data_4R69 # _model_server_result.job_id VocbrW11fAOjgThZ3G7QYg _model_server_result.datetime_utc '2024-11-08 09:09:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4r69 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":401}' # _entry.id 4R69 # _exptl.entry_id 4R69 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.49 _cell.angle_gamma 90 _cell.entry_id 4R69 _cell.length_a 75.007 _cell.length_b 80.682 _cell.length_c 101.983 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4R69 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 K N N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 4R69 _atom_sites.fract_transf_matrix[1][1] 0.013332 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001517 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012394 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009869 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 EPE A 1 401 802 EPE EPE . F 3 NAI A 1 402 801 NAI NAI . G 4 W13 A 1 403 1 W13 DRG . H 2 EPE B 1 401 802 EPE EPE . I 3 NAI B 1 402 801 NAI NAI . J 4 W13 B 1 403 1 W13 DRG . K 2 EPE C 1 401 802 EPE EPE . L 3 NAI C 1 402 801 NAI NAI . M 4 W13 C 1 403 1 W13 DRG . N 3 NAI D 1 801 801 NAI NAI . O 5 SO4 D 1 802 1 SO4 SO4 . P 4 W13 D 1 803 1 W13 DRG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . H 2 34.238 -34.266 31.363 0.87 58.08 ? N1 EPE 401 B 1 HETATM 2 C C2 EPE . . . H 2 35.374 -34.866 30.642 0.87 58.88 ? C2 EPE 401 B 1 HETATM 3 C C3 EPE . . . H 2 36.661 -34.679 31.421 0.87 59.35 ? C3 EPE 401 B 1 HETATM 4 N N4 EPE . . . H 2 36.552 -35.297 32.749 0.87 59.4 ? N4 EPE 401 B 1 HETATM 5 C C5 EPE . . . H 2 35.433 -34.687 33.481 0.87 58.43 ? C5 EPE 401 B 1 HETATM 6 C C6 EPE . . . H 2 34.129 -34.856 32.707 0.87 58.31 ? C6 EPE 401 B 1 HETATM 7 C C7 EPE . . . H 2 37.812 -35.19 33.496 0.87 60.19 ? C7 EPE 401 B 1 HETATM 8 C C8 EPE . . . H 2 38.587 -36.492 33.557 0.87 60.44 ? C8 EPE 401 B 1 HETATM 9 O O8 EPE . . . H 2 39.041 -36.888 32.27 0.87 60.17 ? O8 EPE 401 B 1 HETATM 10 C C9 EPE . . . H 2 32.965 -34.373 30.62 0.87 56.63 ? C9 EPE 401 B 1 HETATM 11 C C10 EPE . . . H 2 32.99 -35.218 29.353 0.87 55.11 ? C10 EPE 401 B 1 HETATM 12 S S EPE . . . H 2 32.047 -34.598 28.059 0.87 53.3 ? S EPE 401 B 1 HETATM 13 O O1S EPE . . . H 2 32.299 -35.452 26.917 0.87 52.32 ? O1S EPE 401 B 1 HETATM 14 O O2S EPE . . . H 2 32.475 -33.233 27.847 0.87 52.91 ? O2S EPE 401 B 1 HETATM 15 O O3S EPE . . . H 2 30.656 -34.671 28.5 0.87 53.35 ? O3S EPE 401 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 232 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #