data_4RCV
#
_model_server_result.job_id            S7fq4YWdiZtpjnWTQOXxXw 
_model_server_result.datetime_utc      '2024-11-25 15:27:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4rcv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":402}' 
#
_entry.id    4RCV 
#
_exptl.entry_id    4RCV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          101.73 
_cell.angle_gamma         90 
_cell.entry_id            4RCV 
_cell.length_a            67.37 
_cell.length_b            64.378 
_cell.length_c            85.741 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4RCV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 166 A ASP 151 1_555 C MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? 
metalc ? metalc2 A OE2 GLU 168 A GLU 153 1_555 C MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? 
metalc ? metalc3 A OE2 GLU 237 A GLU 222 1_555 C MN MN . A MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? 
metalc ? metalc4 C MN MN . A MN 401 1_555 E O5 DE2 . A DE2 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? 
metalc ? metalc5 C MN MN . A MN 401 1_555 E O3 DE2 . A DE2 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? 
metalc ? metalc6 C MN MN . A MN 401 1_555 E O2 DE2 . A DE2 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? 
metalc ? metalc7 B OD1 ASP 166 B ASP 151 1_555 G MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? 
metalc ? metalc8 B OE2 GLU 168 B GLU 153 1_555 G MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? 
metalc ? metalc9 B OE2 GLU 237 B GLU 222 1_555 G MN MN . B MN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                NDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NDP doub 251 n n 
PA O2A NDP sing 252 n n 
PA O5B NDP sing 253 n n 
PA O3 NDP sing 254 n n 
O2A HOA2 NDP sing 255 n n 
O5B C5B NDP sing 256 n n 
C5B C4B NDP sing 257 n n 
C5B H51A NDP sing 258 n n 
C5B H52A NDP sing 259 n n 
C4B O4B NDP sing 260 n n 
C4B C3B NDP sing 261 n n 
C4B H4B NDP sing 262 n n 
O4B C1B NDP sing 263 n n 
C3B O3B NDP sing 264 n n 
C3B C2B NDP sing 265 n n 
C3B H3B NDP sing 266 n n 
O3B HO3A NDP sing 267 n n 
C2B O2B NDP sing 268 n n 
C2B C1B NDP sing 269 n n 
C2B H2B NDP sing 270 n n 
O2B P2B NDP sing 271 n n 
C1B N9A NDP sing 272 n n 
C1B H1B NDP sing 273 n n 
N9A C8A NDP sing 274 n y 
N9A C4A NDP sing 275 n y 
C8A N7A NDP doub 276 n y 
C8A H8A NDP sing 277 n n 
N7A C5A NDP sing 278 n y 
C5A C6A NDP sing 279 n y 
C5A C4A NDP doub 280 n y 
C6A N6A NDP sing 281 n n 
C6A N1A NDP doub 282 n y 
N6A H61A NDP sing 283 n n 
N6A H62A NDP sing 284 n n 
N1A C2A NDP sing 285 n y 
C2A N3A NDP doub 286 n y 
C2A H2A NDP sing 287 n n 
N3A C4A NDP sing 288 n y 
O3 PN NDP sing 289 n n 
PN O1N NDP doub 290 n n 
PN O2N NDP sing 291 n n 
PN O5D NDP sing 292 n n 
O2N H21N NDP sing 293 n n 
O5D C5D NDP sing 294 n n 
C5D C4D NDP sing 295 n n 
C5D H51N NDP sing 296 n n 
C5D H52N NDP sing 297 n n 
C4D O4D NDP sing 298 n n 
C4D C3D NDP sing 299 n n 
C4D H4D NDP sing 300 n n 
O4D C1D NDP sing 301 n n 
C3D O3D NDP sing 302 n n 
C3D C2D NDP sing 303 n n 
C3D H3D NDP sing 304 n n 
O3D HO3N NDP sing 305 n n 
C2D O2D NDP sing 306 n n 
C2D C1D NDP sing 307 n n 
C2D H2D NDP sing 308 n n 
O2D HO2N NDP sing 309 n n 
C1D N1N NDP sing 310 n n 
C1D H1D NDP sing 311 n n 
N1N C2N NDP sing 312 n n 
N1N C6N NDP sing 313 n n 
C2N C3N NDP doub 314 n n 
C2N H2N NDP sing 315 n n 
C3N C7N NDP sing 316 n n 
C3N C4N NDP sing 317 n n 
C7N O7N NDP doub 318 n n 
C7N N7N NDP sing 319 n n 
N7N H71N NDP sing 320 n n 
N7N H72N NDP sing 321 n n 
C4N C5N NDP sing 322 n n 
C4N H41N NDP sing 323 n n 
C4N H42N NDP sing 324 n n 
C5N C6N NDP doub 325 n n 
C5N H5N NDP sing 326 n n 
C6N H6N NDP sing 327 n n 
P2B O1X NDP doub 328 n n 
P2B O2X NDP sing 329 n n 
P2B O3X NDP sing 330 n n 
O2X HOP2 NDP sing 331 n n 
O3X HOP3 NDP sing 332 n n 
#
_atom_sites.entry_id                     4RCV 
_atom_sites.fract_transf_matrix[1][1]    0.014843 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003082 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015533 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011912 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MN A 1 401 1 MN MN . 
D 3 NDP A 1 402 1 NDP NDP . 
E 4 DE2 A 1 403 1 DE2 DE2 . 
F 5 PO3 A 1 404 1 PO3 PO3 . 
G 2 MN B 1 401 2 MN MN . 
H 3 NDP B 1 402 2 NDP NDP . 
I 5 PO3 B 1 403 2 PO3 PO3 . 
J 6 HOH A 1 501 1 HOH HOH . 
J 6 HOH A 2 502 2 HOH HOH . 
J 6 HOH A 3 503 3 HOH HOH . 
J 6 HOH A 4 504 4 HOH HOH . 
J 6 HOH A 5 505 5 HOH HOH . 
J 6 HOH A 6 506 6 HOH HOH . 
J 6 HOH A 7 507 7 HOH HOH . 
J 6 HOH A 8 508 8 HOH HOH . 
J 6 HOH A 9 509 9 HOH HOH . 
J 6 HOH A 10 510 10 HOH HOH . 
J 6 HOH A 11 511 11 HOH HOH . 
J 6 HOH A 12 512 12 HOH HOH . 
J 6 HOH A 13 513 13 HOH HOH . 
J 6 HOH A 14 514 14 HOH HOH . 
J 6 HOH A 15 515 15 HOH HOH . 
J 6 HOH A 16 516 16 HOH HOH . 
J 6 HOH A 17 517 17 HOH HOH . 
J 6 HOH A 18 518 18 HOH HOH . 
J 6 HOH A 19 519 19 HOH HOH . 
J 6 HOH A 20 520 20 HOH HOH . 
J 6 HOH A 21 521 21 HOH HOH . 
J 6 HOH A 22 522 22 HOH HOH . 
J 6 HOH A 23 523 23 HOH HOH . 
J 6 HOH A 24 524 24 HOH HOH . 
J 6 HOH A 25 525 25 HOH HOH . 
J 6 HOH A 26 526 26 HOH HOH . 
J 6 HOH A 27 527 27 HOH HOH . 
J 6 HOH A 28 528 28 HOH HOH . 
J 6 HOH A 29 529 29 HOH HOH . 
J 6 HOH A 30 530 30 HOH HOH . 
J 6 HOH A 31 531 31 HOH HOH . 
J 6 HOH A 32 532 32 HOH HOH . 
J 6 HOH A 33 533 33 HOH HOH . 
J 6 HOH A 34 534 34 HOH HOH . 
J 6 HOH A 35 535 35 HOH HOH . 
J 6 HOH A 36 536 36 HOH HOH . 
J 6 HOH A 37 537 37 HOH HOH . 
J 6 HOH A 38 538 38 HOH HOH . 
J 6 HOH A 39 539 39 HOH HOH . 
J 6 HOH A 40 540 40 HOH HOH . 
J 6 HOH A 41 541 41 HOH HOH . 
J 6 HOH A 42 542 42 HOH HOH . 
J 6 HOH A 43 543 43 HOH HOH . 
J 6 HOH A 44 544 44 HOH HOH . 
J 6 HOH A 45 545 45 HOH HOH . 
J 6 HOH A 46 546 46 HOH HOH . 
J 6 HOH A 47 547 47 HOH HOH . 
J 6 HOH A 48 548 48 HOH HOH . 
J 6 HOH A 49 549 49 HOH HOH . 
J 6 HOH A 50 550 52 HOH HOH . 
J 6 HOH A 51 551 55 HOH HOH . 
J 6 HOH A 52 552 56 HOH HOH . 
J 6 HOH A 53 553 57 HOH HOH . 
J 6 HOH A 54 554 59 HOH HOH . 
J 6 HOH A 55 555 60 HOH HOH . 
J 6 HOH A 56 556 62 HOH HOH . 
J 6 HOH A 57 557 63 HOH HOH . 
J 6 HOH A 58 558 64 HOH HOH . 
J 6 HOH A 59 559 65 HOH HOH . 
J 6 HOH A 60 560 66 HOH HOH . 
J 6 HOH A 61 561 67 HOH HOH . 
J 6 HOH A 62 562 98 HOH HOH . 
J 6 HOH A 63 563 99 HOH HOH . 
J 6 HOH A 64 564 100 HOH HOH . 
J 6 HOH A 65 565 101 HOH HOH . 
J 6 HOH A 66 566 103 HOH HOH . 
J 6 HOH A 67 567 104 HOH HOH . 
J 6 HOH A 68 568 105 HOH HOH . 
J 6 HOH A 69 569 106 HOH HOH . 
J 6 HOH A 70 570 108 HOH HOH . 
J 6 HOH A 71 571 109 HOH HOH . 
J 6 HOH A 72 572 110 HOH HOH . 
J 6 HOH A 73 573 123 HOH HOH . 
J 6 HOH A 74 574 124 HOH HOH . 
J 6 HOH A 75 575 125 HOH HOH . 
J 6 HOH A 76 576 126 HOH HOH . 
J 6 HOH A 77 577 127 HOH HOH . 
J 6 HOH A 78 578 129 HOH HOH . 
J 6 HOH A 79 579 130 HOH HOH . 
J 6 HOH A 80 580 131 HOH HOH . 
K 6 HOH B 1 501 50 HOH HOH . 
K 6 HOH B 2 502 51 HOH HOH . 
K 6 HOH B 3 503 53 HOH HOH . 
K 6 HOH B 4 504 54 HOH HOH . 
K 6 HOH B 5 505 58 HOH HOH . 
K 6 HOH B 6 506 61 HOH HOH . 
K 6 HOH B 7 507 68 HOH HOH . 
K 6 HOH B 8 508 69 HOH HOH . 
K 6 HOH B 9 509 70 HOH HOH . 
K 6 HOH B 10 510 71 HOH HOH . 
K 6 HOH B 11 511 72 HOH HOH . 
K 6 HOH B 12 512 73 HOH HOH . 
K 6 HOH B 13 513 74 HOH HOH . 
K 6 HOH B 14 514 75 HOH HOH . 
K 6 HOH B 15 515 76 HOH HOH . 
K 6 HOH B 16 516 77 HOH HOH . 
K 6 HOH B 17 517 78 HOH HOH . 
K 6 HOH B 18 518 79 HOH HOH . 
K 6 HOH B 19 519 80 HOH HOH . 
K 6 HOH B 20 520 81 HOH HOH . 
K 6 HOH B 21 521 82 HOH HOH . 
K 6 HOH B 22 522 83 HOH HOH . 
K 6 HOH B 23 523 84 HOH HOH . 
K 6 HOH B 24 524 85 HOH HOH . 
K 6 HOH B 25 525 86 HOH HOH . 
K 6 HOH B 26 526 87 HOH HOH . 
K 6 HOH B 27 527 88 HOH HOH . 
K 6 HOH B 28 528 89 HOH HOH . 
K 6 HOH B 29 529 90 HOH HOH . 
K 6 HOH B 30 530 91 HOH HOH . 
K 6 HOH B 31 531 92 HOH HOH . 
K 6 HOH B 32 532 93 HOH HOH . 
K 6 HOH B 33 533 94 HOH HOH . 
K 6 HOH B 34 534 95 HOH HOH . 
K 6 HOH B 35 535 96 HOH HOH . 
K 6 HOH B 36 536 97 HOH HOH . 
K 6 HOH B 37 537 107 HOH HOH . 
K 6 HOH B 38 538 111 HOH HOH . 
K 6 HOH B 39 539 112 HOH HOH . 
K 6 HOH B 40 540 113 HOH HOH . 
K 6 HOH B 41 541 114 HOH HOH . 
K 6 HOH B 42 542 115 HOH HOH . 
K 6 HOH B 43 543 116 HOH HOH . 
K 6 HOH B 44 544 117 HOH HOH . 
K 6 HOH B 45 545 118 HOH HOH . 
K 6 HOH B 46 546 119 HOH HOH . 
K 6 HOH B 47 547 120 HOH HOH . 
K 6 HOH B 48 548 121 HOH HOH . 
K 6 HOH B 49 549 122 HOH HOH . 
K 6 HOH B 50 550 128 HOH HOH . 
K 6 HOH B 51 551 132 HOH HOH . 
K 6 HOH B 52 552 133 HOH HOH . 
K 6 HOH B 53 553 134 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NDP . . . H 3 69.725 -9.71 131.85 1 56.28 ? PA NDP 402 B 1 
HETATM 2 O O1A NDP . . . H 3 70.303 -10.685 130.838 1 43.51 -1 O1A NDP 402 B 1 
HETATM 3 O O2A NDP . . . H 3 68.562 -10.141 132.717 1 53.11 ? O2A NDP 402 B 1 
HETATM 4 O O5B NDP . . . H 3 70.894 -9.156 132.833 1 47.56 ? O5B NDP 402 B 1 
HETATM 5 C C5B NDP . . . H 3 70.713 -7.932 133.561 1 39.01 ? C5B NDP 402 B 1 
HETATM 6 C C4B NDP . . . H 3 72.003 -7.367 134.15 1 36.48 ? C4B NDP 402 B 1 
HETATM 7 O O4B NDP . . . H 3 71.684 -6.298 135.065 1 46.92 ? O4B NDP 402 B 1 
HETATM 8 C C3B NDP . . . H 3 72.728 -8.421 134.971 1 42.86 ? C3B NDP 402 B 1 
HETATM 9 O O3B NDP . . . H 3 74.157 -8.349 134.829 1 32.84 ? O3B NDP 402 B 1 
HETATM 10 C C2B NDP . . . H 3 72.386 -8.06 136.4 1 41.7 ? C2B NDP 402 B 1 
HETATM 11 O O2B NDP . . . H 3 73.426 -8.529 137.245 1 50.99 ? O2B NDP 402 B 1 
HETATM 12 C C1B NDP . . . H 3 72.234 -6.556 136.367 1 36.27 ? C1B NDP 402 B 1 
HETATM 13 N N9A NDP . . . H 3 71.284 -6.102 137.406 1 42.36 ? N9A NDP 402 B 1 
HETATM 14 O O3 NDP . . . H 3 69.301 -8.348 131.074 1 64.23 ? O3 NDP 402 B 1 
HETATM 15 P PN NDP . . . H 3 69.415 -8.101 129.475 1 59.99 ? PN NDP 402 B 1 
HETATM 16 O O1N NDP . . . H 3 68.367 -8.951 128.783 1 58.83 -1 O1N NDP 402 B 1 
HETATM 17 O O2N NDP . . . H 3 70.878 -8.255 129.113 1 34.82 ? O2N NDP 402 B 1 
HETATM 18 O O5D NDP . . . H 3 68.997 -6.54 129.323 1 46.25 ? O5D NDP 402 B 1 
HETATM 19 P P2B NDP . . . H 3 73.191 -9.969 137.944 1 45.79 ? P2B NDP 402 B 1 
HETATM 20 O O1X NDP . . . H 3 73.082 -10.939 136.783 1 43.67 ? O1X NDP 402 B 1 
HETATM 21 O O2X NDP . . . H 3 71.889 -9.784 138.692 1 51.96 -1 O2X NDP 402 B 1 
HETATM 22 O O3X NDP . . . H 3 74.424 -10.133 138.823 1 42.48 -1 O3X NDP 402 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           22 
#