data_4RF0 # _model_server_result.job_id p8W47TuAZx23y348-orumA _model_server_result.datetime_utc '2024-10-28 02:31:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rf0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":101}' # _entry.id 4RF0 # _exptl.entry_id 4RF0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.11 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-AMINOPROPANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4RF0 _cell.length_a 176.972 _cell.length_b 176.972 _cell.length_c 84.549 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RF0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 196 A CYS 1675 1_555 C ZN ZN . A ZN 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc2 A SG CYS 193 A CYS 1672 1_555 C ZN ZN . A ZN 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc3 A SG CYS 230 A CYS 1709 1_555 C ZN ZN . A ZN 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc4 A SG CYS 228 A CYS 1707 1_555 C ZN ZN . A ZN 1901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? covale ? covale1 A SG CYS 113 A CYS 1592 1_555 K CA 3CN . B 3CN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale2 B C GLY 75 B GLY 75 1_555 K ND 3CN . B 3CN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? # _chem_comp.formula 'C3 H9 N' _chem_comp.formula_weight 59.11 _chem_comp.id 3CN _chem_comp.mon_nstd_flag . _chem_comp.name 3-AMINOPROPANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4RF0 _atom_sites.fract_transf_matrix[1][1] 0.005651 _atom_sites.fract_transf_matrix[1][2] 0.003262 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006525 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011827 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 1901 1 ZN ZN . D 4 SO4 A 1 1902 2 SO4 SO4 . E 4 SO4 A 1 1903 4 SO4 SO4 . F 4 SO4 A 1 1904 5 SO4 SO4 . G 4 SO4 A 1 1905 6 SO4 SO4 . H 4 SO4 A 1 1906 7 SO4 SO4 . I 4 SO4 A 1 1907 9 SO4 SO4 . J 4 SO4 A 1 1908 10 SO4 SO4 . K 5 3CN B 1 101 76 3CN 3CN . L 4 SO4 B 1 102 3 SO4 SO4 . M 4 SO4 B 1 103 8 SO4 SO4 . N 6 HOH A 1 2001 12 HOH HOH . N 6 HOH A 2 2002 14 HOH HOH . N 6 HOH A 3 2003 15 HOH HOH . N 6 HOH A 4 2004 19 HOH HOH . N 6 HOH A 5 2005 20 HOH HOH . N 6 HOH A 6 2006 21 HOH HOH . N 6 HOH A 7 2007 24 HOH HOH . N 6 HOH A 8 2008 29 HOH HOH . N 6 HOH A 9 2009 34 HOH HOH . N 6 HOH A 10 2010 35 HOH HOH . N 6 HOH A 11 2011 36 HOH HOH . N 6 HOH A 12 2012 37 HOH HOH . N 6 HOH A 13 2013 38 HOH HOH . N 6 HOH A 14 2014 40 HOH HOH . N 6 HOH A 15 2015 42 HOH HOH . N 6 HOH A 16 2016 44 HOH HOH . N 6 HOH A 17 2017 47 HOH HOH . N 6 HOH A 18 2018 48 HOH HOH . N 6 HOH A 19 2019 49 HOH HOH . N 6 HOH A 20 2020 50 HOH HOH . N 6 HOH A 21 2021 51 HOH HOH . N 6 HOH A 22 2022 52 HOH HOH . N 6 HOH A 23 2023 53 HOH HOH . N 6 HOH A 24 2024 54 HOH HOH . N 6 HOH A 25 2025 55 HOH HOH . N 6 HOH A 26 2026 56 HOH HOH . N 6 HOH A 27 2027 58 HOH HOH . N 6 HOH A 28 2028 59 HOH HOH . N 6 HOH A 29 2029 60 HOH HOH . N 6 HOH A 30 2030 61 HOH HOH . N 6 HOH A 31 2031 62 HOH HOH . N 6 HOH A 32 2032 63 HOH HOH . N 6 HOH A 33 2033 64 HOH HOH . N 6 HOH A 34 2034 66 HOH HOH . O 6 HOH B 1 201 11 HOH HOH . O 6 HOH B 2 202 13 HOH HOH . O 6 HOH B 3 203 16 HOH HOH . O 6 HOH B 4 204 17 HOH HOH . O 6 HOH B 5 205 18 HOH HOH . O 6 HOH B 6 206 22 HOH HOH . O 6 HOH B 7 207 23 HOH HOH . O 6 HOH B 8 208 25 HOH HOH . O 6 HOH B 9 209 26 HOH HOH . O 6 HOH B 10 210 27 HOH HOH . O 6 HOH B 11 211 28 HOH HOH . O 6 HOH B 12 212 30 HOH HOH . O 6 HOH B 13 213 31 HOH HOH . O 6 HOH B 14 214 32 HOH HOH . O 6 HOH B 15 215 33 HOH HOH . O 6 HOH B 16 216 41 HOH HOH . O 6 HOH B 17 217 43 HOH HOH . O 6 HOH B 18 218 45 HOH HOH . O 6 HOH B 19 219 46 HOH HOH . O 6 HOH B 20 220 57 HOH HOH . O 6 HOH B 21 221 65 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CA 3CN . . . K 5 36.538 33.949 57.544 1 60.1 ? CA 3CN 101 B 1 HETATM 2 C CB 3CN . . . K 5 36.712 34.2 59.024 1 60 ? CB 3CN 101 B 1 HETATM 3 C CC 3CN . . . K 5 35.969 35.462 59.405 1 74.35 ? CC 3CN 101 B 1 HETATM 4 N ND 3CN . . . K 5 34.562 35.225 59.379 1 68.45 ? ND 3CN 101 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #