data_4RLU # _model_server_result.job_id Neuhye6NuQeFLUYxmK_ifg _model_server_result.datetime_utc '2024-11-26 18:43:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rlu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":204}' # _entry.id 4RLU # _exptl.entry_id 4RLU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4RLU _cell.length_a 82.376 _cell.length_b 82.376 _cell.length_c 141.509 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RLU _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1,2 A,B,C,D,E,F,G,H 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0 -1 0 -1 0 0 0 0 -1 0 0 -70.7545 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 4RLU _atom_sites.fract_transf_matrix[1][1] 0.012139 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012139 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007067 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HCC A 1 201 1 HCC HCC . D 4 PGE A 1 202 1 PGE PGE . E 4 PGE A 1 203 2 PGE PGE . F 5 GOL A 1 204 3 GOL GOL . G 6 HOH A 1 301 1 HOH HOH . G 6 HOH A 2 302 4 HOH HOH . G 6 HOH A 3 303 5 HOH HOH . G 6 HOH A 4 304 6 HOH HOH . G 6 HOH A 5 305 8 HOH HOH . G 6 HOH A 6 306 9 HOH HOH . G 6 HOH A 7 307 10 HOH HOH . G 6 HOH A 8 308 11 HOH HOH . G 6 HOH A 9 309 13 HOH HOH . G 6 HOH A 10 310 14 HOH HOH . G 6 HOH A 11 311 16 HOH HOH . G 6 HOH A 12 312 18 HOH HOH . G 6 HOH A 13 313 20 HOH HOH . G 6 HOH A 14 314 21 HOH HOH . G 6 HOH A 15 315 22 HOH HOH . G 6 HOH A 16 316 23 HOH HOH . G 6 HOH A 17 317 25 HOH HOH . G 6 HOH A 18 318 26 HOH HOH . G 6 HOH A 19 319 33 HOH HOH . G 6 HOH A 20 320 35 HOH HOH . G 6 HOH A 21 321 36 HOH HOH . G 6 HOH A 22 322 41 HOH HOH . G 6 HOH A 23 323 42 HOH HOH . G 6 HOH A 24 324 44 HOH HOH . G 6 HOH A 25 325 46 HOH HOH . G 6 HOH A 26 326 47 HOH HOH . G 6 HOH A 27 327 49 HOH HOH . G 6 HOH A 28 328 51 HOH HOH . G 6 HOH A 29 329 55 HOH HOH . G 6 HOH A 30 330 56 HOH HOH . G 6 HOH A 31 331 58 HOH HOH . G 6 HOH A 32 332 61 HOH HOH . G 6 HOH A 33 333 62 HOH HOH . G 6 HOH A 34 334 65 HOH HOH . G 6 HOH A 35 335 68 HOH HOH . G 6 HOH A 36 336 70 HOH HOH . G 6 HOH A 37 337 71 HOH HOH . G 6 HOH A 38 338 75 HOH HOH . G 6 HOH A 39 339 76 HOH HOH . G 6 HOH A 40 340 77 HOH HOH . G 6 HOH A 41 341 78 HOH HOH . G 6 HOH A 42 342 80 HOH HOH . G 6 HOH A 43 343 81 HOH HOH . G 6 HOH A 44 344 82 HOH HOH . G 6 HOH A 45 345 83 HOH HOH . G 6 HOH A 46 346 97 HOH HOH . G 6 HOH A 47 347 98 HOH HOH . G 6 HOH A 48 348 100 HOH HOH . G 6 HOH A 49 349 102 HOH HOH . G 6 HOH A 50 350 103 HOH HOH . G 6 HOH A 51 351 104 HOH HOH . G 6 HOH A 52 352 106 HOH HOH . G 6 HOH A 53 353 107 HOH HOH . G 6 HOH A 54 354 108 HOH HOH . G 6 HOH A 55 355 110 HOH HOH . G 6 HOH A 56 356 111 HOH HOH . G 6 HOH A 57 357 114 HOH HOH . G 6 HOH A 58 358 115 HOH HOH . G 6 HOH A 59 359 119 HOH HOH . G 6 HOH A 60 360 120 HOH HOH . G 6 HOH A 61 361 121 HOH HOH . G 6 HOH A 62 362 122 HOH HOH . G 6 HOH A 63 363 123 HOH HOH . G 6 HOH A 64 364 125 HOH HOH . G 6 HOH A 65 365 126 HOH HOH . G 6 HOH A 66 366 127 HOH HOH . G 6 HOH A 67 367 128 HOH HOH . G 6 HOH A 68 368 130 HOH HOH . G 6 HOH A 69 369 131 HOH HOH . G 6 HOH A 70 370 134 HOH HOH . G 6 HOH A 71 371 136 HOH HOH . G 6 HOH A 72 372 138 HOH HOH . G 6 HOH A 73 373 140 HOH HOH . G 6 HOH A 74 374 141 HOH HOH . G 6 HOH A 75 375 143 HOH HOH . G 6 HOH A 76 376 145 HOH HOH . G 6 HOH A 77 377 146 HOH HOH . G 6 HOH A 78 378 149 HOH HOH . H 6 HOH B 1 201 2 HOH HOH . H 6 HOH B 2 202 3 HOH HOH . H 6 HOH B 3 203 7 HOH HOH . H 6 HOH B 4 204 12 HOH HOH . H 6 HOH B 5 205 15 HOH HOH . H 6 HOH B 6 206 17 HOH HOH . H 6 HOH B 7 207 19 HOH HOH . H 6 HOH B 8 208 24 HOH HOH . H 6 HOH B 9 209 27 HOH HOH . H 6 HOH B 10 210 28 HOH HOH . H 6 HOH B 11 211 30 HOH HOH . H 6 HOH B 12 212 31 HOH HOH . H 6 HOH B 13 213 34 HOH HOH . H 6 HOH B 14 214 37 HOH HOH . H 6 HOH B 15 215 38 HOH HOH . H 6 HOH B 16 216 39 HOH HOH . H 6 HOH B 17 217 40 HOH HOH . H 6 HOH B 18 218 43 HOH HOH . H 6 HOH B 19 219 45 HOH HOH . H 6 HOH B 20 220 48 HOH HOH . H 6 HOH B 21 221 50 HOH HOH . H 6 HOH B 22 222 52 HOH HOH . H 6 HOH B 23 223 53 HOH HOH . H 6 HOH B 24 224 54 HOH HOH . H 6 HOH B 25 225 57 HOH HOH . H 6 HOH B 26 226 59 HOH HOH . H 6 HOH B 27 227 60 HOH HOH . H 6 HOH B 28 228 63 HOH HOH . H 6 HOH B 29 229 64 HOH HOH . H 6 HOH B 30 230 66 HOH HOH . H 6 HOH B 31 231 69 HOH HOH . H 6 HOH B 32 232 72 HOH HOH . H 6 HOH B 33 233 73 HOH HOH . H 6 HOH B 34 234 74 HOH HOH . H 6 HOH B 35 235 79 HOH HOH . H 6 HOH B 36 236 84 HOH HOH . H 6 HOH B 37 237 85 HOH HOH . H 6 HOH B 38 238 86 HOH HOH . H 6 HOH B 39 239 87 HOH HOH . H 6 HOH B 40 240 88 HOH HOH . H 6 HOH B 41 241 89 HOH HOH . H 6 HOH B 42 242 90 HOH HOH . H 6 HOH B 43 243 91 HOH HOH . H 6 HOH B 44 244 92 HOH HOH . H 6 HOH B 45 245 93 HOH HOH . H 6 HOH B 46 246 94 HOH HOH . H 6 HOH B 47 247 95 HOH HOH . H 6 HOH B 48 248 96 HOH HOH . H 6 HOH B 49 249 99 HOH HOH . H 6 HOH B 50 250 101 HOH HOH . H 6 HOH B 51 251 105 HOH HOH . H 6 HOH B 52 252 109 HOH HOH . H 6 HOH B 53 253 112 HOH HOH . H 6 HOH B 54 254 113 HOH HOH . H 6 HOH B 55 255 116 HOH HOH . H 6 HOH B 56 256 117 HOH HOH . H 6 HOH B 57 257 118 HOH HOH . H 6 HOH B 58 258 129 HOH HOH . H 6 HOH B 59 259 132 HOH HOH . H 6 HOH B 60 260 133 HOH HOH . H 6 HOH B 61 261 135 HOH HOH . H 6 HOH B 62 262 137 HOH HOH . H 6 HOH B 63 263 139 HOH HOH . H 6 HOH B 64 264 142 HOH HOH . H 6 HOH B 65 265 144 HOH HOH . H 6 HOH B 66 266 147 HOH HOH . H 6 HOH B 67 267 148 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . F 5 -12.869 27.247 -22.044 1 66.34 ? C1 GOL 204 A 1 HETATM 2 O O1 GOL . . . F 5 -12.225 27.195 -20.791 1 68.41 ? O1 GOL 204 A 1 HETATM 3 C C2 GOL . . . F 5 -13.403 25.87 -22.411 1 65.27 ? C2 GOL 204 A 1 HETATM 4 O O2 GOL . . . F 5 -14.812 25.855 -22.315 1 63.42 ? O2 GOL 204 A 1 HETATM 5 C C3 GOL . . . F 5 -12.979 25.51 -23.831 1 66.05 ? C3 GOL 204 A 1 HETATM 6 O O3 GOL . . . F 5 -11.85 24.67 -23.821 1 66.48 ? O3 GOL 204 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #