HOH . E 3 HOH A 78 578 87 HOH HOH . E 3 HOH A 79 579 88 HOH HOH . E 3 HOH A 80 580 89 HOH HOH . E 3 HOH A 81 581 90 HOH HOH . E 3 HOH A 82 582 91 HOH HOH . E 3 HOH A 83 583 92 HOH HOH . E 3 HOH A 84 584 93 HOH HOH . E 3 HOH A 85 585 96 HOH HOH . E 3 HOH A 86 586 97 HOH HOH . E 3 HOH A 87 587 98 HOH HOH . E 3 HOH A 88 588 99 HOH HOH . E 3 HOH A 89 589 100 HOH HOH . E 3 HOH A 90 590 101 HOH HOH . E 3 HOH A 91 591 102 HOH HOH . E 3 HOH A 92 592 103 HOH HOH . E 3 HOH A 93 593 104 HOH HOH . E 3 HOH A 94 594 105 HOH HOH . E 3 HOH A 95 595 106 HOH HOH . E 3 HOH A 96 596 107 HOH HOH . E 3 HOH A 97 597 108 HOH HOH . E 3 HOH A 98 598 109 HOH HOH . E 3 HOH A 99 599 110 HOH HOH . E 3 HOH A 100 600 111 HOH HOH . E 3 HOH A 101 601 112 HOH HOH . E 3 HOH A 102 602 113 HOH HOH . E 3 HOH A 103 603 114 HOH HOH . E 3 HOH A 104 604 115 HOH HOH . E 3 HOH A 105 605 116 HOH HOH . E 3 HOH A 106 606 117 HOH HOH . E 3 HOH A 107 607 118 HOH HOH . E 3 HOH A 108 608 119 HOH HOH . E 3 HOH A 109 609 120 HOH HOH . E 3 HOH A 110 610 121 HOH HOH . E 3 HOH A 111 611 122 HOH HOH . E 3 HOH A 112 612 123 HOH HOH . E 3 HOH A 113 613 124 HOH HOH . E 3 HOH A 114 614 125 HOH HOH . E 3 HOH A 115 615 126 HOH HOH . E 3 HOH A 116 616 127 HOH HOH . E 3 HOH A 117 617 128 HOH HOH . E 3 HOH A 118 618 129 HOH HOH . E 3 HOH A 119 619 130 HOH HOH . E 3 HOH A 120 620 131 HOH HOH . E 3 HOH A 121 621 132 HOH HOH . E 3 HOH A 122 622 133 HOH HOH . E 3 HOH A 123 623 134 HOH HOH . E 3 HOH A 124 624 135 HOH HOH . E 3 HOH A 125 625 137 HOH HOH . E 3 HOH A 126 626 138 HOH HOH . E 3 HOH A 127 627 139 HOH HOH . E 3 HOH A 128 628 141 HOH HOH . E 3 HOH A 129 629 142 HOH HOH . E 3 HOH A 130 630 143 HOH HOH . E 3 HOH A 131 631 144 HOH HOH . E 3 HOH A 132 632 145 HOH HOH . E 3 HOH A 133 633 146 HOH HOH . E 3 HOH A 134 634 147 HOH HOH . E 3 HOH A 135 635 148 HOH HOH . E 3 HOH A 136 636 149 HOH HOH . E 3 HOH A 137 637 150 HOH HOH . E 3 HOH A 138 638 152 HOH HOH . E 3 HOH A 139 639 154 HOH HOH . E 3 HOH A 140 640 155 HOH HOH . E 3 HOH A 141 641 156 HOH HOH . E 3 HOH A 142 642 157 HOH HOH . E 3 HOH A 143 643 158 HOH HOH . E 3 HOH A 144 644 159 HOH HOH . E 3 HOH A 145 645 160 HOH HOH . E 3 HOH A 146 646 161 HOH HOH . E 3 HOH A 147 647 162 HOH HOH . E 3 HOH A 148 648 163 HOH HOH . E 3 HOH A 149 649 164 HOH HOH . E 3 HOH A 150 650 165 HOH HOH . E 3 HOH A 151 651 166 HOH HOH . E 3 HOH A 152 652 167 HOH HOH . E 3 HOH A 153 653 168 HOH HOH . E 3 HOH A 154 654 170 HOH HOH . E 3 HOH A 155 655 172 HOH HOH . E 3 HOH A 156 656 173 HOH HOH . E 3 HOH A 157 657 174 HOH HOH . E 3 HOH A 158 658 175 HOH HOH . E 3 HOH A 159 659 176 HOH HOH . E 3 HOH A 160 660 177 HOH HOH . E 3 HOH A 161 661 178 HOH HOH . E 3 HOH A 162 662 179 HOH HOH . E 3 HOH A 163 663 180 HOH HOH . E 3 HOH A 164 664 181 HOH HOH . E 3 HOH A 165 665 182 HOH HOH . E 3 HOH A 166 666 184 HOH HOH . E 3 HOH A 167 667 186 HOH HOH . E 3 HOH A 168 668 187 HOH HOH . E 3 HOH A 169 669 188 HOH HOH . E 3 HOH A 170 670 189 HOH HOH . E 3 HOH A 171 671 190 HOH HOH . E 3 HOH A 172 672 191 HOH HOH . E 3 HOH A 173 673 192 HOH HOH . E 3 HOH A 174 674 193 HOH HOH . E 3 HOH A 175 675 194 HOH HOH . E 3 HOH A 176 676 195 HOH HOH . E 3 HOH A 177 677 196 HOH HOH . E 3 HOH A 178 678 197 HOH HOH . E 3 HOH A 179 679 198 HOH HOH . E 3 HOH A 180 680 199 HOH HOH . E 3 HOH A 181 681 200 HOH HOH . E 3 HOH A 182 682 201 HOH HOH . E 3 HOH A 183 683 202 HOH HOH . E 3 HOH A 184 684 203 HOH HOH . E 3 HOH A 185 685 204 HOH HOH . E 3 HOH A 186 686 205 HOH HOH . E 3 HOH A 187 687 206 HOH HOH . E 3 HOH A 188 688 207 HOH HOH . E 3 HOH A 189 689 208 HOH HOH . E 3 HOH A 190 690 209 HOH HOH . E 3 HOH A 191 691 210 HOH HOH . E 3 HOH A 192 692 211 HOH HOH . E 3 HOH A 193 693 212 HOH HOH . E 3 HOH A 194 694 213 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 27.041 -36.779 8.571 1 26.8 ? C1 GOL 401 A 1 HETATM 2 O O1 GOL . . . B 2 25.825 -36.875 9.339 1 25.62 ? O1 GOL 401 A 1 HETATM 3 C C2 GOL . . . B 2 28.001 -37.915 8.908 1 27.24 ? C2 GOL 401 A 1 HETATM 4 O O2 GOL . . . B 2 27.335 -38.913 9.696 1 26.4 ? O2 GOL 401 A 1 HETATM 5 C C3 GOL . . . B 2 28.602 -38.561 7.67 1 27.65 ? C3 GOL 401 A 1 HETATM 6 O O3 GOL . . . B 2 29.157 -39.835 8.003 1 27.56 ? O3 GOL 401 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 470 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #