data_4RJD
#
_model_server_result.job_id            jYnHCPQF3Vc_Mrz3T89AcQ 
_model_server_result.datetime_utc      '2024-11-14 18:45:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4rjd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":205}' 
#
_entry.id    4RJD 
#
_exptl.entry_id    4RJD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              238.278 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PENTAETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          93 
_cell.angle_gamma         90 
_cell.entry_id            4RJD 
_cell.length_a            24.606 
_cell.length_b            85.637 
_cell.length_c            35.341 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4RJD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,P 1 1 
B,J,K,L,M,N,O,Q 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 12 A ASP 93 1_555 D CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? 
metalc ? metalc2 A OD1 ASP 14 A ASP 95 1_555 D CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? 
metalc ? metalc3 A OD1 ASN 16 A ASN 97 1_555 D CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
metalc ? metalc4 A O TYR 18 A TYR 99 1_555 D CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? 
metalc ? metalc5 A OE1 GLU 23 A GLU 104 1_555 D CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? 
metalc ? metalc6 A OE2 GLU 23 A GLU 104 1_555 D CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? 
metalc ? metalc7 A OD1 ASP 48 A ASP 129 1_555 C CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? 
metalc ? metalc8 A OD1 ASP 50 A ASP 131 1_555 C CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? 
metalc ? metalc9 A OD1 ASP 52 A ASP 133 1_555 C CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? 
metalc ? metalc10 A O GLN 54 A GLN 135 1_555 C CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? 
metalc ? metalc11 A OE2 GLU 59 A GLU 140 1_555 C CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? 
metalc ? metalc12 A OE1 GLU 59 A GLU 140 1_555 C CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? 
metalc ? metalc13 C CA CA . A CA 201 1_555 P O HOH . A HOH 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? 
metalc ? metalc14 D CA CA . A CA 202 1_555 P O HOH . A HOH 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? 
metalc ? metalc15 B OD1 ASP 12 B ASP 93 1_555 J CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? 
metalc ? metalc16 B OD1 ASP 14 B ASP 95 1_555 J CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? 
metalc ? metalc17 B OD1 ASN 16 B ASN 97 1_555 J CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? 
metalc ? metalc18 B O TYR 18 B TYR 99 1_555 J CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? 
metalc ? metalc19 B OE1 GLU 23 B GLU 104 1_555 J CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? 
metalc ? metalc20 B OE2 GLU 23 B GLU 104 1_555 J CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? 
metalc ? metalc21 B OD1 ASP 48 B ASP 129 1_555 K CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? 
metalc ? metalc22 B OD1 ASP 50 B ASP 131 1_555 K CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? 
metalc ? metalc23 B OD1 ASP 52 B ASP 133 1_555 K CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
metalc ? metalc24 B O GLN 54 B GLN 135 1_555 K CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? 
metalc ? metalc25 B OE1 GLU 59 B GLU 140 1_555 K CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? 
metalc ? metalc26 B OE2 GLU 59 B GLU 140 1_555 K CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? 
metalc ? metalc27 J CA CA . B CA 201 1_555 Q O HOH . B HOH 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? 
metalc ? metalc28 K CA CA . B CA 202 1_555 Q O HOH . B HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? 
#
_chem_comp.formula           'C10 H22 O6' 
_chem_comp.formula_weight    238.278 
_chem_comp.id                1PE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PENTAETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     PEG400 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OH2 C12 1PE sing 1 n n 
OH2 HO2 1PE sing 2 n n 
C12 C22 1PE sing 3 n n 
C12 H121 1PE sing 4 n n 
C12 H122 1PE sing 5 n n 
C22 OH3 1PE sing 6 n n 
C22 H221 1PE sing 7 n n 
C22 H222 1PE sing 8 n n 
OH3 C23 1PE sing 9 n n 
C13 C23 1PE sing 10 n n 
C13 OH4 1PE sing 11 n n 
C13 H131 1PE sing 12 n n 
C13 H132 1PE sing 13 n n 
C23 H231 1PE sing 14 n n 
C23 H232 1PE sing 15 n n 
OH4 C24 1PE sing 16 n n 
C14 C24 1PE sing 17 n n 
C14 OH5 1PE sing 18 n n 
C14 H141 1PE sing 19 n n 
C14 H142 1PE sing 20 n n 
C24 H241 1PE sing 21 n n 
C24 H242 1PE sing 22 n n 
OH5 C25 1PE sing 23 n n 
C15 C25 1PE sing 24 n n 
C15 OH6 1PE sing 25 n n 
C15 H151 1PE sing 26 n n 
C15 H152 1PE sing 27 n n 
C25 H251 1PE sing 28 n n 
C25 H252 1PE sing 29 n n 
OH6 C26 1PE sing 30 n n 
C16 C26 1PE sing 31 n n 
C16 OH7 1PE sing 32 n n 
C16 H161 1PE sing 33 n n 
C16 H162 1PE sing 34 n n 
C26 H261 1PE sing 35 n n 
C26 H262 1PE sing 36 n n 
OH7 HO7 1PE sing 37 n n 
#
_atom_sites.entry_id                     4RJD 
_atom_sites.fract_transf_matrix[1][1]    0.04064 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002131 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011677 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.028335 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CA A 1 201 149 CA CA . 
D 2 CA A 1 202 150 CA CA . 
E 3 TFP A 1 203 3 TFP TFP . 
F 3 TFP A 1 204 4 TFP TFP . 
G 4 1PE A 1 205 5 1PE 1PE . 
H 5 CL A 1 206 7 CL CL . 
I 6 OXL A 1 207 9 OXL OXL . 
J 2 CA B 1 201 149 CA CA . 
K 2 CA B 1 202 150 CA CA . 
L 3 TFP B 1 203 1 TFP TFP . 
M 3 TFP B 1 204 2 TFP TFP . 
N 7 SCN B 1 205 6 SCN SCN . 
O 5 CL B 1 206 8 CL CL . 
P 8 HOH A 1 301 1 HOH HOH . 
P 8 HOH A 2 302 5 HOH HOH . 
P 8 HOH A 3 303 6 HOH HOH . 
P 8 HOH A 4 304 7 HOH HOH . 
P 8 HOH A 5 305 8 HOH HOH . 
P 8 HOH A 6 306 9 HOH HOH . 
P 8 HOH A 7 307 11 HOH HOH . 
P 8 HOH A 8 308 15 HOH HOH . 
P 8 HOH A 9 309 18 HOH HOH . 
P 8 HOH A 10 310 19 HOH HOH . 
P 8 HOH A 11 311 20 HOH HOH . 
P 8 HOH A 12 312 22 HOH HOH . 
P 8 HOH A 13 313 25 HOH HOH . 
P 8 HOH A 14 314 26 HOH HOH . 
P 8 HOH A 15 315 31 HOH HOH . 
P 8 HOH A 16 316 32 HOH HOH . 
P 8 HOH A 17 317 34 HOH HOH . 
P 8 HOH A 18 318 36 HOH HOH . 
P 8 HOH A 19 319 38 HOH HOH . 
P 8 HOH A 20 320 41 HOH HOH . 
P 8 HOH A 21 321 43 HOH HOH . 
P 8 HOH A 22 322 47 HOH HOH . 
P 8 HOH A 23 323 49 HOH HOH . 
P 8 HOH A 24 324 50 HOH HOH . 
P 8 HOH A 25 325 55 HOH HOH . 
P 8 HOH A 26 326 56 HOH HOH . 
P 8 HOH A 27 327 57 HOH HOH . 
P 8 HOH A 28 328 59 HOH HOH . 
P 8 HOH A 29 329 60 HOH HOH . 
P 8 HOH A 30 330 61 HOH HOH . 
P 8 HOH A 31 331 63 HOH HOH . 
P 8 HOH A 32 332 67 HOH HOH . 
P 8 HOH A 33 333 68 HOH HOH . 
P 8 HOH A 34 334 77 HOH HOH . 
P 8 HOH A 35 335 80 HOH HOH . 
P 8 HOH A 36 336 86 HOH HOH . 
P 8 HOH A 37 337 89 HOH HOH . 
Q 8 HOH B 1 301 2 HOH HOH . 
Q 8 HOH B 2 302 3 HOH HOH . 
Q 8 HOH B 3 303 4 HOH HOH . 
Q 8 HOH B 4 304 10 HOH HOH . 
Q 8 HOH B 5 305 12 HOH HOH . 
Q 8 HOH B 6 306 13 HOH HOH . 
Q 8 HOH B 7 307 14 HOH HOH . 
Q 8 HOH B 8 308 16 HOH HOH . 
Q 8 HOH B 9 309 17 HOH HOH . 
Q 8 HOH B 10 310 21 HOH HOH . 
Q 8 HOH B 11 311 23 HOH HOH . 
Q 8 HOH B 12 312 24 HOH HOH . 
Q 8 HOH B 13 313 27 HOH HOH . 
Q 8 HOH B 14 314 28 HOH HOH . 
Q 8 HOH B 15 315 29 HOH HOH . 
Q 8 HOH B 16 316 30 HOH HOH . 
Q 8 HOH B 17 317 33 HOH HOH . 
Q 8 HOH B 18 318 35 HOH HOH . 
Q 8 HOH B 19 319 37 HOH HOH . 
Q 8 HOH B 20 320 39 HOH HOH . 
Q 8 HOH B 21 321 40 HOH HOH . 
Q 8 HOH B 22 322 42 HOH HOH . 
Q 8 HOH B 23 323 45 HOH HOH . 
Q 8 HOH B 24 324 46 HOH HOH . 
Q 8 HOH B 25 325 48 HOH HOH . 
Q 8 HOH B 26 326 51 HOH HOH . 
Q 8 HOH B 27 327 58 HOH HOH . 
Q 8 HOH B 28 328 62 HOH HOH . 
Q 8 HOH B 29 329 64 HOH HOH . 
Q 8 HOH B 30 330 65 HOH HOH . 
Q 8 HOH B 31 331 69 HOH HOH . 
Q 8 HOH B 32 332 70 HOH HOH . 
Q 8 HOH B 33 333 72 HOH HOH . 
Q 8 HOH B 34 334 74 HOH HOH . 
Q 8 HOH B 35 335 75 HOH HOH . 
Q 8 HOH B 36 336 76 HOH HOH . 
Q 8 HOH B 37 337 78 HOH HOH . 
Q 8 HOH B 38 338 79 HOH HOH . 
Q 8 HOH B 39 339 81 HOH HOH . 
Q 8 HOH B 40 340 82 HOH HOH . 
Q 8 HOH B 41 341 83 HOH HOH . 
Q 8 HOH B 42 342 84 HOH HOH . 
Q 8 HOH B 43 343 88 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OH2 1PE . . . G 4 28.146 23.147 19.197 1 51.23 ? OH2 1PE 205 A 1 
HETATM 2 C C12 1PE . . . G 4 28.407 23.27 17.82 1 51.13 ? C12 1PE 205 A 1 
HETATM 3 C C22 1PE . . . G 4 27.289 24.026 17.097 1 48.51 ? C22 1PE 205 A 1 
HETATM 4 O OH3 1PE . . . G 4 27.843 24.692 15.993 1 58.68 ? OH3 1PE 205 A 1 
HETATM 5 C C13 1PE . . . G 4 28.271 26.727 14.759 1 55.38 ? C13 1PE 205 A 1 
HETATM 6 C C23 1PE . . . G 4 27.393 26.01 15.788 1 57.99 ? C23 1PE 205 A 1 
HETATM 7 O OH4 1PE . . . G 4 27.533 27.762 14.161 1 61.62 ? OH4 1PE 205 A 1 
HETATM 8 C C14 1PE . . . G 4 28.549 29.955 14.123 1 50.29 ? C14 1PE 205 A 1 
HETATM 9 C C24 1PE . . . G 4 28.269 28.658 13.362 1 58.09 ? C24 1PE 205 A 1 
HETATM 10 O OH5 1PE . . . G 4 28.238 31.047 13.309 1 42.27 ? OH5 1PE 205 A 1 
HETATM 11 C C15 1PE . . . G 4 27.188 32.304 15.141 1 52.73 ? C15 1PE 205 A 1 
HETATM 12 C C25 1PE . . . G 4 27.082 31.754 13.707 1 48.84 ? C25 1PE 205 A 1 
HETATM 13 O OH6 1PE . . . G 4 26.031 33.009 15.561 1 53.61 ? OH6 1PE 205 A 1 
HETATM 14 C C16 1PE . . . G 4 24.259 33.423 17.181 1 44.26 ? C16 1PE 205 A 1 
HETATM 15 C C26 1PE . . . G 4 25.527 32.643 16.824 1 46.07 ? C26 1PE 205 A 1 
HETATM 16 O OH7 1PE . . . G 4 23.215 32.533 17.506 1 40.86 ? OH7 1PE 205 A 1 
#
_model_server_stats.io_time_ms              69 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           293 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           16 
#