data_4R86 # _model_server_result.job_id 24oJNc34U4rvAd9bXs9HPg _model_server_result.datetime_utc '2024-11-10 01:25:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4r86 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":402}' # _entry.id 4R86 # _exptl.entry_id 4R86 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4R86 _cell.length_a 91.167 _cell.length_b 91.167 _cell.length_c 147.402 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4R86 _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,H 1 1 B,E,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASN 37 A ASN 34 1_555 A N MSE 38 A MSE 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C MSE 38 A MSE 35 1_555 A N THR 39 A THR 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C LEU 44 A LEU 41 1_555 A N MSE 45 A MSE 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 A C MSE 45 A MSE 42 1_555 A N TYR 46 A TYR 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 A C TYR 46 A TYR 43 1_555 A N MSE 47 A MSE 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale6 A C MSE 47 A MSE 44 1_555 A N SER 48 A SER 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale7 A C ALA 83 A ALA 80 1_555 A N MSE 84 A MSE 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale8 A C MSE 84 A MSE 81 1_555 A N ARG 85 A ARG 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale9 A C SER 117 A SER 114 1_555 A N MSE 118 A MSE 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale10 A C MSE 118 A MSE 115 1_555 A N ASP 119 A ASP 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale11 A C SER 152 A SER 149 1_555 A N MSE 153 A MSE 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale12 A C MSE 153 A MSE 150 1_555 A N ARG 154 A ARG 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale13 A C GLN 166 A GLN 163 1_555 A N MSE 167 A MSE 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale14 A C MSE 167 A MSE 164 1_555 A N THR 168 A THR 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale15 A C GLU 268 A GLU 265 1_555 A N MSE 269 A MSE 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale16 A C MSE 269 A MSE 266 1_555 A N ALA 270 A ALA 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale17 B C ASN 37 B ASN 34 1_555 B N MSE 38 B MSE 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale18 B C MSE 38 B MSE 35 1_555 B N THR 39 B THR 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale19 B C LEU 44 B LEU 41 1_555 B N MSE 45 B MSE 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale20 B C MSE 45 B MSE 42 1_555 B N TYR 46 B TYR 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale21 B C TYR 46 B TYR 43 1_555 B N MSE 47 B MSE 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale22 B C MSE 47 B MSE 44 1_555 B N SER 48 B SER 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale23 B C ALA 83 B ALA 80 1_555 B N MSE 84 B MSE 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale24 B C MSE 84 B MSE 81 1_555 B N ARG 85 B ARG 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale25 B C SER 117 B SER 114 1_555 B N MSE 118 B MSE 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale26 B C MSE 118 B MSE 115 1_555 B N ASP 119 B ASP 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale27 B C SER 152 B SER 149 1_555 B N MSE 153 B MSE 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale28 B C MSE 153 B MSE 150 1_555 B N ARG 154 B ARG 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale29 B C GLN 166 B GLN 163 1_555 B N MSE 167 B MSE 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale30 B C MSE 167 B MSE 164 1_555 B N THR 168 B THR 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale31 B C GLU 268 B GLU 265 1_555 B N MSE 269 B MSE 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale32 B C MSE 269 B MSE 266 1_555 B N ALA 270 B ALA 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4R86 _atom_sites.fract_transf_matrix[1][1] 0.010969 _atom_sites.fract_transf_matrix[1][2] 0.006333 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012666 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006784 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BR A 1 401 350 BR BR . D 3 PEG A 1 402 351 PEG PEG . E 2 BR B 1 401 350 BR BR . F 3 PEG B 1 402 351 PEG PEG . G 4 EDO B 1 403 352 EDO EDO . H 5 HOH A 1 501 2 HOH HOH . H 5 HOH A 2 502 3 HOH HOH . H 5 HOH A 3 503 4 HOH HOH . H 5 HOH A 4 504 5 HOH HOH . I 5 HOH B 1 501 1 HOH HOH . I 5 HOH B 2 502 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . F 3 -39.039 -20.876 -18.605 1 27.14 ? C1 PEG 402 B 1 HETATM 2 O O1 PEG . . . F 3 -39.895 -21.137 -19.724 1 43.16 ? O1 PEG 402 B 1 HETATM 3 C C2 PEG . . . F 3 -39.524 -21.679 -17.405 1 30.28 ? C2 PEG 402 B 1 HETATM 4 O O2 PEG . . . F 3 -39.033 -21.083 -16.207 1 47.37 ? O2 PEG 402 B 1 HETATM 5 C C3 PEG . . . F 3 -39.784 -21.503 -15.071 1 43.94 ? C3 PEG 402 B 1 HETATM 6 C C4 PEG . . . F 3 -39.414 -20.639 -13.872 1 51.3 ? C4 PEG 402 B 1 HETATM 7 O O4 PEG . . . F 3 -40.296 -20.928 -12.781 1 49.06 ? O4 PEG 402 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #