data_4R4L # _model_server_result.job_id 9ueuabVPRci8JZqvAuXMIg _model_server_result.datetime_utc '2024-11-22 21:06:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4r4l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":101}' # _entry.id 4R4L # _exptl.entry_id 4R4L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEXANE-1,6-DIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4R4L _cell.length_a 95.926 _cell.length_b 95.926 _cell.length_c 63.805 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4R4L _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,F,G,H 1 1 C,I 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 11_555 -x+y,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 44 A CYS 42 1_555 B SG CYS 44 B CYS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 C SG CYS 44 C CYS 42 1_555 C SG CYS 44 C CYS 42 11_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id HEZ _chem_comp.mon_nstd_flag . _chem_comp.name HEXANE-1,6-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 HEZ sing 113 n n O1 HO1 HEZ sing 114 n n C1 C2 HEZ sing 115 n n C1 H11 HEZ sing 116 n n C1 H12 HEZ sing 117 n n C2 C3 HEZ sing 118 n n C2 H21 HEZ sing 119 n n C2 H22 HEZ sing 120 n n C3 C4 HEZ sing 121 n n C3 H31 HEZ sing 122 n n C3 H32 HEZ sing 123 n n C4 C5 HEZ sing 124 n n C4 H41 HEZ sing 125 n n C4 H42 HEZ sing 126 n n C5 C6 HEZ sing 127 n n C5 H51 HEZ sing 128 n n C5 H52 HEZ sing 129 n n C6 O6 HEZ sing 130 n n C6 H61 HEZ sing 131 n n C6 H62 HEZ sing 132 n n O6 HO6 HEZ sing 133 n n # _atom_sites.entry_id 4R4L _atom_sites.fract_transf_matrix[1][1] 0.010425 _atom_sites.fract_transf_matrix[1][2] 0.006019 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012037 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015673 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 HEZ A 1 101 1 HEZ HEZ . E 2 HEZ A 1 102 2 HEZ HEZ . F 3 SO4 B 1 101 1 SO4 S . G 4 HOH A 1 201 1 HOH HOH . G 4 HOH A 2 202 6 HOH HOH . G 4 HOH A 3 203 10 HOH HOH . G 4 HOH A 4 204 20 HOH HOH . G 4 HOH A 5 205 23 HOH HOH . G 4 HOH A 6 206 34 HOH HOH . G 4 HOH A 7 207 37 HOH HOH . G 4 HOH A 8 208 38 HOH HOH . G 4 HOH A 9 209 39 HOH HOH . G 4 HOH A 10 210 40 HOH HOH . H 4 HOH B 1 201 25 HOH HOH . H 4 HOH B 2 202 41 HOH HOH . H 4 HOH B 3 203 2 HOH HOH . H 4 HOH B 4 204 3 HOH HOH . H 4 HOH B 5 205 5 HOH HOH . H 4 HOH B 6 206 8 HOH HOH . H 4 HOH B 7 207 11 HOH HOH . H 4 HOH B 8 208 19 HOH HOH . H 4 HOH B 9 209 26 HOH HOH . H 4 HOH B 10 210 27 HOH HOH . H 4 HOH B 11 211 30 HOH HOH . H 4 HOH B 12 212 36 HOH HOH . I 4 HOH C 1 101 4 HOH HOH . I 4 HOH C 2 102 9 HOH HOH . I 4 HOH C 3 103 14 HOH HOH . I 4 HOH C 4 104 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 HEZ . . . D 2 11.618 3.487 -13.328 1 69.63 ? O1 HEZ 101 A 1 HETATM 2 C C1 HEZ . . . D 2 11.269 4.751 -12.808 1 69.77 ? C1 HEZ 101 A 1 HETATM 3 C C2 HEZ . . . D 2 11.692 5.822 -13.79 1 69.33 ? C2 HEZ 101 A 1 HETATM 4 C C3 HEZ . . . D 2 11.328 7.188 -13.245 1 68.45 ? C3 HEZ 101 A 1 HETATM 5 C C4 HEZ . . . D 2 11.991 8.286 -14.053 1 67.7 ? C4 HEZ 101 A 1 HETATM 6 C C5 HEZ . . . D 2 13.487 8.305 -13.808 1 65.88 ? C5 HEZ 101 A 1 HETATM 7 C C6 HEZ . . . D 2 14.119 9.492 -14.502 1 64.97 ? C6 HEZ 101 A 1 HETATM 8 O O6 HEZ . . . D 2 15.501 9.503 -14.218 1 64.54 ? O6 HEZ 101 A 1 HETATM 9 H HO1 HEZ . . . D 2 11.501 2.867 -12.703 1 83.56 ? HO1 HEZ 101 A 1 HETATM 10 H H11 HEZ . . . D 2 10.303 4.794 -12.673 1 83.73 ? H11 HEZ 101 A 1 HETATM 11 H H12 HEZ . . . D 2 11.724 4.892 -11.956 1 83.73 ? H12 HEZ 101 A 1 HETATM 12 H H21 HEZ . . . D 2 11.241 5.68 -14.643 1 83.19 ? H21 HEZ 101 A 1 HETATM 13 H H22 HEZ . . . D 2 12.658 5.773 -13.921 1 83.19 ? H22 HEZ 101 A 1 HETATM 14 H H31 HEZ . . . D 2 10.359 7.295 -13.293 1 82.14 ? H31 HEZ 101 A 1 HETATM 15 H H32 HEZ . . . D 2 11.616 7.254 -12.315 1 82.14 ? H32 HEZ 101 A 1 HETATM 16 H H41 HEZ . . . D 2 11.823 8.141 -15.004 1 81.23 ? H41 HEZ 101 A 1 HETATM 17 H H42 HEZ . . . D 2 11.617 9.15 -13.798 1 81.23 ? H42 HEZ 101 A 1 HETATM 18 H H51 HEZ . . . D 2 13.66 8.366 -12.849 1 79.05 ? H51 HEZ 101 A 1 HETATM 19 H H52 HEZ . . . D 2 13.886 7.482 -14.147 1 79.05 ? H52 HEZ 101 A 1 HETATM 20 H H61 HEZ . . . D 2 13.984 9.418 -15.466 1 77.96 ? H61 HEZ 101 A 1 HETATM 21 H H62 HEZ . . . D 2 13.712 10.317 -14.176 1 77.96 ? H62 HEZ 101 A 1 HETATM 22 H HO6 HEZ . . . D 2 15.892 10.158 -14.673 1 77.45 ? HO6 HEZ 101 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 368 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #