data_4RLO # _model_server_result.job_id MxW5HJvc-I2AvckVfiwEUg _model_server_result.datetime_utc '2024-10-19 03:45:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rlo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":408}' # _entry.id 4RLO # _exptl.entry_id 4RLO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.02 _cell.angle_gamma 90 _cell.entry_id 4RLO _cell.length_a 78.515 _cell.length_b 62.882 _cell.length_c 86.718 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RLO _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,Q 1 1 B,I,J,K,L,M,N,O,P,R 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id P _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 150 n n S C1 DMS sing 151 n n S C2 DMS sing 152 n n C1 H11 DMS sing 153 n n C1 H12 DMS sing 154 n n C1 H13 DMS sing 155 n n C2 H21 DMS sing 156 n n C2 H22 DMS sing 157 n n C2 H23 DMS sing 158 n n # _atom_sites.entry_id 4RLO _atom_sites.fract_transf_matrix[1][1] 0.012736 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000895 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015903 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01156 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 3T3 A 1 401 400 3T3 3T3 . D 3 GOL A 1 402 101 GOL GOL . E 4 CL A 1 403 202 CL CL . F 4 CL A 1 404 203 CL CL . G 4 CL A 1 405 205 CL CL . H 5 SO4 A 1 406 301 SO4 SO4 . I 6 STU B 1 401 401 STU STU . J 3 GOL B 1 402 102 GOL GOL . K 3 GOL B 1 403 103 GOL GOL . L 4 CL B 1 404 201 CL CL . M 4 CL B 1 405 204 CL CL . N 4 CL B 1 406 206 CL CL . O 5 SO4 B 1 407 302 SO4 SO4 . P 7 DMS B 1 408 501 DMS DMS . Q 8 HOH A 1 501 1 HOH HOH . Q 8 HOH A 2 502 2 HOH HOH . Q 8 HOH A 3 503 3 HOH HOH . Q 8 HOH A 4 504 4 HOH HOH . Q 8 HOH A 5 505 8 HOH HOH . Q 8 HOH A 6 506 9 HOH HOH . Q 8 HOH A 7 507 10 HOH HOH . Q 8 HOH A 8 508 11 HOH HOH . Q 8 HOH A 9 509 13 HOH HOH . Q 8 HOH A 10 510 15 HOH HOH . Q 8 HOH A 11 511 19 HOH HOH . Q 8 HOH A 12 512 20 HOH HOH . Q 8 HOH A 13 513 21 HOH HOH . Q 8 HOH A 14 514 28 HOH HOH . Q 8 HOH A 15 515 31 HOH HOH . Q 8 HOH A 16 516 36 HOH HOH . Q 8 HOH A 17 517 42 HOH HOH . Q 8 HOH A 18 518 43 HOH HOH . Q 8 HOH A 19 519 45 HOH HOH . Q 8 HOH A 20 520 48 HOH HOH . Q 8 HOH A 21 521 50 HOH HOH . Q 8 HOH A 22 522 53 HOH HOH . Q 8 HOH A 23 523 55 HOH HOH . Q 8 HOH A 24 524 57 HOH HOH . Q 8 HOH A 25 525 58 HOH HOH . Q 8 HOH A 26 526 70 HOH HOH . Q 8 HOH A 27 527 71 HOH HOH . Q 8 HOH A 28 528 72 HOH HOH . Q 8 HOH A 29 529 73 HOH HOH . Q 8 HOH A 30 530 75 HOH HOH . Q 8 HOH A 31 531 76 HOH HOH . Q 8 HOH A 32 532 77 HOH HOH . Q 8 HOH A 33 533 79 HOH HOH . Q 8 HOH A 34 534 80 HOH HOH . Q 8 HOH A 35 535 83 HOH HOH . Q 8 HOH A 36 536 84 HOH HOH . R 8 HOH B 1 501 5 HOH HOH . R 8 HOH B 2 502 6 HOH HOH . R 8 HOH B 3 503 7 HOH HOH . R 8 HOH B 4 504 12 HOH HOH . R 8 HOH B 5 505 14 HOH HOH . R 8 HOH B 6 506 16 HOH HOH . R 8 HOH B 7 507 17 HOH HOH . R 8 HOH B 8 508 18 HOH HOH . R 8 HOH B 9 509 22 HOH HOH . R 8 HOH B 10 510 23 HOH HOH . R 8 HOH B 11 511 24 HOH HOH . R 8 HOH B 12 512 25 HOH HOH . R 8 HOH B 13 513 26 HOH HOH . R 8 HOH B 14 514 27 HOH HOH . R 8 HOH B 15 515 29 HOH HOH . R 8 HOH B 16 516 30 HOH HOH . R 8 HOH B 17 517 32 HOH HOH . R 8 HOH B 18 518 33 HOH HOH . R 8 HOH B 19 519 34 HOH HOH . R 8 HOH B 20 520 35 HOH HOH . R 8 HOH B 21 521 37 HOH HOH . R 8 HOH B 22 522 39 HOH HOH . R 8 HOH B 23 523 40 HOH HOH . R 8 HOH B 24 524 41 HOH HOH . R 8 HOH B 25 525 44 HOH HOH . R 8 HOH B 26 526 47 HOH HOH . R 8 HOH B 27 527 49 HOH HOH . R 8 HOH B 28 528 51 HOH HOH . R 8 HOH B 29 529 52 HOH HOH . R 8 HOH B 30 530 56 HOH HOH . R 8 HOH B 31 531 59 HOH HOH . R 8 HOH B 32 532 60 HOH HOH . R 8 HOH B 33 533 61 HOH HOH . R 8 HOH B 34 534 62 HOH HOH . R 8 HOH B 35 535 63 HOH HOH . R 8 HOH B 36 536 64 HOH HOH . R 8 HOH B 37 537 65 HOH HOH . R 8 HOH B 38 538 66 HOH HOH . R 8 HOH B 39 539 67 HOH HOH . R 8 HOH B 40 540 68 HOH HOH . R 8 HOH B 41 541 69 HOH HOH . R 8 HOH B 42 542 74 HOH HOH . R 8 HOH B 43 543 78 HOH HOH . R 8 HOH B 44 544 81 HOH HOH . R 8 HOH B 45 545 82 HOH HOH . R 8 HOH B 46 546 85 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . P 7 117.35 -22.054 49.834 1 76.91 ? S DMS 408 B 1 HETATM 2 O O DMS . . . P 7 117.186 -23.458 49.333 1 48.14 ? O DMS 408 B 1 HETATM 3 C C1 DMS . . . P 7 118.619 -21.978 51.134 1 51.27 ? C1 DMS 408 B 1 HETATM 4 C C2 DMS . . . P 7 118.099 -21.012 48.547 1 51.61 ? C2 DMS 408 B 1 HETATM 5 H H11 DMS . . . P 7 118.293 -22.528 51.978 1 61.53 ? H11 DMS 408 B 1 HETATM 6 H H12 DMS . . . P 7 118.781 -20.969 51.411 1 61.53 ? H12 DMS 408 B 1 HETATM 7 H H13 DMS . . . P 7 119.523 -22.393 50.77 1 61.53 ? H13 DMS 408 B 1 HETATM 8 H H21 DMS . . . P 7 119.009 -21.448 48.224 1 61.93 ? H21 DMS 408 B 1 HETATM 9 H H22 DMS . . . P 7 118.29 -20.048 48.94 1 61.93 ? H22 DMS 408 B 1 HETATM 10 H H23 DMS . . . P 7 117.435 -20.933 47.726 1 61.93 ? H23 DMS 408 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 353 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #