data_4RCP # _model_server_result.job_id F6lDWSO4wH2lqUuh4fM7Cw _model_server_result.datetime_utc '2025-03-23 22:12:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rcp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 4RCP # _exptl.entry_id 4RCP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.27 _cell.angle_gamma 90 _cell.entry_id 4RCP _cell.length_a 39.39 _cell.length_b 61.27 _cell.length_c 51.26 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RCP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ACE 1 B ACE 1 1_555 B N 56A 2 B 56A 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 sing covale ? covale2 B C 56A 2 B 56A 2 1_555 B N SER 3 B SER 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 sing covale ? covale3 B C SER 3 B SER 3 1_555 B N TPO 4 B TPO 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 sing covale ? covale4 B C TPO 4 B TPO 4 1_555 B N NH2 5 B NH2 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 sing # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 144 n n C1 C2 EDO sing 145 n n C1 H11 EDO sing 146 n n C1 H12 EDO sing 147 n n O1 HO1 EDO sing 148 n n C2 O2 EDO sing 149 n n C2 H21 EDO sing 150 n n C2 H22 EDO sing 151 n n O2 HO2 EDO sing 152 n n # _atom_sites.entry_id 4RCP _atom_sites.fract_transf_matrix[1][1] 0.025387 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005987 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016321 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020044 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO A 1 601 1 EDO EDO . D 3 EDO A 1 602 2 EDO EDO . E 3 EDO A 1 603 3 EDO EDO . F 3 EDO A 1 604 4 EDO EDO . G 3 EDO A 1 605 5 EDO EDO . H 3 EDO A 1 606 6 EDO EDO . I 3 EDO A 1 607 7 EDO EDO . J 3 EDO A 1 608 8 EDO EDO . K 3 EDO A 1 609 9 EDO EDO . L 3 EDO A 1 610 10 EDO EDO . M 4 HOH A 1 701 206 HOH HOH . M 4 HOH A 2 702 207 HOH HOH . M 4 HOH A 3 703 208 HOH HOH . M 4 HOH A 4 704 209 HOH HOH . M 4 HOH A 5 705 210 HOH HOH . M 4 HOH A 6 706 211 HOH HOH . M 4 HOH A 7 707 13 HOH HOH . M 4 HOH A 8 708 14 HOH HOH . M 4 HOH A 9 709 16 HOH HOH . M 4 HOH A 10 710 17 HOH HOH . M 4 HOH A 11 711 18 HOH HOH . M 4 HOH A 12 712 19 HOH HOH . M 4 HOH A 13 713 20 HOH HOH . M 4 HOH A 14 714 21 HOH HOH . M 4 HOH A 15 715 22 HOH HOH . M 4 HOH A 16 716 24 HOH HOH . M 4 HOH A 17 717 25 HOH HOH . M 4 HOH A 18 718 26 HOH HOH . M 4 HOH A 19 719 27 HOH HOH . M 4 HOH A 20 720 28 HOH HOH . M 4 HOH A 21 721 29 HOH HOH . M 4 HOH A 22 722 30 HOH HOH . M 4 HOH A 23 723 31 HOH HOH . M 4 HOH A 24 724 32 HOH HOH . M 4 HOH A 25 725 33 HOH HOH . M 4 HOH A 26 726 34 HOH HOH . M 4 HOH A 27 727 35 HOH HOH . M 4 HOH A 28 728 36 HOH HOH . M 4 HOH A 29 729 37 HOH HOH . M 4 HOH A 30 730 38 HOH HOH . M 4 HOH A 31 731 39 HOH HOH . M 4 HOH A 32 732 40 HOH HOH . M 4 HOH A 33 733 41 HOH HOH . M 4 HOH A 34 734 42 HOH HOH . M 4 HOH A 35 735 43 HOH HOH . M 4 HOH A 36 736 44 HOH HOH . M 4 HOH A 37 737 45 HOH HOH . M 4 HOH A 38 738 46 HOH HOH . M 4 HOH A 39 739 48 HOH HOH . M 4 HOH A 40 740 49 HOH HOH . M 4 HOH A 41 741 50 HOH HOH . M 4 HOH A 42 742 51 HOH HOH . M 4 HOH A 43 743 52 HOH HOH . M 4 HOH A 44 744 53 HOH HOH . M 4 HOH A 45 745 54 HOH HOH . M 4 HOH A 46 746 55 HOH HOH . M 4 HOH A 47 747 56 HOH HOH . M 4 HOH A 48 748 57 HOH HOH . M 4 HOH A 49 749 59 HOH HOH . M 4 HOH A 50 750 60 HOH HOH . M 4 HOH A 51 751 61 HOH HOH . M 4 HOH A 52 752 65 HOH HOH . M 4 HOH A 53 753 66 HOH HOH . M 4 HOH A 54 754 67 HOH HOH . M 4 HOH A 55 755 68 HOH HOH . M 4 HOH A 56 756 69 HOH HOH . M 4 HOH A 57 757 70 HOH HOH . M 4 HOH A 58 758 71 HOH HOH . M 4 HOH A 59 759 72 HOH HOH . M 4 HOH A 60 760 74 HOH HOH . M 4 HOH A 61 761 75 HOH HOH . M 4 HOH A 62 762 76 HOH HOH . M 4 HOH A 63 763 77 HOH HOH . M 4 HOH A 64 764 78 HOH HOH . M 4 HOH A 65 765 79 HOH HOH . M 4 HOH A 66 766 80 HOH HOH . M 4 HOH A 67 767 81 HOH HOH . M 4 HOH A 68 768 82 HOH HOH . M 4 HOH A 69 769 83 HOH HOH . M 4 HOH A 70 770 84 HOH HOH . M 4 HOH A 71 771 86 HOH HOH . M 4 HOH A 72 772 87 HOH HOH . M 4 HOH A 73 773 89 HOH HOH . M 4 HOH A 74 774 90 HOH HOH . M 4 HOH A 75 775 91 HOH HOH . M 4 HOH A 76 776 92 HOH HOH . M 4 HOH A 77 777 94 HOH HOH . M 4 HOH A 78 778 95 HOH HOH . M 4 HOH A 79 779 96 HOH HOH . M 4 HOH A 80 780 97 HOH HOH . M 4 HOH A 81 781 98 HOH HOH . M 4 HOH A 82 782 99 HOH HOH . M 4 HOH A 83 783 100 HOH HOH . M 4 HOH A 84 784 101 HOH HOH . M 4 HOH A 85 785 102 HOH HOH . M 4 HOH A 86 786 103 HOH HOH . M 4 HOH A 87 787 104 HOH HOH . M 4 HOH A 88 788 105 HOH HOH . M 4 HOH A 89 789 106 HOH HOH . M 4 HOH A 90 790 107 HOH HOH . M 4 HOH A 91 791 108 HOH HOH . M 4 HOH A 92 792 109 HOH HOH . M 4 HOH A 93 793 110 HOH HOH . M 4 HOH A 94 794 111 HOH HOH . M 4 HOH A 95 795 112 HOH HOH . M 4 HOH A 96 796 113 HOH HOH . M 4 HOH A 97 797 114 HOH HOH . M 4 HOH A 98 798 115 HOH HOH . M 4 HOH A 99 799 116 HOH HOH . M 4 HOH A 100 800 117 HOH HOH . M 4 HOH A 101 801 118 HOH HOH . M 4 HOH A 102 802 119 HOH HOH . M 4 HOH A 103 803 120 HOH HOH . M 4 HOH A 104 804 121 HOH HOH . M 4 HOH A 105 805 122 HOH HOH . M 4 HOH A 106 806 123 HOH HOH . M 4 HOH A 107 807 124 HOH HOH . M 4 HOH A 108 808 125 HOH HOH . M 4 HOH A 109 809 126 HOH HOH . M 4 HOH A 110 810 127 HOH HOH . M 4 HOH A 111 811 128 HOH HOH . M 4 HOH A 112 812 129 HOH HOH . M 4 HOH A 113 813 130 HOH HOH . M 4 HOH A 114 814 131 HOH HOH . M 4 HOH A 115 815 132 HOH HOH . M 4 HOH A 116 816 133 HOH HOH . M 4 HOH A 117 817 134 HOH HOH . M 4 HOH A 118 818 135 HOH HOH . M 4 HOH A 119 819 136 HOH HOH . M 4 HOH A 120 820 137 HOH HOH . M 4 HOH A 121 821 138 HOH HOH . M 4 HOH A 122 822 139 HOH HOH . M 4 HOH A 123 823 140 HOH HOH . M 4 HOH A 124 824 141 HOH HOH . M 4 HOH A 125 825 142 HOH HOH . M 4 HOH A 126 826 143 HOH HOH . M 4 HOH A 127 827 144 HOH HOH . M 4 HOH A 128 828 145 HOH HOH . M 4 HOH A 129 829 146 HOH HOH . M 4 HOH A 130 830 147 HOH HOH . M 4 HOH A 131 831 148 HOH HOH . M 4 HOH A 132 832 149 HOH HOH . M 4 HOH A 133 833 150 HOH HOH . M 4 HOH A 134 834 151 HOH HOH . M 4 HOH A 135 835 152 HOH HOH . M 4 HOH A 136 836 153 HOH HOH . M 4 HOH A 137 837 154 HOH HOH . M 4 HOH A 138 838 155 HOH HOH . M 4 HOH A 139 839 156 HOH HOH . M 4 HOH A 140 840 157 HOH HOH . M 4 HOH A 141 841 158 HOH HOH . M 4 HOH A 142 842 159 HOH HOH . M 4 HOH A 143 843 160 HOH HOH . M 4 HOH A 144 844 162 HOH HOH . M 4 HOH A 145 845 163 HOH HOH . M 4 HOH A 146 846 164 HOH HOH . M 4 HOH A 147 847 165 HOH HOH . M 4 HOH A 148 848 166 HOH HOH . M 4 HOH A 149 849 167 HOH HOH . M 4 HOH A 150 850 169 HOH HOH . M 4 HOH A 151 851 170 HOH HOH . M 4 HOH A 152 852 171 HOH HOH . M 4 HOH A 153 853 172 HOH HOH . N 4 HOH B 1 201 212 HOH HOH . N 4 HOH B 2 202 15 HOH HOH . N 4 HOH B 3 203 23 HOH HOH . N 4 HOH B 4 204 58 HOH HOH . N 4 HOH B 5 205 62 HOH HOH . N 4 HOH B 6 206 64 HOH HOH . N 4 HOH B 7 207 73 HOH HOH . N 4 HOH B 8 208 85 HOH HOH . N 4 HOH B 9 209 88 HOH HOH . N 4 HOH B 10 210 161 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 5.027 -6.699 -7.853 1 26.76 ? C1 EDO 602 A 1 HETATM 2 O O1 EDO . . . D 3 4.712 -7.293 -6.602 1 24.87 ? O1 EDO 602 A 1 HETATM 3 C C2 EDO . . . D 3 3.844 -6.829 -8.831 1 26.67 ? C2 EDO 602 A 1 HETATM 4 O O2 EDO . . . D 3 2.723 -6.167 -8.285 1 27.08 ? O2 EDO 602 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 223 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #