data_4RGS # _model_server_result.job_id eSFQF89Mtxmgm1MdMPZdBA _model_server_result.datetime_utc '2024-11-13 05:33:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rgs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 4RGS # _exptl.entry_id 4RGS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 152.147 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-hydroxy-3-methoxybenzaldehyde _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4RGS _cell.length_a 63.679 _cell.length_b 82.816 _cell.length_c 63.026 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RGS _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_755 -x+2,-y,z -1 0 0 0 -1 0 0 0 1 127.358 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C TYR 22 A TYR 19 1_555 A N MSE 23 A MSE 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C MSE 23 A MSE 20 1_555 A N ILE 24 A ILE 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 A C GLN 127 A GLN 124 1_555 A N MSE 128 A MSE 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale4 A C MSE 128 A MSE 125 1_555 A N LEU 129 A LEU 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale5 A C LEU 146 A LEU 143 1_555 A N MSE 147 A MSE 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C MSE 147 A MSE 144 1_555 A N VAL 148 A VAL 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale7 B C TYR 22 B TYR 19 1_555 B N MSE 23 B MSE 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale8 B C MSE 23 B MSE 20 1_555 B N ILE 24 B ILE 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale9 B C GLN 127 B GLN 124 1_555 B N MSE 128 B MSE 125 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale10 B C GLN 127 B GLN 124 1_555 B N MSE 128 B MSE 125 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale11 B C MSE 128 B MSE 125 1_555 B N LEU 129 B LEU 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale12 B C LEU 146 B LEU 143 1_555 B N MSE 147 B MSE 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale13 B C MSE 147 B MSE 144 1_555 B N VAL 148 B VAL 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'C8 H8 O3' _chem_comp.formula_weight 152.147 _chem_comp.id V55 _chem_comp.mon_nstd_flag . _chem_comp.name 4-hydroxy-3-methoxybenzaldehyde _chem_comp.type non-polymer _chem_comp.pdbx_synonyms p-vanillin # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAK CAG V55 doub 375 n y CAK CAJ V55 sing 376 n y CAK OAH V55 sing 377 n n CAG CAI V55 sing 378 n y CAI CAD V55 sing 379 n n CAI CAE V55 doub 380 n y CAD OAB V55 doub 381 n n CAF CAJ V55 doub 382 n y CAF CAE V55 sing 383 n y CAJ OAC V55 sing 384 n n CAA OAH V55 sing 385 n n CAG HAG V55 sing 386 n n CAD HAD V55 sing 387 n n CAE HAE V55 sing 388 n n CAF HAF V55 sing 389 n n OAC HAC V55 sing 390 n n CAA HAA1 V55 sing 391 n n CAA HAA2 V55 sing 392 n n CAA HAA3 V55 sing 393 n n # _atom_sites.entry_id 4RGS _atom_sites.fract_transf_matrix[1][1] 0.015704 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012075 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015866 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 V55 A 1 201 171 V55 VLN . D 3 SO4 A 1 202 172 SO4 SO4 . E 4 GOL A 1 203 173 GOL GOL . F 3 SO4 A 1 204 172 SO4 SO4 . G 2 V55 B 1 201 171 V55 VLN . H 4 GOL B 1 202 173 GOL GOL . I 5 HOH A 1 301 1 HOH HOH . I 5 HOH A 2 302 2 HOH HOH . I 5 HOH A 3 303 3 HOH HOH . I 5 HOH A 4 304 6 HOH HOH . I 5 HOH A 5 305 8 HOH HOH . I 5 HOH A 6 306 9 HOH HOH . I 5 HOH A 7 307 11 HOH HOH . I 5 HOH A 8 308 12 HOH HOH . I 5 HOH A 9 309 14 HOH HOH . I 5 HOH A 10 310 15 HOH HOH . I 5 HOH A 11 311 16 HOH HOH . I 5 HOH A 12 312 17 HOH HOH . I 5 HOH A 13 313 18 HOH HOH . I 5 HOH A 14 314 20 HOH HOH . I 5 HOH A 15 315 21 HOH HOH . I 5 HOH A 16 316 25 HOH HOH . I 5 HOH A 17 317 26 HOH HOH . I 5 HOH A 18 318 27 HOH HOH . I 5 HOH A 19 319 30 HOH HOH . I 5 HOH A 20 320 33 HOH HOH . I 5 HOH A 21 321 34 HOH HOH . I 5 HOH A 22 322 35 HOH HOH . I 5 HOH A 23 323 36 HOH HOH . I 5 HOH A 24 324 38 HOH HOH . I 5 HOH A 25 325 39 HOH HOH . I 5 HOH A 26 326 43 HOH HOH . I 5 HOH A 27 327 44 HOH HOH . I 5 HOH A 28 328 46 HOH HOH . I 5 HOH A 29 329 47 HOH HOH . I 5 HOH A 30 330 48 HOH HOH . I 5 HOH A 31 331 49 HOH HOH . I 5 HOH A 32 332 50 HOH HOH . I 5 HOH A 33 333 51 HOH HOH . I 5 HOH A 34 334 52 HOH HOH . I 5 HOH A 35 335 53 HOH HOH . I 5 HOH A 36 336 57 HOH HOH . I 5 HOH A 37 337 58 HOH HOH . I 5 HOH A 38 338 59 HOH HOH . I 5 HOH A 39 339 62 HOH HOH . I 5 HOH A 40 340 63 HOH HOH . I 5 HOH A 41 341 64 HOH HOH . I 5 HOH A 42 342 65 HOH HOH . I 5 HOH A 43 343 66 HOH HOH . I 5 HOH A 44 344 67 HOH HOH . I 5 HOH A 45 345 68 HOH HOH . I 5 HOH A 46 346 70 HOH HOH . I 5 HOH A 47 347 71 HOH HOH . I 5 HOH A 48 348 79 HOH HOH . I 5 HOH A 49 349 80 HOH HOH . I 5 HOH A 50 350 81 HOH HOH . I 5 HOH A 51 351 82 HOH HOH . I 5 HOH A 52 352 83 HOH HOH . I 5 HOH A 53 353 56 HOH HOH . J 5 HOH B 1 301 4 HOH HOH . J 5 HOH B 2 302 5 HOH HOH . J 5 HOH B 3 303 7 HOH HOH . J 5 HOH B 4 304 10 HOH HOH . J 5 HOH B 5 305 13 HOH HOH . J 5 HOH B 6 306 19 HOH HOH . J 5 HOH B 7 307 307 HOH HOH . J 5 HOH B 8 308 23 HOH HOH . J 5 HOH B 9 309 24 HOH HOH . J 5 HOH B 10 310 28 HOH HOH . J 5 HOH B 11 311 29 HOH HOH . J 5 HOH B 12 312 31 HOH HOH . J 5 HOH B 13 313 32 HOH HOH . J 5 HOH B 14 314 37 HOH HOH . J 5 HOH B 15 315 40 HOH HOH . J 5 HOH B 16 316 41 HOH HOH . J 5 HOH B 17 317 42 HOH HOH . J 5 HOH B 18 318 45 HOH HOH . J 5 HOH B 19 319 54 HOH HOH . J 5 HOH B 20 320 55 HOH HOH . J 5 HOH B 21 321 60 HOH HOH . J 5 HOH B 22 322 61 HOH HOH . J 5 HOH B 23 323 69 HOH HOH . J 5 HOH B 24 324 72 HOH HOH . J 5 HOH B 25 325 73 HOH HOH . J 5 HOH B 26 326 74 HOH HOH . J 5 HOH B 27 327 75 HOH HOH . J 5 HOH B 28 328 76 HOH HOH . J 5 HOH B 29 329 77 HOH HOH . J 5 HOH B 30 330 78 HOH HOH . J 5 HOH B 31 331 84 HOH HOH . J 5 HOH B 32 332 85 HOH HOH . J 5 HOH B 33 333 86 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAI V55 . . . C 2 48.809 16.54 58.051 1 44.43 ? CAI V55 201 A 1 HETATM 2 C CAG V55 . . . C 2 49.312 16.598 59.447 1 44.52 ? CAG V55 201 A 1 HETATM 3 C CAK V55 . . . C 2 49.8 15.464 60.029 1 44.22 ? CAK V55 201 A 1 HETATM 4 C CAJ V55 . . . C 2 49.816 14.248 59.309 1 43.11 ? CAJ V55 201 A 1 HETATM 5 C CAF V55 . . . C 2 49.315 14.192 57.961 1 37.64 ? CAF V55 201 A 1 HETATM 6 O OAB V55 . . . C 2 47.46 17.574 56.271 1 48.42 ? OAB V55 201 A 1 HETATM 7 C CAE V55 . . . C 2 48.815 15.364 57.35 1 35.91 ? CAE V55 201 A 1 HETATM 8 C CAD V55 . . . C 2 48.257 17.799 57.396 1 42.36 ? CAD V55 201 A 1 HETATM 9 C CAA V55 . . . C 2 50.695 16.679 61.95 1 34.7 ? CAA V55 201 A 1 HETATM 10 O OAH V55 . . . C 2 50.299 15.485 61.335 1 43.59 ? OAH V55 201 A 1 HETATM 11 O OAC V55 . . . C 2 50.34 13.103 59.922 1 39.35 ? OAC V55 201 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 11 #