data_4RFD # _model_server_result.job_id s4gJin4JQzbgCtTOKI-B_Q _model_server_result.datetime_utc '2024-11-14 17:26:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rfd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 4RFD # _exptl.entry_id 4RFD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 61.017 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BICARBONATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.29 _cell.angle_gamma 90 _cell.entry_id 4RFD _cell.length_a 42.454 _cell.length_b 41.344 _cell.length_c 72.127 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RFD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 94 A HIS 94 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc2 A NE2 HIS 96 A HIS 96 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc3 A ND1 HIS 119 A HIS 119 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc4 B ZN ZN . A ZN 301 1_555 C NAA 3O5 . A 3O5 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.952 ? # _chem_comp.formula 'C H O3 -1' _chem_comp.formula_weight 61.017 _chem_comp.id BCT _chem_comp.mon_nstd_flag . _chem_comp.name 'BICARBONATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 BCT doub 102 n n C O2 BCT sing 103 n n C O3 BCT sing 104 n n O3 HO3 BCT sing 105 n n # _atom_sites.entry_id 4RFD _atom_sites.fract_transf_matrix[1][1] 0.023555 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024187 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014307 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 262 ZN ZN . C 3 3O5 A 1 302 1 3O5 DRG . D 3 3O5 A 1 303 1 3O5 DRG . E 4 BCT A 1 304 1006 BCT BCT . F 5 HOH A 1 401 2 HOH HOH . F 5 HOH A 2 402 4 HOH HOH . F 5 HOH A 3 403 5 HOH HOH . F 5 HOH A 4 404 6 HOH HOH . F 5 HOH A 5 405 7 HOH HOH . F 5 HOH A 6 406 8 HOH HOH . F 5 HOH A 7 407 9 HOH HOH . F 5 HOH A 8 408 10 HOH HOH . F 5 HOH A 9 409 11 HOH HOH . F 5 HOH A 10 410 12 HOH HOH . F 5 HOH A 11 411 13 HOH HOH . F 5 HOH A 12 412 14 HOH HOH . F 5 HOH A 13 413 15 HOH HOH . F 5 HOH A 14 414 16 HOH HOH . F 5 HOH A 15 415 17 HOH HOH . F 5 HOH A 16 416 18 HOH HOH . F 5 HOH A 17 417 19 HOH HOH . F 5 HOH A 18 418 20 HOH HOH . F 5 HOH A 19 419 21 HOH HOH . F 5 HOH A 20 420 22 HOH HOH . F 5 HOH A 21 421 23 HOH HOH . F 5 HOH A 22 422 24 HOH HOH . F 5 HOH A 23 423 25 HOH HOH . F 5 HOH A 24 424 26 HOH HOH . F 5 HOH A 25 425 27 HOH HOH . F 5 HOH A 26 426 28 HOH HOH . F 5 HOH A 27 427 29 HOH HOH . F 5 HOH A 28 428 30 HOH HOH . F 5 HOH A 29 429 31 HOH HOH . F 5 HOH A 30 430 32 HOH HOH . F 5 HOH A 31 431 33 HOH HOH . F 5 HOH A 32 432 34 HOH HOH . F 5 HOH A 33 433 35 HOH HOH . F 5 HOH A 34 434 36 HOH HOH . F 5 HOH A 35 435 37 HOH HOH . F 5 HOH A 36 436 38 HOH HOH . F 5 HOH A 37 437 39 HOH HOH . F 5 HOH A 38 438 40 HOH HOH . F 5 HOH A 39 439 41 HOH HOH . F 5 HOH A 40 440 42 HOH HOH . F 5 HOH A 41 441 43 HOH HOH . F 5 HOH A 42 442 44 HOH HOH . F 5 HOH A 43 443 45 HOH HOH . F 5 HOH A 44 444 47 HOH HOH . F 5 HOH A 45 445 48 HOH HOH . F 5 HOH A 46 446 49 HOH HOH . F 5 HOH A 47 447 50 HOH HOH . F 5 HOH A 48 448 51 HOH HOH . F 5 HOH A 49 449 52 HOH HOH . F 5 HOH A 50 450 53 HOH HOH . F 5 HOH A 51 451 54 HOH HOH . F 5 HOH A 52 452 55 HOH HOH . F 5 HOH A 53 453 56 HOH HOH . F 5 HOH A 54 454 57 HOH HOH . F 5 HOH A 55 455 58 HOH HOH . F 5 HOH A 56 456 59 HOH HOH . F 5 HOH A 57 457 60 HOH HOH . F 5 HOH A 58 458 61 HOH HOH . F 5 HOH A 59 459 62 HOH HOH . F 5 HOH A 60 460 63 HOH HOH . F 5 HOH A 61 461 64 HOH HOH . F 5 HOH A 62 462 65 HOH HOH . F 5 HOH A 63 463 66 HOH HOH . F 5 HOH A 64 464 67 HOH HOH . F 5 HOH A 65 465 68 HOH HOH . F 5 HOH A 66 466 69 HOH HOH . F 5 HOH A 67 467 70 HOH HOH . F 5 HOH A 68 468 71 HOH HOH . F 5 HOH A 69 469 72 HOH HOH . F 5 HOH A 70 470 73 HOH HOH . F 5 HOH A 71 471 74 HOH HOH . F 5 HOH A 72 472 75 HOH HOH . F 5 HOH A 73 473 76 HOH HOH . F 5 HOH A 74 474 77 HOH HOH . F 5 HOH A 75 475 78 HOH HOH . F 5 HOH A 76 476 79 HOH HOH . F 5 HOH A 77 477 80 HOH HOH . F 5 HOH A 78 478 81 HOH HOH . F 5 HOH A 79 479 82 HOH HOH . F 5 HOH A 80 480 83 HOH HOH . F 5 HOH A 81 481 84 HOH HOH . F 5 HOH A 82 482 85 HOH HOH . F 5 HOH A 83 483 1 HOH HOH . F 5 HOH A 84 484 2 HOH HOH . F 5 HOH A 85 485 3 HOH HOH . F 5 HOH A 86 486 4 HOH HOH . F 5 HOH A 87 487 5 HOH HOH . F 5 HOH A 88 488 6 HOH HOH . F 5 HOH A 89 489 7 HOH HOH . F 5 HOH A 90 490 8 HOH HOH . F 5 HOH A 91 491 9 HOH HOH . F 5 HOH A 92 492 10 HOH HOH . F 5 HOH A 93 493 11 HOH HOH . F 5 HOH A 94 494 12 HOH HOH . F 5 HOH A 95 495 13 HOH HOH . F 5 HOH A 96 496 14 HOH HOH . F 5 HOH A 97 497 15 HOH HOH . F 5 HOH A 98 498 16 HOH HOH . F 5 HOH A 99 499 17 HOH HOH . F 5 HOH A 100 500 18 HOH HOH . F 5 HOH A 101 501 19 HOH HOH . F 5 HOH A 102 502 20 HOH HOH . F 5 HOH A 103 503 22 HOH HOH . F 5 HOH A 104 504 24 HOH HOH . F 5 HOH A 105 505 25 HOH HOH . F 5 HOH A 106 506 26 HOH HOH . F 5 HOH A 107 507 27 HOH HOH . F 5 HOH A 108 508 28 HOH HOH . F 5 HOH A 109 509 29 HOH HOH . F 5 HOH A 110 510 30 HOH HOH . F 5 HOH A 111 511 31 HOH HOH . F 5 HOH A 112 512 32 HOH HOH . F 5 HOH A 113 513 33 HOH HOH . F 5 HOH A 114 514 34 HOH HOH . F 5 HOH A 115 515 35 HOH HOH . F 5 HOH A 116 516 37 HOH HOH . F 5 HOH A 117 517 38 HOH HOH . F 5 HOH A 118 518 40 HOH HOH . F 5 HOH A 119 519 41 HOH HOH . F 5 HOH A 120 520 42 HOH HOH . F 5 HOH A 121 521 43 HOH HOH . F 5 HOH A 122 522 44 HOH HOH . F 5 HOH A 123 523 45 HOH HOH . F 5 HOH A 124 524 46 HOH HOH . F 5 HOH A 125 525 47 HOH HOH . F 5 HOH A 126 526 48 HOH HOH . F 5 HOH A 127 527 50 HOH HOH . F 5 HOH A 128 528 51 HOH HOH . F 5 HOH A 129 529 52 HOH HOH . F 5 HOH A 130 530 53 HOH HOH . F 5 HOH A 131 531 54 HOH HOH . F 5 HOH A 132 532 55 HOH HOH . F 5 HOH A 133 533 56 HOH HOH . F 5 HOH A 134 534 57 HOH HOH . F 5 HOH A 135 535 58 HOH HOH . F 5 HOH A 136 536 59 HOH HOH . F 5 HOH A 137 537 60 HOH HOH . F 5 HOH A 138 538 3 HOH HOH . F 5 HOH A 139 539 4 HOH HOH . F 5 HOH A 140 540 5 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C BCT . . . E 4 4.944 -9.124 84.865 1 25.11 ? C BCT 304 A 1 HETATM 2 O O1 BCT . . . E 4 5.309 -8.05 84.384 1 40.81 ? O1 BCT 304 A 1 HETATM 3 O O2 BCT . . . E 4 5.324 -10.261 84.567 1 40.07 ? O2 BCT 304 A 1 HETATM 4 O O3 BCT . . . E 4 4.853 -9.022 86.303 1 42.16 ? O3 BCT 304 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #