data_4R3L # _model_server_result.job_id sDyLp7_7_e_B7n2YhzH3dw _model_server_result.datetime_utc '2024-11-02 09:30:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4r3l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":400}' # _entry.id 4R3L # _exptl.entry_id 4R3L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4R3L _cell.length_a 35.185 _cell.length_b 58.004 _cell.length_c 84.109 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4R3L _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 4R3L _atom_sites.fract_transf_matrix[1][1] 0.028421 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01724 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011889 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 COA A 1 400 400 COA COA . D 4 HOH A 1 501 1 HOH HOH . D 4 HOH A 2 502 2 HOH HOH . D 4 HOH A 3 503 3 HOH HOH . D 4 HOH A 4 504 4 HOH HOH . D 4 HOH A 5 505 5 HOH HOH . D 4 HOH A 6 506 6 HOH HOH . D 4 HOH A 7 507 7 HOH HOH . D 4 HOH A 8 508 8 HOH HOH . D 4 HOH A 9 509 9 HOH HOH . D 4 HOH A 10 510 10 HOH HOH . D 4 HOH A 11 511 11 HOH HOH . D 4 HOH A 12 512 12 HOH HOH . D 4 HOH A 13 513 13 HOH HOH . D 4 HOH A 14 514 14 HOH HOH . D 4 HOH A 15 515 15 HOH HOH . D 4 HOH A 16 516 16 HOH HOH . D 4 HOH A 17 517 17 HOH HOH . D 4 HOH A 18 518 18 HOH HOH . D 4 HOH A 19 519 19 HOH HOH . D 4 HOH A 20 520 20 HOH HOH . D 4 HOH A 21 521 21 HOH HOH . D 4 HOH A 22 522 22 HOH HOH . D 4 HOH A 23 523 23 HOH HOH . D 4 HOH A 24 524 24 HOH HOH . D 4 HOH A 25 525 25 HOH HOH . D 4 HOH A 26 526 26 HOH HOH . D 4 HOH A 27 527 27 HOH HOH . D 4 HOH A 28 528 28 HOH HOH . D 4 HOH A 29 529 29 HOH HOH . D 4 HOH A 30 530 30 HOH HOH . D 4 HOH A 31 531 31 HOH HOH . D 4 HOH A 32 532 32 HOH HOH . D 4 HOH A 33 533 33 HOH HOH . D 4 HOH A 34 534 34 HOH HOH . D 4 HOH A 35 535 35 HOH HOH . D 4 HOH A 36 536 36 HOH HOH . D 4 HOH A 37 537 37 HOH HOH . D 4 HOH A 38 538 38 HOH HOH . D 4 HOH A 39 539 39 HOH HOH . D 4 HOH A 40 540 40 HOH HOH . D 4 HOH A 41 541 41 HOH HOH . D 4 HOH A 42 542 42 HOH HOH . D 4 HOH A 43 543 43 HOH HOH . D 4 HOH A 44 544 44 HOH HOH . D 4 HOH A 45 545 45 HOH HOH . D 4 HOH A 46 546 46 HOH HOH . D 4 HOH A 47 547 47 HOH HOH . D 4 HOH A 48 548 48 HOH HOH . D 4 HOH A 49 549 49 HOH HOH . D 4 HOH A 50 550 50 HOH HOH . D 4 HOH A 51 551 51 HOH HOH . D 4 HOH A 52 552 52 HOH HOH . D 4 HOH A 53 553 53 HOH HOH . D 4 HOH A 54 554 54 HOH HOH . D 4 HOH A 55 555 55 HOH HOH . D 4 HOH A 56 556 56 HOH HOH . D 4 HOH A 57 557 57 HOH HOH . D 4 HOH A 58 558 58 HOH HOH . D 4 HOH A 59 559 59 HOH HOH . D 4 HOH A 60 560 60 HOH HOH . D 4 HOH A 61 561 61 HOH HOH . D 4 HOH A 62 562 62 HOH HOH . D 4 HOH A 63 563 63 HOH HOH . D 4 HOH A 64 564 64 HOH HOH . D 4 HOH A 65 565 65 HOH HOH . D 4 HOH A 66 566 66 HOH HOH . D 4 HOH A 67 567 67 HOH HOH . D 4 HOH A 68 568 68 HOH HOH . D 4 HOH A 69 569 69 HOH HOH . D 4 HOH A 70 570 70 HOH HOH . D 4 HOH A 71 571 71 HOH HOH . D 4 HOH A 72 572 72 HOH HOH . D 4 HOH A 73 573 73 HOH HOH . D 4 HOH A 74 574 74 HOH HOH . D 4 HOH A 75 575 75 HOH HOH . D 4 HOH A 76 576 76 HOH HOH . D 4 HOH A 77 577 77 HOH HOH . D 4 HOH A 78 578 78 HOH HOH . D 4 HOH A 79 579 79 HOH HOH . D 4 HOH A 80 580 80 HOH HOH . D 4 HOH A 81 581 81 HOH HOH . D 4 HOH A 82 582 82 HOH HOH . D 4 HOH A 83 583 83 HOH HOH . D 4 HOH A 84 584 84 HOH HOH . D 4 HOH A 85 585 85 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . C 3 16.034 53.659 11.215 1 42.62 ? N1A COA 400 A 1 HETATM 2 C C2A COA . . . C 3 15.308 52.73 10.559 1 47.28 ? C2A COA 400 A 1 HETATM 3 N N3A COA . . . C 3 14.015 52.55 10.837 