data_4RBS
#
_model_server_result.job_id            c9gseWzmFvsEgGOI8yD06g 
_model_server_result.datetime_utc      '2024-11-25 18:42:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4rbs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":302}' 
#
_entry.id    4RBS 
#
_exptl.entry_id    4RBS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              399.462 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-2-[(1S,2R)-1-carboxy-2-hydroxypropyl]-4-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-3-methyl-2H-pyrro le-5-carboxylic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4RBS 
_cell.length_a            74.428 
_cell.length_b            74.428 
_cell.length_c            219.96 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4RBS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,P 1 1 
B,I,J,K,L,M,N,O,Q 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 93 A HIS 120 1_555 C ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? 
metalc ? metalc2 A ND1 HIS 95 A HIS 122 1_555 C ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? 
metalc ? metalc3 A OD2 ASP 97 A ASP 124 1_555 D ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? 
metalc ? metalc4 A NE2 HIS 162 A HIS 189 1_555 C ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
metalc ? metalc5 A SG CYS 181 A CYS 208 1_555 D ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? 
metalc ? metalc6 A NE2 HIS 223 A HIS 250 1_555 D ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? 
metalc ? metalc7 C ZN ZN . A ZN 300 1_555 E OAF 0RV . A 0RV 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? 
metalc ? metalc8 D ZN ZN . A ZN 301 1_555 E NAN 0RV . A 0RV 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? 
metalc ? metalc9 B NE2 HIS 93 B HIS 120 1_555 I ZN ZN . B ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? 
metalc ? metalc10 B ND1 HIS 95 B HIS 122 1_555 I ZN ZN . B ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? 
metalc ? metalc11 B OD2 ASP 97 B ASP 124 1_555 J ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? 
metalc ? metalc12 B NE2 HIS 162 B HIS 189 1_555 I ZN ZN . B ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? 
metalc ? metalc13 B SG CYS 181 B CYS 208 1_555 J ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? 
metalc ? metalc14 B NE2 HIS 223 B HIS 250 1_555 J ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? 
metalc ? metalc15 I ZN ZN . B ZN 300 1_555 K OAF 0RV . B 0RV 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? 
metalc ? metalc16 J ZN ZN . B ZN 301 1_555 K NAN 0RV . B 0RV 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? 
#
_chem_comp.formula           'C17 H25 N3 O6 S' 
_chem_comp.formula_weight    399.462 
_chem_comp.id                0RV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-2-[(1S,2R)-1-carboxy-2-hydroxypropyl]-4-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-3-methyl-2H-pyrro le-5-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'Meropenem, hydroxylated form' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAB CAV 0RV sing 1 n n 
CAA CAU 0RV sing 2 n n 
CAU OAJ 0RV sing 3 n n 
CAU CBA 0RV sing 4 n n 
CA CB 0RV sing 5 n n 
CA N 0RV sing 6 n n 
CA C 0RV sing 7 n n 
CB CG 0RV sing 8 n n 
CAZ CAV 0RV sing 9 n n 
CAZ CBA 0RV sing 10 n n 
CAZ NAN 0RV sing 11 n n 
CAV CAT 0RV doub 12 n n 
CG CD 0RV sing 13 n n 
CG SAO 0RV sing 14 n n 
N CD 0RV sing 15 n n 
C O 0RV doub 16 n n 
C NAY 0RV sing 17 n n 
CAD NAY 0RV sing 18 n n 
NAY CAC 0RV sing 19 n n 
CBA CAQ 0RV sing 20 n n 
NAN CAS 0RV doub 21 n n 
CAT SAO 0RV sing 22 n n 
CAT CAS 0RV sing 23 n n 
CAS CAP 0RV sing 24 n n 
CAQ OAF 0RV doub 25 n n 
CAQ OAI 0RV sing 26 n n 
CAP OAH 0RV doub 27 n n 
CAP OAE 0RV sing 28 n n 
CAC H1 0RV sing 29 n n 
CAC H2 0RV sing 30 n n 
CAC H3 0RV sing 31 n n 
CAD H4 0RV sing 32 n n 
CAD H5 0RV sing 33 n n 
CAD H6 0RV sing 34 n n 
CA H7 0RV sing 35 n n 
CB H8 0RV sing 36 n n 
CB H9 0RV sing 37 n n 
N H10 0RV sing 38 n n 
CD H12 0RV sing 39 n n 
CD H13 0RV sing 40 n n 
CG H14 0RV sing 41 n n 
CAB H15 0RV sing 42 n n 
CAB H16 0RV sing 43 n n 
CAB H17 0RV sing 44 n n 
OAE H18 0RV sing 45 n n 
CAZ H19 0RV sing 46 n n 
CBA H20 0RV sing 47 n n 
OAI H21 0RV sing 48 n n 
CAU H22 0RV sing 49 n n 
OAJ H23 0RV sing 50 n n 
CAA H24 0RV sing 51 n n 
CAA H25 0RV sing 52 n n 
CAA H26 0RV sing 53 n n 
#
_atom_sites.entry_id                     4RBS 
_atom_sites.fract_transf_matrix[1][1]    0.013436 
_atom_sites.fract_transf_matrix[1][2]    0.007757 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015514 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004546 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 300 300 ZN ZN . 
D 2 ZN A 1 301 301 ZN ZN . 
E 3 0RV A 1 302 302 0RV 0RV . 
F 4 ACY A 1 303 303 ACY ACY . 
G 5 GOL A 1 304 304 GOL GOL . 
H 5 GOL A 1 305 305 GOL GOL . 
I 2 ZN B 1 300 300 ZN ZN . 
J 2 ZN B 1 301 301 ZN ZN . 
K 3 0RV B 1 302 302 0RV 0RV . 
L 4 ACY B 1 303 303 ACY ACY . 
M 4 ACY B 1 304 304 ACY ACY . 
N 5 GOL B 1 305 305 GOL GOL . 
O 4 ACY B 1 306 306 ACY ACY . 
P 6 HOH A 1 401 1 HOH HOH . 
P 6 HOH A 2 402 4 HOH HOH . 
P 6 HOH A 3 403 7 HOH HOH . 
P 6 HOH A 4 404 9 HOH HOH . 
P 6 HOH A 5 405 10 HOH HOH . 
P 6 HOH A 6 406 12 HOH HOH . 
P 6 HOH A 7 407 13 HOH HOH . 
P 6 HOH A 8 408 14 HOH HOH . 
P 6 HOH A 9 409 15 HOH HOH . 
P 6 HOH A 10 410 16 HOH HOH . 
P 6 HOH A 11 411 17 HOH HOH . 
P 6 HOH A 12 412 19 HOH HOH . 
P 6 HOH A 13 413 20 HOH HOH . 
P 6 HOH A 14 414 24 HOH HOH . 
P 6 HOH A 15 415 30 HOH HOH . 
P 6 HOH A 16 416 33 HOH HOH . 
P 6 HOH A 17 417 34 HOH HOH . 
P 6 HOH A 18 418 35 HOH HOH . 
P 6 HOH A 19 419 36 HOH HOH . 
P 6 HOH A 20 420 37 HOH HOH . 
P 6 HOH A 21 421 38 HOH HOH . 
P 6 HOH A 22 422 39 HOH HOH . 
P 6 HOH A 23 423 41 HOH HOH . 
P 6 HOH A 24 424 43 HOH HOH . 
P 6 HOH A 25 425 44 HOH HOH . 
P 6 HOH A 26 426 45 HOH HOH . 
P 6 HOH A 27 427 46 HOH HOH . 
P 6 HOH A 28 428 49 HOH HOH . 
P 6 HOH A 29 429 52 HOH HOH . 
P 6 HOH A 30 430 53 HOH HOH . 
P 6 HOH A 31 431 55 HOH HOH . 
P 6 HOH A 32 432 60 HOH HOH . 
P 6 HOH A 33 433 61 HOH HOH . 
P 6 HOH A 34 434 62 HOH HOH . 
P 6 HOH A 35 435 66 HOH HOH . 
P 6 HOH A 36 436 67 HOH HOH . 
P 6 HOH A 37 437 68 HOH HOH . 
P 6 HOH A 38 438 69 HOH HOH . 
P 6 HOH A 39 439 70 HOH HOH . 
P 6 HOH A 40 440 72 HOH HOH . 
P 6 HOH A 41 441 73 HOH HOH . 
P 6 HOH A 42 442 74 HOH HOH . 
P 6 HOH A 43 443 79 HOH HOH . 
P 6 HOH A 44 444 81 HOH HOH . 
P 6 HOH A 45 445 82 HOH HOH . 
P 6 HOH A 46 446 83 HOH HOH . 
P 6 HOH A 47 447 87 HOH HOH . 
P 6 HOH A 48 448 88 HOH HOH . 
P 6 HOH A 49 449 89 HOH HOH . 
P 6 HOH A 50 450 90 HOH HOH . 
P 6 HOH A 51 451 93 HOH HOH . 
Q 6 HOH B 1 401 2 HOH HOH . 
Q 6 HOH B 2 402 3 HOH HOH . 
Q 6 HOH B 3 403 5 HOH HOH . 
Q 6 HOH B 4 404 6 HOH HOH . 
Q 6 HOH B 5 405 8 HOH HOH . 
Q 6 HOH B 6 406 11 HOH HOH . 
Q 6 HOH B 7 407 18 HOH HOH . 
Q 6 HOH B 8 408 21 HOH HOH . 
Q 6 HOH B 9 409 22 HOH HOH . 
Q 6 HOH B 10 410 23 HOH HOH . 
Q 6 HOH B 11 411 25 HOH HOH . 
Q 6 HOH B 12 412 26 HOH HOH . 
Q 6 HOH B 13 413 27 HOH HOH . 
Q 6 HOH B 14 414 28 HOH HOH . 
Q 6 HOH B 15 415 29 HOH HOH . 
Q 6 HOH B 16 416 31 HOH HOH . 
Q 6 HOH B 17 417 32 HOH HOH . 
Q 6 HOH B 18 418 40 HOH HOH . 
Q 6 HOH B 19 419 42 HOH HOH . 
Q 6 HOH B 20 420 47 HOH HOH . 
Q 6 HOH B 21 421 48 HOH HOH . 
Q 6 HOH B 22 422 50 HOH HOH . 
Q 6 HOH B 23 423 51 HOH HOH . 
Q 6 HOH B 24 424 54 HOH HOH . 
Q 6 HOH B 25 425 56 HOH HOH . 
Q 6 HOH B 26 426 57 HOH HOH . 
Q 6 HOH B 27 427 58 HOH HOH . 
Q 6 HOH B 28 428 59 HOH HOH . 
Q 6 HOH B 29 429 63 HOH HOH . 
Q 6 HOH B 30 430 64 HOH HOH . 
Q 6 HOH B 31 431 65 HOH HOH . 
Q 6 HOH B 32 432 71 HOH HOH . 
Q 6 HOH B 33 433 75 HOH HOH . 
Q 6 HOH B 34 434 76 HOH HOH . 
Q 6 HOH B 35 435 77 HOH HOH . 
Q 6 HOH B 36 436 78 HOH HOH . 
Q 6 HOH B 37 437 80 HOH HOH . 
Q 6 HOH B 38 438 84 HOH HOH . 
Q 6 HOH B 39 439 85 HOH HOH . 
Q 6 HOH B 40 440 86 HOH HOH . 
Q 6 HOH B 41 441 91 HOH HOH . 
Q 6 HOH B 42 442 92 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O 0RV . . . E 3 -36.576 12.113 4.595 1 101.92 ? O 0RV 302 A 1 
HETATM 2 C C 0RV . . . E 3 -36.809 12.729 5.622 1 101.83 ? C 0RV 302 A 1 
HETATM 3 N NAY 0RV . . . E 3 -37.61 13.79 5.673 1 103.45 ? NAY 0RV 302 A 1 
HETATM 4 C CAC 0RV . . . E 3 -37.115 15.152 5.544 1 99.53 ? CAC 0RV 302 A 1 
HETATM 5 C CAD 0RV . . . E 3 -39.047 13.665 5.865 1 99.76 ? CAD 0RV 302 A 1 
HETATM 6 C CA 0RV . . . E 3 -36.206 12.296 6.922 1 92.63 ? CA 0RV 302 A 1 
HETATM 7 C CB 0RV . . . E 3 -35.025 11.367 6.658 1 89.16 ? CB 0RV 302 A 1 
HETATM 8 N N 0RV . . . E 3 -37.21 11.52 7.679 1 84.61 ? N 0RV 302 A 1 
HETATM 9 C CD 0RV . . . E 3 -36.867 10.099 7.511 1 81.75 ? CD 0RV 302 A 1 
HETATM 10 C CG 0RV . . . E 3 -35.351 10.089 7.412 1 84.15 ? CG 0RV 302 A 1 
HETATM 11 S SAO 0RV . . . E 3 -34.754 8.651 6.582 1 73.18 ? SAO 0RV 302 A 1 
HETATM 12 C CAT 0RV . . . E 3 -33.905 7.773 7.718 1 86.66 ? CAT 0RV 302 A 1 
HETATM 13 C CAV 0RV . . . E 3 -32.41 7.837 7.817 1 78.42 ? CAV 0RV 302 A 1 
HETATM 14 C CAB 0RV . . . E 3 -31.76 7.669 6.451 1 68.97 ? CAB 0RV 302 A 1 
HETATM 15 C CAS 0RV . . . E 3 -34.407 6.98 8.666 1 84.71 ? CAS 0RV 302 A 1 
HETATM 16 C CAP 0RV . . . E 3 -35.687 6.672 8.909 1 83.19 ? CAP 0RV 302 A 1 
HETATM 17 O OAE 0RV . . . E 3 -36.629 7.124 8.226 1 84.58 ? OAE 0RV 302 A 1 
HETATM 18 O OAH 0RV . . . E 3 -35.925 5.903 9.862 1 90.36 ? OAH 0RV 302 A 1 
HETATM 19 N NAN 0RV . . . E 3 -33.423 6.478 9.404 1 82.66 ? NAN 0RV 302 A 1 
HETATM 20 C CAZ 0RV . . . E 3 -32.11 6.739 8.842 1 79.11 ? CAZ 0RV 302 A 1 
HETATM 21 C CBA 0RV . . . E 3 -31.584 5.425 8.274 1 75.56 ? CBA 0RV 302 A 1 
HETATM 22 C CAQ 0RV . . . E 3 -32.424 4.332 8.857 1 74.1 ? CAQ 0RV 302 A 1 
HETATM 23 O OAF 0RV . . . E 3 -32.507 4.269 10.102 1 75.98 ? OAF 0RV 302 A 1 
HETATM 24 O OAI 0RV . . . E 3 -33.003 3.53 8.095 1 71.34 ? OAI 0RV 302 A 1 
HETATM 25 C CAU 0RV . . . E 3 -30.144 5.109 8.674 1 75.61 ? CAU 0RV 302 A 1 
HETATM 26 O OAJ 0RV . . . E 3 -30.025 5.186 10.1 1 78.95 ? OAJ 0RV 302 A 1 
HETATM 27 C CAA 0RV . . . E 3 -29.115 6.027 8.026 1 76.03 ? CAA 0RV 302 A 1 
#
_model_server_stats.io_time_ms              24 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           329 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           27 
#