data_4RKP # _model_server_result.job_id PZl2RsebATkhinBUKW0tSQ _model_server_result.datetime_utc '2024-12-05 00:35:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rkp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":405}' # _entry.id 4RKP # _exptl.entry_id 4RKP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 123.72 _cell.angle_gamma 90 _cell.entry_id 4RKP _cell.length_a 150.49 _cell.length_b 62.49 _cell.length_c 103.19 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RKP _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,M 1 1 B,H,I,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 L N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 62 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 43 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 62 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 43 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id A _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id A _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.047 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 4RKP _atom_sites.fract_transf_matrix[1][1] 0.006645 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004435 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016003 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011651 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 401 2 SO4 SO4 . D 2 SO4 A 1 402 7 SO4 SO4 . E 2 SO4 A 1 403 9 SO4 SO4 . F 3 ACT A 1 404 1 ACT ACT . G 3 ACT A 1 405 2 ACT ACT . H 2 SO4 B 1 401 1 SO4 SO4 . I 2 SO4 B 1 402 5 SO4 SO4 . J 2 SO4 B 1 403 6 SO4 SO4 . K 2 SO4 B 1 404 8 SO4 SO4 . L 3 ACT B 1 405 3 ACT ACT . M 4 HOH A 1 501 1 HOH HOH . M 4 HOH A 2 502 2 HOH HOH . M 4 HOH A 3 503 3 HOH HOH . M 4 HOH A 4 504 4 HOH HOH . M 4 HOH A 5 505 5 HOH HOH . M 4 HOH A 6 506 6 HOH HOH . M 4 HOH A 7 507 7 HOH HOH . M 4 HOH A 8 508 8 HOH HOH . M 4 HOH A 9 509 10 HOH HOH . M 4 HOH A 10 510 13 HOH HOH . M 4 HOH A 11 511 14 HOH HOH . M 4 HOH A 12 512 15 HOH HOH . M 4 HOH A 13 513 16 HOH HOH . M 4 HOH A 14 514 17 HOH HOH . M 4 HOH A 15 515 18 HOH HOH . M 4 HOH A 16 516 19 HOH HOH . M 4 HOH A 17 517 21 HOH HOH . M 4 HOH A 18 518 22 HOH HOH . M 4 HOH A 19 519 24 HOH HOH . M 4 HOH A 20 520 25 HOH HOH . M 4 HOH A 21 521 26 HOH HOH . M 4 HOH A 22 522 27 HOH HOH . M 4 HOH A 23 523 28 HOH HOH . M 4 HOH A 24 524 29 HOH HOH . M 4 HOH A 25 525 31 HOH HOH . M 4 HOH A 26 526 32 HOH HOH . M 4 HOH A 27 527 35 HOH HOH . M 4 HOH A 28 528 36 HOH HOH . M 4 HOH A 29 529 37 HOH HOH . M 4 HOH A 30 530 38 HOH HOH . M 4 HOH A 31 531 40 HOH HOH . M 4 HOH A 32 532 42 HOH HOH . M 4 HOH A 33 533 43 HOH HOH . M 4 HOH A 34 534 46 HOH HOH . M 4 HOH A 35 535 47 HOH HOH . M 4 HOH A 36 536 48 HOH HOH . M 4 HOH A 37 537 50 HOH HOH . M 4 HOH A 38 538 52 HOH HOH . M 4 HOH A 39 539 54 HOH HOH . M 4 HOH A 40 540 55 HOH HOH . M 4 HOH A 41 541 57 HOH HOH . M 4 HOH A 42 542 58 HOH HOH . M 4 HOH A 43 543 59 HOH HOH . M 4 HOH A 44 544 62 HOH HOH . M 4 HOH A 45 545 63 HOH HOH . M 4 HOH A 46 546 64 HOH HOH . M 4 HOH A 47 547 66 HOH HOH . M 4 HOH A 48 548 67 HOH HOH . M 4 HOH A 49 549 70 HOH HOH . M 4 HOH A 50 550 74 HOH HOH . M 4 HOH A 51 551 75 HOH HOH . M 4 HOH A 52 552 76 HOH HOH . M 4 HOH A 53 553 79 HOH HOH . M 4 HOH A 54 554 81 HOH HOH . M 4 HOH A 55 555 83 HOH HOH . M 4 HOH A 56 556 85 HOH HOH . M 4 HOH A 57 557 88 HOH HOH . M 4 HOH A 58 558 89 HOH HOH . M 4 HOH A 59 559 91 HOH HOH . M 4 HOH A 60 560 93 HOH HOH . M 4 HOH A 61 561 94 HOH HOH . M 4 HOH A 62 562 96 HOH HOH . M 4 HOH A 63 563 97 HOH HOH . M 4 HOH A 64 564 99 HOH HOH . M 4 HOH A 65 565 100 HOH HOH . M 4 HOH A 66 566 101 HOH HOH . M 4 HOH A 67 567 103 HOH HOH . M 4 HOH A 68 568 105 HOH HOH . M 4 HOH A 69 569 106 HOH HOH . M 4 HOH A 70 570 107 HOH HOH . M 4 HOH A 71 571 108 HOH HOH . M 4 HOH A 72 572 110 HOH HOH . M 4 HOH A 73 573 114 HOH HOH . M 4 HOH A 74 574 117 HOH HOH . M 4 HOH A 75 575 121 HOH HOH . M 4 HOH A 76 576 122 HOH HOH . M 4 HOH A 77 577 123 HOH HOH . M 4 HOH A 78 578 125 HOH HOH . M 4 HOH A 79 579 126 HOH HOH . M 4 HOH A 80 580 128 HOH HOH . M 4 HOH A 81 581 129 HOH HOH . M 4 HOH A 82 582 130 HOH HOH . M 4 HOH A 83 583 131 HOH HOH . M 4 HOH A 84 584 132 HOH HOH . M 4 HOH A 85 585 134 HOH HOH . M 4 HOH A 86 586 137 HOH HOH . M 4 HOH A 87 587 138 HOH HOH . M 4 HOH A 88 588 139 HOH HOH . M 4 HOH A 89 589 140 HOH HOH . M 4 HOH A 90 590 141 HOH HOH . M 4 HOH A 91 591 142 HOH HOH . M 4 HOH A 92 592 144 HOH HOH . M 4 HOH A 93 593 147 HOH HOH . M 4 HOH A 94 594 148 HOH HOH . M 4 HOH A 95 595 150 HOH HOH . M 4 HOH A 96 596 152 HOH HOH . M 4 HOH A 97 597 155 HOH HOH . M 4 HOH A 98 598 156 HOH HOH . M 4 HOH A 99 599 157 HOH HOH . M 4 HOH A 100 600 158 HOH HOH . M 4 HOH A 101 601 160 HOH HOH . M 4 HOH A 102 602 162 HOH HOH . M 4 HOH A 103 603 166 HOH HOH . M 4 HOH A 104 604 167 HOH HOH . M 4 HOH A 105 605 169 HOH HOH . M 4 HOH A 106 606 172 HOH HOH . M 4 HOH A 107 607 173 HOH HOH . M 4 HOH A 108 608 176 HOH HOH . M 4 HOH A 109 609 178 HOH HOH . M 4 HOH A 110 610 179 HOH HOH . M 4 HOH A 111 611 180 HOH HOH . M 4 HOH A 112 612 181 HOH HOH . N 4 HOH B 1 501 9 HOH HOH . N 4 HOH B 2 502 11 HOH HOH . N 4 HOH B 3 503 12 HOH HOH . N 4 HOH B 4 504 20 HOH HOH . N 4 HOH B 5 505 23 HOH HOH . N 4 HOH B 6 506 30 HOH HOH . N 4 HOH B 7 507 33 HOH HOH . N 4 HOH B 8 508 34 HOH HOH . N 4 HOH B 9 509 39 HOH HOH . N 4 HOH B 10 510 41 HOH HOH . N 4 HOH B 11 511 44 HOH HOH . N 4 HOH B 12 512 45 HOH HOH . N 4 HOH B 13 513 49 HOH HOH . N 4 HOH B 14 514 51 HOH HOH . N 4 HOH B 15 515 56 HOH HOH . N 4 HOH B 16 516 60 HOH HOH . N 4 HOH B 17 517 61 HOH HOH . N 4 HOH B 18 518 65 HOH HOH . N 4 HOH B 19 519 68 HOH HOH . N 4 HOH B 20 520 69 HOH HOH . N 4 HOH B 21 521 71 HOH HOH . N 4 HOH B 22 522 72 HOH HOH . N 4 HOH B 23 523 73 HOH HOH . N 4 HOH B 24 524 77 HOH HOH . N 4 HOH B 25 525 78 HOH HOH . N 4 HOH B 26 526 80 HOH HOH . N 4 HOH B 27 527 82 HOH HOH . N 4 HOH B 28 528 84 HOH HOH . N 4 HOH B 29 529 86 HOH HOH . N 4 HOH B 30 530 87 HOH HOH . N 4 HOH B 31 531 90 HOH HOH . N 4 HOH B 32 532 92 HOH HOH . N 4 HOH B 33 533 95 HOH HOH . N 4 HOH B 34 534 98 HOH HOH . N 4 HOH B 35 535 102 HOH HOH . N 4 HOH B 36 536 104 HOH HOH . N 4 HOH B 37 537 109 HOH HOH . N 4 HOH B 38 538 111 HOH HOH . N 4 HOH B 39 539 112 HOH HOH . N 4 HOH B 40 540 113 HOH HOH . N 4 HOH B 41 541 115 HOH HOH . N 4 HOH B 42 542 116 HOH HOH . N 4 HOH B 43 543 118 HOH HOH . N 4 HOH B 44 544 119 HOH HOH . N 4 HOH B 45 545 120 HOH HOH . N 4 HOH B 46 546 124 HOH HOH . N 4 HOH B 47 547 127 HOH HOH . N 4 HOH B 48 548 133 HOH HOH . N 4 HOH B 49 549 135 HOH HOH . N 4 HOH B 50 550 136 HOH HOH . N 4 HOH B 51 551 143 HOH HOH . N 4 HOH B 52 552 145 HOH HOH . N 4 HOH B 53 553 146 HOH HOH . N 4 HOH B 54 554 149 HOH HOH . N 4 HOH B 55 555 151 HOH HOH . N 4 HOH B 56 556 153 HOH HOH . N 4 HOH B 57 557 154 HOH HOH . N 4 HOH B 58 558 159 HOH HOH . N 4 HOH B 59 559 161 HOH HOH . N 4 HOH B 60 560 163 HOH HOH . N 4 HOH B 61 561 164 HOH HOH . N 4 HOH B 62 562 165 HOH HOH . N 4 HOH B 63 563 168 HOH HOH . N 4 HOH B 64 564 170 HOH HOH . N 4 HOH B 65 565 171 HOH HOH . N 4 HOH B 66 566 174 HOH HOH . N 4 HOH B 67 567 175 HOH HOH . N 4 HOH B 68 568 177 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . L 3 15.267 5.018 36.74 1 33.8 ? C ACT 405 B 1 HETATM 2 O O ACT . . . L 3 16.264 5.178 35.991 1 34.91 ? O ACT 405 B 1 HETATM 3 O OXT ACT . . . L 3 14.719 6.065 37.208 1 30.77 ? OXT ACT 405 B 1 HETATM 4 C CH3 ACT . . . L 3 14.781 3.632 37.055 1 24.98 ? CH3 ACT 405 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #