data_4R69
#
_model_server_result.job_id            XV9yEcjxMx9ZsZzR7-k15Q 
_model_server_result.datetime_utc      '2024-11-08 09:03:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4r69 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":403}' 
#
_entry.id    4R69 
#
_exptl.entry_id    4R69 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              498.85 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (5R)-2-[(2-chlorophenyl)sulfanyl]-5-[2,6-dichloro-3-(tetrahydro-2H-pyran-4-ylamino)phenyl]-3-hydroxycyclohex-2-en-1-one 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          96.49 
_cell.angle_gamma         90 
_cell.entry_id            4R69 
_cell.length_a            75.007 
_cell.length_b            80.682 
_cell.length_c            101.983 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4R69 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 J N N 
? 4 M N N 
? 4 P N N 
#
_chem_comp.formula           'C23 H22 Cl3 N O3 S' 
_chem_comp.formula_weight    498.85 
_chem_comp.id                W13 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (5R)-2-[(2-chlorophenyl)sulfanyl]-5-[2,6-dichloro-3-(tetrahydro-2H-pyran-4-ylamino)phenyl]-3-hydroxycyclohex-2-en-1-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CL1 C2 W13 sing 488 n n 
C3 C4 W13 doub 489 n y 
C3 C2 W13 sing 490 n y 
C4 C5 W13 sing 491 n y 
C2 C15 W13 doub 492 n y 
C9 C8 W13 sing 493 n n 
C9 O10 W13 sing 494 n n 
C8 C7 W13 sing 495 n n 
O10 C11 W13 sing 496 n n 
C11 C12 W13 sing 497 n n 
C5 C13 W13 doub 498 n y 
C5 N6 W13 sing 499 n n 
C12 C7 W13 sing 500 n n 
C15 C13 W13 sing 501 n y 
C15 C16 W13 sing 502 n n 
C17 C16 W13 sing 503 n n 
C17 C18 W13 sing 504 n n 
C7 N6 W13 sing 505 n n 
C13 CL14 W13 sing 506 n n 
C16 C30 W13 sing 507 n n 
O31 C18 W13 doub 508 n n 
C18 C19 W13 sing 509 n n 
C30 C28 W13 sing 510 n n 
C19 C28 W13 doub 511 n n 
C19 S20 W13 sing 512 n n 
C28 O29 W13 sing 513 n n 
S20 C21 W13 sing 514 n n 
C27 C21 W13 doub 515 n y 
C27 C26 W13 sing 516 n y 
C21 C22 W13 sing 517 n y 
C26 C25 W13 doub 518 n y 
C22 CL23 W13 sing 519 n n 
C22 C24 W13 doub 520 n y 
C25 C24 W13 sing 521 n y 
C4 H1 W13 sing 522 n n 
C11 H2 W13 sing 523 n n 
C11 H3 W13 sing 524 n n 
C7 H4 W13 sing 525 n n 
C8 H5 W13 sing 526 n n 
C8 H6 W13 sing 527 n n 
C9 H7 W13 sing 528 n n 
C9 H8 W13 sing 529 n n 
C12 H9 W13 sing 530 n n 
C12 H10 W13 sing 531 n n 
C3 H11 W13 sing 532 n n 
N6 H12 W13 sing 533 n n 
C16 H13 W13 sing 534 n n 
C17 H14 W13 sing 535 n n 
C17 H15 W13 sing 536 n n 
C24 H16 W13 sing 537 n n 
C25 H17 W13 sing 538 n n 
C26 H18 W13 sing 539 n n 
C27 H19 W13 sing 540 n n 
O29 H20 W13 sing 541 n n 
C30 H21 W13 sing 542 n n 
C30 H22 W13 sing 543 n n 
#
_atom_sites.entry_id                     4R69 
_atom_sites.fract_transf_matrix[1][1]    0.013332 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001517 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012394 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009869 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 EPE A 1 401 802 EPE EPE . 
F 3 NAI A 1 402 801 NAI NAI . 
G 4 W13 A 1 403 1 W13 DRG . 
H 2 EPE B 1 401 802 EPE EPE . 
I 3 NAI B 1 402 801 NAI NAI . 
J 4 W13 B 1 403 1 W13 DRG . 
K 2 EPE C 1 401 802 EPE EPE . 
L 3 NAI C 1 402 801 NAI NAI . 
M 4 W13 C 1 403 1 W13 DRG . 
N 3 NAI D 1 801 801 NAI NAI . 
O 5 SO4 D 1 802 1 SO4 SO4 . 
P 4 W13 D 1 803 1 W13 DRG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 W13 . . . M 4 -9.915 4.096 46.243 1 41.17 ? C4 W13 403 C 1 
HETATM 2 C C5 W13 . . . M 4 -9.363 5.249 46.812 1 42.98 ? C5 W13 403 C 1 
HETATM 3 C C11 W13 . . . M 4 -13.056 4.626 49.611 1 51.01 ? C11 W13 403 C 1 
HETATM 4 C C7 W13 . . . M 4 -11.455 6.085 48.165 1 48.7 ? C7 W13 403 C 1 
HETATM 5 C C8 W13 . . . M 4 -12.562 6.14 47.083 1 49.12 ? C8 W13 403 C 1 
HETATM 6 C C9 W13 . . . M 4 -13.925 5.569 47.534 1 49.87 ? C9 W13 403 C 1 
HETATM 7 C C12 W13 . . . M 4 -11.596 5.018 49.28 1 50.44 ? C12 W13 403 C 1 
HETATM 8 C C13 W13 . . . M 4 -8.008 5.515 46.565 1 41.93 ? C13 W13 403 C 1 
HETATM 9 C C3 W13 . . . M 4 -9.127 3.255 45.466 1 40.41 ? C3 W13 403 C 1 
HETATM 10 CL CL1 W13 . . . M 4 -6.889 2.423 44.217 1 42.24 ? CL1 W13 403 C 1 
HETATM 11 C C2 W13 . . . M 4 -7.777 3.514 45.246 1 40.8 ? C2 W13 403 C 1 
HETATM 12 N N6 W13 . . . M 4 -10.085 6.177 47.609 1 46.09 ? N6 W13 403 C 1 
HETATM 13 O O10 W13 . . . M 4 -14.034 5.461 48.964 1 50.48 ? O10 W13 403 C 1 
HETATM 14 CL CL14 W13 . . . M 4 -7.301 6.935 47.248 1 44.6 ? CL14 W13 403 C 1 
HETATM 15 C C15 W13 . . . M 4 -7.211 4.678 45.782 1 39.45 ? C15 W13 403 C 1 
HETATM 16 C C16 W13 . . . M 4 -5.755 5.066 45.61 1 35.81 ? C16 W13 403 C 1 
HETATM 17 C C17 W13 . . . M 4 -4.734 4.313 46.468 1 35.41 ? C17 W13 403 C 1 
HETATM 18 C C18 W13 . . . M 4 -3.466 5.144 46.512 1 35.54 ? C18 W13 403 C 1 
HETATM 19 C C19 W13 . . . M 4 -3.119 6.019 45.435 1 35.05 ? C19 W13 403 C 1 
HETATM 20 S S20 W13 . . . M 4 -1.628 6.969 45.537 1 34 ? S20 W13 403 C 1 
HETATM 21 C C21 W13 . . . M 4 -2.07 8.429 46.433 1 35.45 ? C21 W13 403 C 1 
HETATM 22 C C22 W13 . . . M 4 -1.226 9.554 46.423 1 37.53 ? C22 W13 403 C 1 
HETATM 23 CL CL23 W13 . . . M 4 0.284 9.551 45.551 1 40.14 ? CL23 W13 403 C 1 
HETATM 24 C C24 W13 . . . M 4 -1.6 10.704 47.117 1 36.62 ? C24 W13 403 C 1 
HETATM 25 C C25 W13 . . . M 4 -2.807 10.755 47.811 1 35.67 ? C25 W13 403 C 1 
HETATM 26 C C26 W13 . . . M 4 -3.636 9.639 47.836 1 35.76 ? C26 W13 403 C 1 
HETATM 27 C C27 W13 . . . M 4 -3.274 8.484 47.153 1 35.34 ? C27 W13 403 C 1 
HETATM 28 C C28 W13 . . . M 4 -3.918 6.154 44.333 1 35.44 ? C28 W13 403 C 1 
HETATM 29 O O29 W13 . . . M 4 -3.573 6.993 43.327 1 35.87 ? O29 W13 403 C 1 
HETATM 30 C C30 W13 . . . M 4 -5.228 5.403 44.212 1 34.7 ? C30 W13 403 C 1 
HETATM 31 O O31 W13 . . . M 4 -2.749 5.061 47.494 1 35.7 ? O31 W13 403 C 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           244 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           31 
#