1 46.38 ? N3A COA 400 A 1 HETATM 4 C C4A COA . . . C 3 13.397 53.304 11.798 1 41.82 ? C4A COA 400 A 1 HETATM 5 C C5A COA . . . C 3 14.116 54.266 12.492 1 38.55 ? C5A COA 400 A 1 HETATM 6 C C6A COA . . . C 3 15.474 54.433 12.178 1 42.09 ? C6A COA 400 A 1 HETATM 7 N N6A COA . . . C 3 16.268 55.435 12.881 1 39.79 ? N6A COA 400 A 1 HETATM 8 N N7A COA . . . C 3 13.243 54.868 13.39 1 38.31 ? N7A COA 400 A 1 HETATM 9 C C8A COA . . . C 3 12.024 54.278 13.244 1 37.36 ? C8A COA 400 A 1 HETATM 10 N N9A COA . . . C 3 12.099 53.339 12.28 1 36.93 ? N9A COA 400 A 1 HETATM 11 C C1B COA . . . C 3 11.017 52.452 11.822 1 43.06 ? C1B COA 400 A 1 HETATM 12 C C2B COA . . . C 3 11.279 51.067 12.266 1 44.21 ? C2B COA 400 A 1 HETATM 13 O O2B COA . . . C 3 10.717 50.158 11.388 1 44.25 ? O2B COA 400 A 1 HETATM 14 C C3B COA . . . C 3 10.563 50.995 13.518 1 40.72 ? C3B COA 400 A 1 HETATM 15 O O3B COA . . . C 3 10.357 49.678 13.843 1 46.55 ? O3B COA 400 A 1 HETATM 16 P P3B COA . . . C 3 11.344 48.965 14.832 1 57.95 ? P3B COA 400 A 1 HETATM 17 O O7A COA . . . C 3 10.712 47.682 15.369 1 57.29 ? O7A COA 400 A 1 HETATM 18 O O8A COA . . . C 3 11.629 49.866 15.968 1 43.01 ? O8A COA 400 A 1 HETATM 19 O O9A COA . . . C 3 12.622 48.641 14.12 1 50.17 ? O9A COA 400 A 1 HETATM 20 C C4B COA . . . C 3 9.314 51.696 13.172 1 38.69 ? C4B COA 400 A 1 HETATM 21 O O4B COA . . . C 3 9.741 52.788 12.396 1 36.14 ? O4B COA 400 A 1 HETATM 22 C C5B COA . . . C 3 8.622 52.216 14.361 1 36.19 ? C5B COA 400 A 1 HETATM 23 O O5B COA . . . C 3 9.288 53.295 14.954 1 30.71 ? O5B COA 400 A 1 HETATM 24 P P1A COA . . . C 3 8.859 54.013 16.294 1 27.49 ? P1A COA 400 A 1 HETATM 25 O O1A COA . . . C 3 9.6 53.45 17.476 1 26.39 ? O1A COA 400 A 1 HETATM 26 O O2A COA . . . C 3 7.396 53.932 16.45 1 23.34 ? O2A COA 400 A 1 HETATM 27 O O3A COA . . . C 3 9.364 55.506 16.037 1 26.02 ? O3A COA 400 A 1 HETATM 28 P P2A COA . . . C 3 10.012 56.47 17.104 1 28.07 ? P2A COA 400 A 1 HETATM 29 O O4A COA . . . C 3 11.465 56.12 17.382 1 30.16 ? O4A COA 400 A 1 HETATM 30 O O5A COA . . . C 3 9.191 56.498 18.354 1 24.42 ? O5A COA 400 A 1 HETATM 31 O O6A COA . . . C 3 9.979 57.945 16.464 1 24.89 ? O6A COA 400 A 1 HETATM 32 C CBP COA . . . C 3 10.494 59.545 14.694 1 22.34 ? CBP COA 400 A 1 HETATM 33 C CCP COA . . . C 3 10.174 58.076 15.105 1 27.64 ? CCP COA 400 A 1 HETATM 34 C CDP COA . . . C 3 10.78 59.594 13.217 1 26.28 ? CDP COA 400 A 1 HETATM 35 C CEP COA . . . C 3 9.265 60.388 15.028 1 25.61 ? CEP COA 400 A 1 HETATM 36 C CAP COA . . . C 3 11.692 59.948 15.524 1 29.45 ? CAP COA 400 A 1 HETATM 37 O OAP COA . . . C 3 12.916 59.375 15.059 1 29.36 ? OAP COA 400 A 1 HETATM 38 C C9P COA . . . C 3 11.937 61.443 15.601 1 26.2 ? C9P COA 400 A 1 HETATM 39 O O9P COA . . . C 3 11.331 62.15 16.449 1 27.72 ? O9P COA 400 A 1 HETATM 40 N N8P COA . . . C 3 12.888 62.106 14.735 1 28.73 ? N8P COA 400 A 1 HETATM 41 C C7P COA . . . C 3 13.153 63.541 14.779 1 30.22 ? C7P COA 400 A 1 HETATM 42 C C6P COA . . . C 3 11.909 64.407 14.427 1 34.65 ? C6P COA 400 A 1 HETATM 43 C C5P COA . . . C 3 11.269 64.001 13.102 1 31.66 ? C5P COA 400 A 1 HETATM 44 O O5P COA . . . C 3 12.014 63.841 12.101 1 31.23 ? O5P COA 400 A 1 HETATM 45 N N4P COA . . . C 3 9.824 63.78 13.018 1 30.42 ? N4P COA 400 A 1 HETATM 46 C C3P COA . . . C 3 9.217 63.38 11.764 1 30.71 ? C3P COA 400 A 1 HETATM 47 C C2P COA . . . C 3 9.202 64.388 10.622 1 40.76 ? C2P COA 400 A 1 HETATM 48 S S1P COA . . . C 3 8.119 64.093 9.261 1 52.53 ? S1P COA 400 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 48 #