data_4RB4 # _model_server_result.job_id eHB0IZhR7Ze4wytK8VhZHA _model_server_result.datetime_utc '2024-12-21 12:58:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rb4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":501}' # _entry.id 4RB4 # _exptl.entry_id 4RB4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.26 _cell.angle_gamma 90 _cell.entry_id 4RB4 _cell.length_a 88.292 _cell.length_b 313.196 _cell.length_c 164.695 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RB4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 M N N ? 2 O N N ? 2 Q N N ? 2 T N N ? 2 V N N ? 2 X N N ? 2 Z N N ? 2 BA N N ? 2 DA N N ? 2 FA N N ? 2 IA N N ? 2 LA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 342 K CYS 342 1_555 M FE FE . K FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc2 B SG CYS 339 L CYS 339 1_555 O FE FE . L FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc3 B SG CYS 358 L CYS 358 1_555 O FE FE . L FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc4 B SG CYS 370 L CYS 370 1_555 O FE FE . L FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.942 ? metalc ? metalc5 C SG CYS 339 C CYS 339 1_555 Q FE FE . C FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc6 C SG CYS 342 C CYS 342 1_555 Q FE FE . C FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? metalc ? metalc7 D SG CYS 339 D CYS 339 1_555 T FE FE . D FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.661 ? metalc ? metalc8 D SG CYS 358 D CYS 358 1_555 T FE FE . D FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc9 E SG CYS 358 E CYS 358 1_555 V FE FE . E FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? metalc ? metalc10 F SG CYS 339 H CYS 339 1_555 X FE FE . H FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc11 F SG CYS 342 H CYS 342 1_555 X FE FE . H FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.913 ? metalc ? metalc12 F SG CYS 358 H CYS 358 1_555 X FE FE . H FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc13 G SG CYS 339 B CYS 339 1_555 Z FE FE . B FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? metalc ? metalc14 G SG CYS 342 B CYS 342 1_555 Z FE FE . B FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc15 G SG CYS 358 B CYS 358 1_555 Z FE FE . B FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc16 H SG CYS 339 F CYS 339 1_555 BA FE FE . F FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc17 H SG CYS 342 F CYS 342 1_555 BA FE FE . F FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? metalc ? metalc18 H SG CYS 358 F CYS 358 1_555 BA FE FE . F FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc19 I SG CYS 342 G CYS 342 1_555 DA FE FE . G FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? metalc ? metalc20 J SG CYS 358 I CYS 358 1_555 FA FE FE . I FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc21 J SG CYS 370 I CYS 370 1_555 FA FE FE . I FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc22 K SG CYS 339 J CYS 339 1_555 IA FE FE . J FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? metalc ? metalc23 L SG CYS 339 A CYS 339 1_555 LA FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? metalc ? metalc24 L SG CYS 358 A CYS 358 1_555 LA FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4RB4 _atom_sites.fract_transf_matrix[1][1] 0.011326 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002255 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003193 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006191 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 FE K 1 501 1397 FE FE . N 3 AQH K 1 502 3001 AQH APH . O 2 FE L 1 501 1396 FE FE . P 3 AQH L 1 502 3002 AQH APH . Q 2 FE C 1 501 1399 FE FE . R 4 EDO C 1 502 1400 EDO EDO . S 3 AQH C 1 503 3001 AQH APH . T 2 FE D 1 501 1392 FE FE . U 3 AQH D 1 502 3001 AQH APH . V 2 FE E 1 501 1400 FE FE . W 3 AQH E 1 502 3001 AQH APH . X 2 FE H 1 501 1396 FE FE . Y 3 AQH H 1 502 3001 AQH APH . Z 2 FE B 1 501 1392 FE FE . AA 3 AQH B 1 502 3001 AQH APH . BA 2 FE F 1 501 1396 FE FE . CA 3 AQH F 1 502 3001 AQH APH . DA 2 FE G 1 501 1400 FE FE . EA 3 AQH G 1 502 3001 AQH APH . FA 2 FE I 1 501 1400 FE FE . GA 4 EDO I 1 502 1401 EDO EDO . HA 3 AQH I 1 503 3001 AQH APH . IA 2 FE J 1 501 1393 FE FE . JA 4 EDO J 1 502 1394 EDO EDO . KA 3 AQH J 1 503 3001 AQH APH . LA 2 FE A 1 501 1392 FE FE . MA 3 AQH A 1 502 3001 AQH APH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id T _atom_site.label_entity_id 2 _atom_site.Cartn_x 4.323 _atom_site.Cartn_y -11.934 _atom_site.Cartn_z 8.309 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 150 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 501 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 48 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #