data_4RIG # _model_server_result.job_id CFp8Hs8sDmA8ps754DAINA _model_server_result.datetime_utc '2024-11-25 11:24:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rig # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":400}' # _entry.id 4RIG # _exptl.entry_id 4RIG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 79.3 _cell.angle_beta 71.72 _cell.angle_gamma 87.69 _cell.entry_id 4RIG _cell.length_a 52.943 _cell.length_b 59.109 _cell.length_c 63.111 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RIG _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C MG MG . A MG 401 1_555 E O HOH . A HOH 597 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc2 C MG MG . A MG 401 1_555 E O HOH . A HOH 598 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc3 C MG MG . A MG 401 1_555 E O HOH . A HOH 599 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc4 C MG MG . A MG 401 1_555 E O HOH . A HOH 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc5 B OD1 ASP 150 B ASP 150 1_555 D MG MG . B MG 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? metalc ? metalc6 D MG MG . B MG 400 1_555 F O HOH . B HOH 539 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc7 D MG MG . B MG 400 1_555 F O HOH . B HOH 564 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc8 D MG MG . B MG 400 1_555 F O HOH . B HOH 565 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc9 D MG MG . B MG 400 1_555 F O HOH . B HOH 566 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc10 D MG MG . B MG 400 1_555 F O HOH . B HOH 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4RIG _atom_sites.fract_transf_matrix[1][1] 0.018888 _atom_sites.fract_transf_matrix[1][2] -0.000761 _atom_sites.fract_transf_matrix[1][3] -0.006205 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016932 _atom_sites.fract_transf_matrix[2][3] -0.00314 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016972 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 401 401 MG MG . D 2 MG B 1 400 400 MG MG . E 3 HOH A 1 501 1 HOH HOH . E 3 HOH A 2 502 2 HOH HOH . E 3 HOH A 3 503 4 HOH HOH . E 3 HOH A 4 504 5 HOH HOH . E 3 HOH A 5 505 6 HOH HOH . E 3 HOH A 6 506 8 HOH HOH . E 3 HOH A 7 507 9 HOH HOH . E 3 HOH A 8 508 11 HOH HOH . E 3 HOH A 9 509 13 HOH HOH . E 3 HOH A 10 510 15 HOH HOH . E 3 HOH A 11 511 18 HOH HOH . E 3 HOH A 12 512 20 HOH HOH . E 3 HOH A 13 513 21 HOH HOH . E 3 HOH A 14 514 22 HOH HOH . E 3 HOH A 15 515 23 HOH HOH . E 3 HOH A 16 516 28 HOH HOH . E 3 HOH A 17 517 30 HOH HOH . E 3 HOH A 18 518 31 HOH HOH . E 3 HOH A 19 519 33 HOH HOH . E 3 HOH A 20 520 34 HOH HOH . E 3 HOH A 21 521 35 HOH HOH . E 3 HOH A 22 522 38 HOH HOH . E 3 HOH A 23 523 41 HOH HOH . E 3 HOH A 24 524 44 HOH HOH . E 3 HOH A 25 525 47 HOH HOH . E 3 HOH A 26 526 49 HOH HOH . E 3 HOH A 27 527 50 HOH HOH . E 3 HOH A 28 528 51 HOH HOH . E 3 HOH A 29 529 55 HOH HOH . E 3 HOH A 30 530 56 HOH HOH . E 3 HOH A 31 531 58 HOH HOH . E 3 HOH A 32 532 59 HOH HOH . E 3 HOH A 33 533 61 HOH HOH . E 3 HOH A 34 534 62 HOH HOH . E 3 HOH A 35 535 64 HOH HOH . E 3 HOH A 36 536 65 HOH HOH . E 3 HOH A 37 537 66 HOH HOH . E 3 HOH A 38 538 67 HOH HOH . E 3 HOH A 39 539 69 HOH HOH . E 3 HOH A 40 540 73 HOH HOH . E 3 HOH A 41 541 75 HOH HOH . E 3 HOH A 42 542 78 HOH HOH . E 3 HOH A 43 543 79 HOH HOH . E 3 HOH A 44 544 80 HOH HOH . E 3 HOH A 45 545 81 HOH HOH . E 3 HOH A 46 546 86 HOH HOH . E 3 HOH A 47 547 88 HOH HOH . E 3 HOH A 48 548 89 HOH HOH . E 3 HOH A 49 549 92 HOH HOH . E 3 HOH A 50 550 93 HOH HOH . E 3 HOH A 51 551 95 HOH HOH . E 3 HOH A 52 552 98 HOH HOH . E 3 HOH A 53 553 100 HOH HOH . E 3 HOH A 54 554 103 HOH HOH . E 3 HOH A 55 555 106 HOH HOH . E 3 HOH A 56 556 107 HOH HOH . E 3 HOH A 57 557 108 HOH HOH . E 3 HOH A 58 558 139 HOH HOH . E 3 HOH A 59 559 140 HOH HOH . E 3 HOH A 60 560 141 HOH HOH . E 3 HOH A 61 561 142 HOH HOH . E 3 HOH A 62 562 143 HOH HOH . E 3 HOH A 63 563 144 HOH HOH . E 3 HOH A 64 564 145 HOH HOH . E 3 HOH A 65 565 146 HOH HOH . E 3 HOH A 66 566 147 HOH HOH . E 3 HOH A 67 567 148 HOH HOH . E 3 HOH A 68 568 149 HOH HOH . E 3 HOH A 69 569 150 HOH HOH . E 3 HOH A 70 570 151 HOH HOH . E 3 HOH A 71 571 152 HOH HOH . E 3 HOH A 72 572 153 HOH HOH . E 3 HOH A 73 573 159 HOH HOH . E 3 HOH A 74 574 160 HOH HOH . E 3 HOH A 75 575 161 HOH HOH . E 3 HOH A 76 576 164 HOH HOH . E 3 HOH A 77 577 165 HOH HOH . E 3 HOH A 78 578 166 HOH HOH . E 3 HOH A 79 579 167 HOH HOH . E 3 HOH A 80 580 168 HOH HOH . E 3 HOH A 81 581 169 HOH HOH . E 3 HOH A 82 582 171 HOH HOH . E 3 HOH A 83 583 173 HOH HOH . E 3 HOH A 84 584 174 HOH HOH . E 3 HOH A 85 585 175 HOH HOH . E 3 HOH A 86 586 176 HOH HOH . E 3 HOH A 87 587 180 HOH HOH . E 3 HOH A 88 588 183 HOH HOH . E 3 HOH A 89 589 184 HOH HOH . E 3 HOH A 90 590 185 HOH HOH . E 3 HOH A 91 591 186 HOH HOH . E 3 HOH A 92 592 187 HOH HOH . E 3 HOH A 93 593 188 HOH HOH . E 3 HOH A 94 594 189 HOH HOH . E 3 HOH A 95 595 192 HOH HOH . E 3 HOH A 96 596 193 HOH HOH . E 3 HOH A 97 597 194 HOH HOH . E 3 HOH A 98 598 195 HOH HOH . E 3 HOH A 99 599 196 HOH HOH . E 3 HOH A 100 600 197 HOH HOH . E 3 HOH A 101 601 198 HOH HOH . E 3 HOH A 102 602 199 HOH HOH . E 3 HOH A 103 603 200 HOH HOH . E 3 HOH A 104 604 201 HOH HOH . E 3 HOH A 105 605 202 HOH HOH . E 3 HOH A 106 606 203 HOH HOH . E 3 HOH A 107 607 204 HOH HOH . E 3 HOH A 108 608 205 HOH HOH . E 3 HOH A 109 609 206 HOH HOH . E 3 HOH A 110 610 207 HOH HOH . E 3 HOH A 111 611 208 HOH HOH . E 3 HOH A 112 612 209 HOH HOH . E 3 HOH A 113 613 210 HOH HOH . E 3 HOH A 114 614 219 HOH HOH . E 3 HOH A 115 615 222 HOH HOH . E 3 HOH A 116 616 223 HOH HOH . E 3 HOH A 117 617 226 HOH HOH . F 3 HOH B 1 501 3 HOH HOH . F 3 HOH B 2 502 7 HOH HOH . F 3 HOH B 3 503 10 HOH HOH . F 3 HOH B 4 504 12 HOH HOH . F 3 HOH B 5 505 16 HOH HOH . F 3 HOH B 6 506 17 HOH HOH . F 3 HOH B 7 507 19 HOH HOH . F 3 HOH B 8 508 25 HOH HOH . F 3 HOH B 9 509 26 HOH HOH . F 3 HOH B 10 510 27 HOH HOH . F 3 HOH B 11 511 29 HOH HOH . F 3 HOH B 12 512 32 HOH HOH . F 3 HOH B 13 513 36 HOH HOH . F 3 HOH B 14 514 37 HOH HOH . F 3 HOH B 15 515 39 HOH HOH . F 3 HOH B 16 516 40 HOH HOH . F 3 HOH B 17 517 42 HOH HOH . F 3 HOH B 18 518 43 HOH HOH . F 3 HOH B 19 519 46 HOH HOH . F 3 HOH B 20 520 48 HOH HOH . F 3 HOH B 21 521 52 HOH HOH . F 3 HOH B 22 522 53 HOH HOH . F 3 HOH B 23 523 54 HOH HOH . F 3 HOH B 24 524 57 HOH HOH . F 3 HOH B 25 525 60 HOH HOH . F 3 HOH B 26 526 63 HOH HOH . F 3 HOH B 27 527 68 HOH HOH . F 3 HOH B 28 528 70 HOH HOH . F 3 HOH B 29 529 71 HOH HOH . F 3 HOH B 30 530 72 HOH HOH . F 3 HOH B 31 531 74 HOH HOH . F 3 HOH B 32 532 76 HOH HOH . F 3 HOH B 33 533 77 HOH HOH . F 3 HOH B 34 534 82 HOH HOH . F 3 HOH B 35 535 83 HOH HOH . F 3 HOH B 36 536 84 HOH HOH . F 3 HOH B 37 537 85 HOH HOH . F 3 HOH B 38 538 87 HOH HOH . F 3 HOH B 39 539 91 HOH HOH . F 3 HOH B 40 540 94 HOH HOH . F 3 HOH B 41 541 96 HOH HOH . F 3 HOH B 42 542 97 HOH HOH . F 3 HOH B 43 543 99 HOH HOH . F 3 HOH B 44 544 101 HOH HOH . F 3 HOH B 45 545 102 HOH HOH . F 3 HOH B 46 546 104 HOH HOH . F 3 HOH B 47 547 105 HOH HOH . F 3 HOH B 48 548 109 HOH HOH . F 3 HOH B 49 549 110 HOH HOH . F 3 HOH B 50 550 111 HOH HOH . F 3 HOH B 51 551 112 HOH HOH . F 3 HOH B 52 552 113 HOH HOH . F 3 HOH B 53 553 114 HOH HOH . F 3 HOH B 54 554 115 HOH HOH . F 3 HOH B 55 555 116 HOH HOH . F 3 HOH B 56 556 117 HOH HOH . F 3 HOH B 57 557 118 HOH HOH . F 3 HOH B 58 558 120 HOH HOH . F 3 HOH B 59 559 121 HOH HOH . F 3 HOH B 60 560 122 HOH HOH . F 3 HOH B 61 561 123 HOH HOH . F 3 HOH B 62 562 124 HOH HOH . F 3 HOH B 63 563 125 HOH HOH . F 3 HOH B 64 564 126 HOH HOH . F 3 HOH B 65 565 127 HOH HOH . F 3 HOH B 66 566 128 HOH HOH . F 3 HOH B 67 567 129 HOH HOH . F 3 HOH B 68 568 130 HOH HOH . F 3 HOH B 69 569 131 HOH HOH . F 3 HOH B 70 570 132 HOH HOH . F 3 HOH B 71 571 133 HOH HOH . F 3 HOH B 72 572 134 HOH HOH . F 3 HOH B 73 573 135 HOH HOH . F 3 HOH B 74 574 136 HOH HOH . F 3 HOH B 75 575 137 HOH HOH . F 3 HOH B 76 576 138 HOH HOH . F 3 HOH B 77 577 154 HOH HOH . F 3 HOH B 78 578 155 HOH HOH . F 3 HOH B 79 579 156 HOH HOH . F 3 HOH B 80 580 157 HOH HOH . F 3 HOH B 81 581 158 HOH HOH . F 3 HOH B 82 582 163 HOH HOH . F 3 HOH B 83 583 170 HOH HOH . F 3 HOH B 84 584 172 HOH HOH . F 3 HOH B 85 585 177 HOH HOH . F 3 HOH B 86 586 178 HOH HOH . F 3 HOH B 87 587 179 HOH HOH . F 3 HOH B 88 588 181 HOH HOH . F 3 HOH B 89 589 182 HOH HOH . F 3 HOH B 90 590 190 HOH HOH . F 3 HOH B 91 591 191 HOH HOH . F 3 HOH B 92 592 211 HOH HOH . F 3 HOH B 93 593 212 HOH HOH . F 3 HOH B 94 594 213 HOH HOH . F 3 HOH B 95 595 214 HOH HOH . F 3 HOH B 96 596 215 HOH HOH . F 3 HOH B 97 597 220 HOH HOH . F 3 HOH B 98 598 221 HOH HOH . F 3 HOH B 99 599 224 HOH HOH . F 3 HOH B 100 600 225 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -28.767 _atom_site.Cartn_y 26.8 _atom_site.Cartn_z 2.117 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36.73 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 400 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 105 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #