data_4R8L # _model_server_result.job_id AxwkzcU3c5bQAYiUxcKNjA _model_server_result.datetime_utc '2024-11-17 18:22:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4r8l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":700}' # _entry.id 4R8L # _exptl.entry_id 4R8L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 133.103 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ASPARTIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4R8L _cell.length_a 123.21 _cell.length_b 156 _cell.length_c 158.82 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4R8L _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C4 H7 N O4' _chem_comp.formula_weight 133.103 _chem_comp.id ASP _chem_comp.mon_nstd_flag y _chem_comp.name 'ASPARTIC ACID' _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA ASP sing 55 n n N H ASP sing 56 n n N H2 ASP sing 57 n n CA C ASP sing 58 n n CA CB ASP sing 59 n n CA HA ASP sing 60 n n C O ASP doub 61 n n C OXT ASP sing 62 n n CB CG ASP sing 63 n n CB HB2 ASP sing 64 n n CB HB3 ASP sing 65 n n CG OD1 ASP doub 66 n n CG OD2 ASP sing 67 n n OD2 HD2 ASP sing 68 n n OXT HXT ASP sing 69 n n # _atom_sites.entry_id 4R8L _atom_sites.fract_transf_matrix[1][1] 0.008116 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00641 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006296 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ASP A 1 700 700 ASP ASP . F 2 ASP B 1 700 700 ASP ASP . G 2 ASP C 1 700 700 ASP ASP . H 2 ASP D 1 700 700 ASP ASP . I 3 HOH A 1 801 1 HOH HOH . I 3 HOH A 2 802 27 HOH HOH . I 3 HOH A 3 803 28 HOH HOH . I 3 HOH A 4 804 29 HOH HOH . I 3 HOH A 5 805 30 HOH HOH . I 3 HOH A 6 806 35 HOH HOH . I 3 HOH A 7 807 37 HOH HOH . I 3 HOH A 8 808 38 HOH HOH . I 3 HOH A 9 809 39 HOH HOH . I 3 HOH A 10 810 42 HOH HOH . I 3 HOH A 11 811 43 HOH HOH . I 3 HOH A 12 812 45 HOH HOH . I 3 HOH A 13 813 49 HOH HOH . I 3 HOH A 14 814 50 HOH HOH . I 3 HOH A 15 815 52 HOH HOH . I 3 HOH A 16 816 57 HOH HOH . I 3 HOH A 17 817 64 HOH HOH . I 3 HOH A 18 818 65 HOH HOH . I 3 HOH A 19 819 66 HOH HOH . I 3 HOH A 20 820 67 HOH HOH . I 3 HOH A 21 821 72 HOH HOH . I 3 HOH A 22 822 75 HOH HOH . I 3 HOH A 23 823 79 HOH HOH . I 3 HOH A 24 824 82 HOH HOH . I 3 HOH A 25 825 86 HOH HOH . I 3 HOH A 26 826 96 HOH HOH . I 3 HOH A 27 827 101 HOH HOH . I 3 HOH A 28 828 103 HOH HOH . I 3 HOH A 29 829 104 HOH HOH . I 3 HOH A 30 830 105 HOH HOH . I 3 HOH A 31 831 109 HOH HOH . I 3 HOH A 32 832 110 HOH HOH . I 3 HOH A 33 833 111 HOH HOH . I 3 HOH A 34 834 112 HOH HOH . I 3 HOH A 35 835 115 HOH HOH . I 3 HOH A 36 836 116 HOH HOH . I 3 HOH A 37 837 118 HOH HOH . I 3 HOH A 38 838 119 HOH HOH . I 3 HOH A 39 839 137 HOH HOH . I 3 HOH A 40 840 162 HOH HOH . I 3 HOH A 41 841 177 HOH HOH . I 3 HOH A 42 842 203 HOH HOH . I 3 HOH A 43 843 207 HOH HOH . I 3 HOH A 44 844 225 HOH HOH . I 3 HOH A 45 845 232 HOH HOH . I 3 HOH A 46 846 233 HOH HOH . I 3 HOH A 47 847 239 HOH HOH . I 3 HOH A 48 848 247 HOH HOH . J 3 HOH B 1 801 17 HOH HOH . J 3 HOH B 2 802 20 HOH HOH . J 3 HOH B 3 803 21 HOH HOH . J 3 HOH B 4 804 22 HOH HOH . J 3 HOH B 5 805 31 HOH HOH . J 3 HOH B 6 806 33 HOH HOH . J 3 HOH B 7 807 34 HOH HOH . J 3 HOH B 8 808 46 HOH HOH . J 3 HOH B 9 809 48 HOH HOH . J 3 HOH B 10 810 51 HOH HOH . J 3 HOH B 11 811 53 HOH HOH . J 3 HOH B 12 812 54 HOH HOH . J 3 HOH B 13 813 71 HOH HOH . J 3 HOH B 14 814 77 HOH HOH . J 3 HOH B 15 815 78 HOH HOH . J 3 HOH B 16 816 80 HOH HOH . J 3 HOH B 17 817 87 HOH HOH . J 3 HOH B 18 818 91 HOH HOH . J 3 HOH B 19 819 92 HOH HOH . J 3 HOH B 20 820 102 HOH HOH . J 3 HOH B 21 821 125 HOH HOH . J 3 HOH B 22 822 128 HOH HOH . J 3 HOH B 23 823 132 HOH HOH . J 3 HOH B 24 824 133 HOH HOH . J 3 HOH B 25 825 134 HOH HOH . J 3 HOH B 26 826 142 HOH HOH . J 3 HOH B 27 827 143 HOH HOH . J 3 HOH B 28 828 144 HOH HOH . J 3 HOH B 29 829 159 HOH HOH . J 3 HOH B 30 830 164 HOH HOH . J 3 HOH B 31 831 165 HOH HOH . J 3 HOH B 32 832 166 HOH HOH . J 3 HOH B 33 833 172 HOH HOH . J 3 HOH B 34 834 173 HOH HOH . J 3 HOH B 35 835 180 HOH HOH . J 3 HOH B 36 836 186 HOH HOH . J 3 HOH B 37 837 189 HOH HOH . J 3 HOH B 38 838 190 HOH HOH . J 3 HOH B 39 839 191 HOH HOH . J 3 HOH B 40 840 196 HOH HOH . J 3 HOH B 41 841 234 HOH HOH . J 3 HOH B 42 842 235 HOH HOH . J 3 HOH B 43 843 240 HOH HOH . J 3 HOH B 44 844 241 HOH HOH . J 3 HOH B 45 845 243 HOH HOH . J 3 HOH B 46 846 246 HOH HOH . J 3 HOH B 47 847 250 HOH HOH . J 3 HOH B 48 848 252 HOH HOH . K 3 HOH C 1 801 5 HOH HOH . K 3 HOH C 2 802 6 HOH HOH . K 3 HOH C 3 803 7 HOH HOH . K 3 HOH C 4 804 8 HOH HOH . K 3 HOH C 5 805 10 HOH HOH . K 3 HOH C 6 806 11 HOH HOH . K 3 HOH C 7 807 12 HOH HOH . K 3 HOH C 8 808 13 HOH HOH . K 3 HOH C 9 809 14 HOH HOH . K 3 HOH C 10 810 15 HOH HOH . K 3 HOH C 11 811 16 HOH HOH . K 3 HOH C 12 812 18 HOH HOH . K 3 HOH C 13 813 19 HOH HOH . K 3 HOH C 14 814 25 HOH HOH . K 3 HOH C 15 815 26 HOH HOH . K 3 HOH C 16 816 44 HOH HOH . K 3 HOH C 17 817 60 HOH HOH . K 3 HOH C 18 818 63 HOH HOH . K 3 HOH C 19 819 74 HOH HOH . K 3 HOH C 20 820 84 HOH HOH . K 3 HOH C 21 821 90 HOH HOH . K 3 HOH C 22 822 121 HOH HOH . K 3 HOH C 23 823 123 HOH HOH . K 3 HOH C 24 824 124 HOH HOH . K 3 HOH C 25 825 126 HOH HOH . K 3 HOH C 26 826 127 HOH HOH . K 3 HOH C 27 827 130 HOH HOH . K 3 HOH C 28 828 131 HOH HOH . K 3 HOH C 29 829 136 HOH HOH . K 3 HOH C 30 830 139 HOH HOH . K 3 HOH C 31 831 140 HOH HOH . K 3 HOH C 32 832 141 HOH HOH . K 3 HOH C 33 833 147 HOH HOH . K 3 HOH C 34 834 149 HOH HOH . K 3 HOH C 35 835 150 HOH HOH . K 3 HOH C 36 836 152 HOH HOH . K 3 HOH C 37 837 153 HOH HOH . K 3 HOH C 38 838 154 HOH HOH . K 3 HOH C 39 839 156 HOH HOH . K 3 HOH C 40 840 167 HOH HOH . K 3 HOH C 41 841 174 HOH HOH . K 3 HOH C 42 842 176 HOH HOH . K 3 HOH C 43 843 181 HOH HOH . K 3 HOH C 44 844 182 HOH HOH . K 3 HOH C 45 845 183 HOH HOH . K 3 HOH C 46 846 185 HOH HOH . K 3 HOH C 47 847 188 HOH HOH . K 3 HOH C 48 848 193 HOH HOH . K 3 HOH C 49 849 198 HOH HOH . K 3 HOH C 50 850 199 HOH HOH . K 3 HOH C 51 851 202 HOH HOH . K 3 HOH C 52 852 208 HOH HOH . K 3 HOH C 53 853 212 HOH HOH . K 3 HOH C 54 854 214 HOH HOH . K 3 HOH C 55 855 217 HOH HOH . K 3 HOH C 56 856 218 HOH HOH . K 3 HOH C 57 857 220 HOH HOH . K 3 HOH C 58 858 230 HOH HOH . K 3 HOH C 59 859 231 HOH HOH . K 3 HOH C 60 860 251 HOH HOH . L 3 HOH D 1 801 2 HOH HOH . L 3 HOH D 2 802 3 HOH HOH . L 3 HOH D 3 803 4 HOH HOH . L 3 HOH D 4 804 9 HOH HOH . L 3 HOH D 5 805 23 HOH HOH . L 3 HOH D 6 806 24 HOH HOH . L 3 HOH D 7 807 32 HOH HOH . L 3 HOH D 8 808 36 HOH HOH . L 3 HOH D 9 809 41 HOH HOH . L 3 HOH D 10 810 47 HOH HOH . L 3 HOH D 11 811 55 HOH HOH . L 3 HOH D 12 812 58 HOH HOH . L 3 HOH D 13 813 59 HOH HOH . L 3 HOH D 14 814 62 HOH HOH . L 3 HOH D 15 815 68 HOH HOH . L 3 HOH D 16 816 70 HOH HOH . L 3 HOH D 17 817 73 HOH HOH . L 3 HOH D 18 818 76 HOH HOH . L 3 HOH D 19 819 81 HOH HOH . L 3 HOH D 20 820 85 HOH HOH . L 3 HOH D 21 821 89 HOH HOH . L 3 HOH D 22 822 93 HOH HOH . L 3 HOH D 23 823 94 HOH HOH . L 3 HOH D 24 824 95 HOH HOH . L 3 HOH D 25 825 97 HOH HOH . L 3 HOH D 26 826 98 HOH HOH . L 3 HOH D 27 827 107 HOH HOH . L 3 HOH D 28 828 120 HOH HOH . L 3 HOH D 29 829 122 HOH HOH . L 3 HOH D 30 830 146 HOH HOH . L 3 HOH D 31 831 155 HOH HOH . L 3 HOH D 32 832 157 HOH HOH . L 3 HOH D 33 833 158 HOH HOH . L 3 HOH D 34 834 161 HOH HOH . L 3 HOH D 35 835 171 HOH HOH . L 3 HOH D 36 836 175 HOH HOH . L 3 HOH D 37 837 179 HOH HOH . L 3 HOH D 38 838 184 HOH HOH . L 3 HOH D 39 839 187 HOH HOH . L 3 HOH D 40 840 204 HOH HOH . L 3 HOH D 41 841 206 HOH HOH . L 3 HOH D 42 842 213 HOH HOH . L 3 HOH D 43 843 221 HOH HOH . L 3 HOH D 44 844 223 HOH HOH . L 3 HOH D 45 845 224 HOH HOH . L 3 HOH D 46 846 226 HOH HOH . L 3 HOH D 47 847 227 HOH HOH . L 3 HOH D 48 848 228 HOH HOH . L 3 HOH D 49 849 229 HOH HOH . L 3 HOH D 50 850 244 HOH HOH . L 3 HOH D 51 851 249 HOH HOH . L 3 HOH D 52 852 254 HOH HOH . L 3 HOH D 53 853 255 HOH HOH . L 3 HOH D 54 854 256 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N ASP . . . H 2 27.764 12.417 31.042 1 33.62 ? N ASP 700 D 1 HETATM 2 C CA ASP . . . H 2 26.829 12.625 32.135 1 34.07 ? CA ASP 700 D 1 HETATM 3 C C ASP . . . H 2 25.454 12.042 31.796 1 33.13 ? C ASP 700 D 1 HETATM 4 O O ASP . . . H 2 24.682 12.67 31.055 1 28.73 ? O ASP 700 D 1 HETATM 5 C CB ASP . . . H 2 26.723 14.123 32.426 1 36.94 ? CB ASP 700 D 1 HETATM 6 C CG ASP . . . H 2 25.975 14.433 33.736 1 37.93 ? CG ASP 700 D 1 HETATM 7 O OD1 ASP . . . H 2 25.162 13.585 34.197 1 35.33 ? OD1 ASP 700 D 1 HETATM 8 O OD2 ASP . . . H 2 26.22 15.541 34.287 1 36.24 ? OD2 ASP 700 D 1 HETATM 9 O OXT ASP . . . H 2 25.129 10.929 32.246 1 29.6 ? OXT ASP 700 D 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 41 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 9 #