data_4RLT # _model_server_result.job_id irSiirOAPeFlFlAaPVBLHQ _model_server_result.datetime_utc '2024-11-30 06:30:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rlt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 4RLT # _exptl.entry_id 4RLT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4RLT _cell.length_a 82.258 _cell.length_b 82.258 _cell.length_c 140.161 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RLT _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1,2 A,B,C,D,E,F,G 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0 -1 0 -1 0 0 0 0 -1 0 0 -70.0805 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 162 n n C1 C2 GOL sing 163 n n C1 H11 GOL sing 164 n n C1 H12 GOL sing 165 n n O1 HO1 GOL sing 166 n n C2 O2 GOL sing 167 n n C2 C3 GOL sing 168 n n C2 H2 GOL sing 169 n n O2 HO2 GOL sing 170 n n C3 O3 GOL sing 171 n n C3 H31 GOL sing 172 n n C3 H32 GOL sing 173 n n O3 HO3 GOL sing 174 n n # _atom_sites.entry_id 4RLT _atom_sites.fract_transf_matrix[1][1] 0.012157 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012157 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007135 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 FSE A 1 201 1 FSE FSE . D 4 GOL A 1 202 1 GOL GOL . E 4 GOL B 1 201 2 GOL GOL . F 5 HOH A 1 301 1 HOH HOH . F 5 HOH A 2 302 2 HOH HOH . F 5 HOH A 3 303 3 HOH HOH . F 5 HOH A 4 304 4 HOH HOH . F 5 HOH A 5 305 5 HOH HOH . F 5 HOH A 6 306 7 HOH HOH . F 5 HOH A 7 307 13 HOH HOH . F 5 HOH A 8 308 14 HOH HOH . F 5 HOH A 9 309 15 HOH HOH . F 5 HOH A 10 310 17 HOH HOH . F 5 HOH A 11 311 19 HOH HOH . F 5 HOH A 12 312 20 HOH HOH . F 5 HOH A 13 313 21 HOH HOH . F 5 HOH A 14 314 23 HOH HOH . F 5 HOH A 15 315 24 HOH HOH . F 5 HOH A 16 316 25 HOH HOH . F 5 HOH A 17 317 28 HOH HOH . F 5 HOH A 18 318 29 HOH HOH . F 5 HOH A 19 319 32 HOH HOH . F 5 HOH A 20 320 33 HOH HOH . F 5 HOH A 21 321 34 HOH HOH . F 5 HOH A 22 322 35 HOH HOH . F 5 HOH A 23 323 37 HOH HOH . F 5 HOH A 24 324 41 HOH HOH . F 5 HOH A 25 325 45 HOH HOH . F 5 HOH A 26 326 48 HOH HOH . F 5 HOH A 27 327 49 HOH HOH . F 5 HOH A 28 328 51 HOH HOH . F 5 HOH A 29 329 52 HOH HOH . F 5 HOH A 30 330 53 HOH HOH . F 5 HOH A 31 331 54 HOH HOH . F 5 HOH A 32 332 56 HOH HOH . F 5 HOH A 33 333 58 HOH HOH . F 5 HOH A 34 334 63 HOH HOH . F 5 HOH A 35 335 64 HOH HOH . F 5 HOH A 36 336 65 HOH HOH . F 5 HOH A 37 337 66 HOH HOH . F 5 HOH A 38 338 69 HOH HOH . F 5 HOH A 39 339 70 HOH HOH . F 5 HOH A 40 340 71 HOH HOH . F 5 HOH A 41 341 73 HOH HOH . F 5 HOH A 42 342 74 HOH HOH . F 5 HOH A 43 343 75 HOH HOH . F 5 HOH A 44 344 78 HOH HOH . F 5 HOH A 45 345 81 HOH HOH . F 5 HOH A 46 346 82 HOH HOH . F 5 HOH A 47 347 83 HOH HOH . F 5 HOH A 48 348 85 HOH HOH . F 5 HOH A 49 349 86 HOH HOH . F 5 HOH A 50 350 87 HOH HOH . F 5 HOH A 51 351 88 HOH HOH . F 5 HOH A 52 352 93 HOH HOH . F 5 HOH A 53 353 94 HOH HOH . F 5 HOH A 54 354 97 HOH HOH . F 5 HOH A 55 355 99 HOH HOH . F 5 HOH A 56 356 100 HOH HOH . F 5 HOH A 57 357 102 HOH HOH . F 5 HOH A 58 358 104 HOH HOH . F 5 HOH A 59 359 106 HOH HOH . F 5 HOH A 60 360 109 HOH HOH . F 5 HOH A 61 361 110 HOH HOH . F 5 HOH A 62 362 111 HOH HOH . F 5 HOH A 63 363 114 HOH HOH . F 5 HOH A 64 364 115 HOH HOH . F 5 HOH A 65 365 116 HOH HOH . F 5 HOH A 66 366 118 HOH HOH . F 5 HOH A 67 367 122 HOH HOH . F 5 HOH A 68 368 124 HOH HOH . F 5 HOH A 69 369 125 HOH HOH . F 5 HOH A 70 370 129 HOH HOH . F 5 HOH A 71 371 130 HOH HOH . F 5 HOH A 72 372 135 HOH HOH . F 5 HOH A 73 373 137 HOH HOH . F 5 HOH A 74 374 138 HOH HOH . F 5 HOH A 75 375 140 HOH HOH . F 5 HOH A 76 376 141 HOH HOH . F 5 HOH A 77 377 143 HOH HOH . F 5 HOH A 78 378 146 HOH HOH . F 5 HOH A 79 379 148 HOH HOH . F 5 HOH A 80 380 149 HOH HOH . F 5 HOH A 81 381 152 HOH HOH . F 5 HOH A 82 382 153 HOH HOH . F 5 HOH A 83 383 156 HOH HOH . F 5 HOH A 84 384 158 HOH HOH . F 5 HOH A 85 385 159 HOH HOH . F 5 HOH A 86 386 160 HOH HOH . F 5 HOH A 87 387 162 HOH HOH . F 5 HOH A 88 388 163 HOH HOH . F 5 HOH A 89 389 166 HOH HOH . F 5 HOH A 90 390 167 HOH HOH . F 5 HOH A 91 391 169 HOH HOH . F 5 HOH A 92 392 170 HOH HOH . F 5 HOH A 93 393 171 HOH HOH . F 5 HOH A 94 394 173 HOH HOH . F 5 HOH A 95 395 174 HOH HOH . F 5 HOH A 96 396 175 HOH HOH . F 5 HOH A 97 397 176 HOH HOH . F 5 HOH A 98 398 177 HOH HOH . F 5 HOH A 99 399 178 HOH HOH . F 5 HOH A 100 400 182 HOH HOH . F 5 HOH A 101 401 183 HOH HOH . F 5 HOH A 102 402 184 HOH HOH . F 5 HOH A 103 403 185 HOH HOH . F 5 HOH A 104 404 187 HOH HOH . F 5 HOH A 105 405 189 HOH HOH . F 5 HOH A 106 406 190 HOH HOH . F 5 HOH A 107 407 191 HOH HOH . F 5 HOH A 108 408 194 HOH HOH . F 5 HOH A 109 409 195 HOH HOH . F 5 HOH A 110 410 196 HOH HOH . F 5 HOH A 111 411 197 HOH HOH . F 5 HOH A 112 412 198 HOH HOH . F 5 HOH A 113 413 199 HOH HOH . F 5 HOH A 114 414 200 HOH HOH . F 5 HOH A 115 415 204 HOH HOH . F 5 HOH A 116 416 206 HOH HOH . F 5 HOH A 117 417 207 HOH HOH . F 5 HOH A 118 418 209 HOH HOH . F 5 HOH A 119 419 212 HOH HOH . F 5 HOH A 120 420 215 HOH HOH . F 5 HOH A 121 421 217 HOH HOH . F 5 HOH A 122 422 220 HOH HOH . F 5 HOH A 123 423 221 HOH HOH . F 5 HOH A 124 424 223 HOH HOH . F 5 HOH A 125 425 224 HOH HOH . F 5 HOH A 126 426 226 HOH HOH . F 5 HOH A 127 427 227 HOH HOH . F 5 HOH A 128 428 232 HOH HOH . F 5 HOH A 129 429 233 HOH HOH . F 5 HOH A 130 430 234 HOH HOH . F 5 HOH A 131 431 236 HOH HOH . F 5 HOH A 132 432 238 HOH HOH . F 5 HOH A 133 433 239 HOH HOH . F 5 HOH A 134 434 240 HOH HOH . F 5 HOH A 135 435 241 HOH HOH . F 5 HOH A 136 436 242 HOH HOH . F 5 HOH A 137 437 243 HOH HOH . G 5 HOH B 1 301 6 HOH HOH . G 5 HOH B 2 302 8 HOH HOH . G 5 HOH B 3 303 9 HOH HOH . G 5 HOH B 4 304 10 HOH HOH . G 5 HOH B 5 305 11 HOH HOH . G 5 HOH B 6 306 12 HOH HOH . G 5 HOH B 7 307 16 HOH HOH . G 5 HOH B 8 308 18 HOH HOH . G 5 HOH B 9 309 22 HOH HOH . G 5 HOH B 10 310 26 HOH HOH . G 5 HOH B 11 311 27 HOH HOH . G 5 HOH B 12 312 30 HOH HOH . G 5 HOH B 13 313 31 HOH HOH . G 5 HOH B 14 314 36 HOH HOH . G 5 HOH B 15 315 38 HOH HOH . G 5 HOH B 16 316 39 HOH HOH . G 5 HOH B 17 317 40 HOH HOH . G 5 HOH B 18 318 42 HOH HOH . G 5 HOH B 19 319 43 HOH HOH . G 5 HOH B 20 320 44 HOH HOH . G 5 HOH B 21 321 46 HOH HOH . G 5 HOH B 22 322 47 HOH HOH . G 5 HOH B 23 323 50 HOH HOH . G 5 HOH B 24 324 55 HOH HOH . G 5 HOH B 25 325 57 HOH HOH . G 5 HOH B 26 326 59 HOH HOH . G 5 HOH B 27 327 60 HOH HOH . G 5 HOH B 28 328 61 HOH HOH . G 5 HOH B 29 329 62 HOH HOH . G 5 HOH B 30 330 67 HOH HOH . G 5 HOH B 31 331 68 HOH HOH . G 5 HOH B 32 332 72 HOH HOH . G 5 HOH B 33 333 76 HOH HOH . G 5 HOH B 34 334 77 HOH HOH . G 5 HOH B 35 335 79 HOH HOH . G 5 HOH B 36 336 80 HOH HOH . G 5 HOH B 37 337 84 HOH HOH . G 5 HOH B 38 338 89 HOH HOH . G 5 HOH B 39 339 90 HOH HOH . G 5 HOH B 40 340 91 HOH HOH . G 5 HOH B 41 341 92 HOH HOH . G 5 HOH B 42 342 95 HOH HOH . G 5 HOH B 43 343 96 HOH HOH . G 5 HOH B 44 344 98 HOH HOH . G 5 HOH B 45 345 101 HOH HOH . G 5 HOH B 46 346 103 HOH HOH . G 5 HOH B 47 347 105 HOH HOH . G 5 HOH B 48 348 107 HOH HOH . G 5 HOH B 49 349 108 HOH HOH . G 5 HOH B 50 350 112 HOH HOH . G 5 HOH B 51 351 113 HOH HOH . G 5 HOH B 52 352 117 HOH HOH . G 5 HOH B 53 353 119 HOH HOH . G 5 HOH B 54 354 120 HOH HOH . G 5 HOH B 55 355 121 HOH HOH . G 5 HOH B 56 356 123 HOH HOH . G 5 HOH B 57 357 126 HOH HOH . G 5 HOH B 58 358 127 HOH HOH . G 5 HOH B 59 359 128 HOH HOH . G 5 HOH B 60 360 131 HOH HOH . G 5 HOH B 61 361 132 HOH HOH . G 5 HOH B 62 362 133 HOH HOH . G 5 HOH B 63 363 134 HOH HOH . G 5 HOH B 64 364 136 HOH HOH . G 5 HOH B 65 365 139 HOH HOH . G 5 HOH B 66 366 142 HOH HOH . G 5 HOH B 67 367 144 HOH HOH . G 5 HOH B 68 368 145 HOH HOH . G 5 HOH B 69 369 147 HOH HOH . G 5 HOH B 70 370 150 HOH HOH . G 5 HOH B 71 371 151 HOH HOH . G 5 HOH B 72 372 154 HOH HOH . G 5 HOH B 73 373 155 HOH HOH . G 5 HOH B 74 374 157 HOH HOH . G 5 HOH B 75 375 161 HOH HOH . G 5 HOH B 76 376 164 HOH HOH . G 5 HOH B 77 377 165 HOH HOH . G 5 HOH B 78 378 168 HOH HOH . G 5 HOH B 79 379 172 HOH HOH . G 5 HOH B 80 380 179 HOH HOH . G 5 HOH B 81 381 180 HOH HOH . G 5 HOH B 82 382 181 HOH HOH . G 5 HOH B 83 383 186 HOH HOH . G 5 HOH B 84 384 188 HOH HOH . G 5 HOH B 85 385 192 HOH HOH . G 5 HOH B 86 386 193 HOH HOH . G 5 HOH B 87 387 201 HOH HOH . G 5 HOH B 88 388 202 HOH HOH . G 5 HOH B 89 389 203 HOH HOH . G 5 HOH B 90 390 205 HOH HOH . G 5 HOH B 91 391 208 HOH HOH . G 5 HOH B 92 392 210 HOH HOH . G 5 HOH B 93 393 211 HOH HOH . G 5 HOH B 94 394 213 HOH HOH . G 5 HOH B 95 395 214 HOH HOH . G 5 HOH B 96 396 216 HOH HOH . G 5 HOH B 97 397 218 HOH HOH . G 5 HOH B 98 398 219 HOH HOH . G 5 HOH B 99 399 222 HOH HOH . G 5 HOH B 100 400 225 HOH HOH . G 5 HOH B 101 401 228 HOH HOH . G 5 HOH B 102 402 229 HOH HOH . G 5 HOH B 103 403 230 HOH HOH . G 5 HOH B 104 404 231 HOH HOH . G 5 HOH B 105 405 235 HOH HOH . G 5 HOH B 106 406 237 HOH HOH . G 5 HOH B 107 407 244 HOH HOH . G 5 HOH B 108 408 245 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 4 1.915 25.788 -0.354 1 36.54 ? C1 GOL 201 B 1 HETATM 2 O O1 GOL . . . E 4 2.019 24.785 -1.356 1 31.26 ? O1 GOL 201 B 1 HETATM 3 C C2 GOL . . . E 4 2.145 27.254 -0.773 1 39.8 ? C2 GOL 201 B 1 HETATM 4 O O2 GOL . . . E 4 2.743 27.461 -2.039 1 34.55 ? O2 GOL 201 B 1 HETATM 5 C C3 GOL . . . E 4 2.767 28.034 0.389 1 37.07 ? C3 GOL 201 B 1 HETATM 6 O O3 GOL . . . E 4 3.061 29.362 0.04 1 37.17 ? O3 GOL 201 B 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #