data_4RMJ # _model_server_result.job_id 4glhtvgDmBiwb_vlcrPM8A _model_server_result.datetime_utc '2024-11-30 05:49:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rmj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 4RMJ # _exptl.entry_id 4RMJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4RMJ _cell.length_a 77.6 _cell.length_b 77.96 _cell.length_c 114.28 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RMJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 118 A ASP 170 1_555 G NA NA . A NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.726 ? metalc ? metalc2 A OE2 GLU 121 A GLU 173 1_555 G NA NA . A NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? metalc ? metalc3 A SG CYS 143 A CYS 195 1_555 H ZN ZN . A ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc4 A SG CYS 148 A CYS 200 1_555 H ZN ZN . A ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc5 A SG CYS 169 A CYS 221 1_555 H ZN ZN . A ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc6 A SG CYS 172 A CYS 224 1_555 H ZN ZN . A ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc7 B SG CYS 143 B CYS 195 1_555 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc8 B SG CYS 148 B CYS 200 1_555 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc9 B SG CYS 169 B CYS 221 1_555 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc10 B SG CYS 172 B CYS 224 1_555 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 323 n n C1 C2 PEG sing 324 n n C1 H11 PEG sing 325 n n C1 H12 PEG sing 326 n n O1 HO1 PEG sing 327 n n C2 O2 PEG sing 328 n n C2 H21 PEG sing 329 n n C2 H22 PEG sing 330 n n O2 C3 PEG sing 331 n n C3 C4 PEG sing 332 n n C3 H31 PEG sing 333 n n C3 H32 PEG sing 334 n n C4 O4 PEG sing 335 n n C4 H41 PEG sing 336 n n C4 H42 PEG sing 337 n n O4 HO4 PEG sing 338 n n # _atom_sites.entry_id 4RMJ _atom_sites.fract_transf_matrix[1][1] 0.012887 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012827 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00875 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AR6 A 1 401 1 AR6 AR6 . D 3 NCA A 1 402 3 NCA NCA . E 4 PEG A 1 403 4 PEG PEG . F 5 EDO A 1 404 7 EDO EDO . G 6 NA A 1 405 9 NA NA . H 7 ZN A 1 406 400 ZN ZN . I 7 ZN B 1 401 400 ZN ZN . J 2 AR6 B 1 402 2 AR6 AR6 . K 5 EDO B 1 403 5 EDO EDO . L 5 EDO B 1 404 6 EDO EDO . M 8 PGE B 1 405 8 PGE PGE . N 9 HOH A 1 501 1 HOH HOH . N 9 HOH A 2 502 2 HOH HOH . N 9 HOH A 3 503 3 HOH HOH . N 9 HOH A 4 504 6 HOH HOH . N 9 HOH A 5 505 7 HOH HOH . N 9 HOH A 6 506 8 HOH HOH . N 9 HOH A 7 507 9 HOH HOH . N 9 HOH A 8 508 10 HOH HOH . N 9 HOH A 9 509 12 HOH HOH . N 9 HOH A 10 510 13 HOH HOH . N 9 HOH A 11 511 15 HOH HOH . N 9 HOH A 12 512 16 HOH HOH . N 9 HOH A 13 513 17 HOH HOH . N 9 HOH A 14 514 18 HOH HOH . N 9 HOH A 15 515 23 HOH HOH . N 9 HOH A 16 516 24 HOH HOH . N 9 HOH A 17 517 25 HOH HOH . N 9 HOH A 18 518 26 HOH HOH . N 9 HOH A 19 519 27 HOH HOH . N 9 HOH A 20 520 31 HOH HOH . N 9 HOH A 21 521 32 HOH HOH . N 9 HOH A 22 522 33 HOH HOH . N 9 HOH A 23 523 34 HOH HOH . N 9 HOH A 24 524 36 HOH HOH . N 9 HOH A 25 525 37 HOH HOH . N 9 HOH A 26 526 38 HOH HOH . N 9 HOH A 27 527 39 HOH HOH . N 9 HOH A 28 528 40 HOH HOH . N 9 HOH A 29 529 41 HOH HOH . N 9 HOH A 30 530 43 HOH HOH . N 9 HOH A 31 531 44 HOH HOH . N 9 HOH A 32 532 48 HOH HOH . N 9 HOH A 33 533 50 HOH HOH . N 9 HOH A 34 534 51 HOH HOH . N 9 HOH A 35 535 54 HOH HOH . N 9 HOH A 36 536 55 HOH HOH . N 9 HOH A 37 537 57 HOH HOH . N 9 HOH A 38 538 59 HOH HOH . N 9 HOH A 39 539 60 HOH HOH . N 9 HOH A 40 540 61 HOH HOH . N 9 HOH A 41 541 62 HOH HOH . N 9 HOH A 42 542 64 HOH HOH . N 9 HOH A 43 543 66 HOH HOH . N 9 HOH A 44 544 68 HOH HOH . N 9 HOH A 45 545 69 HOH HOH . N 9 HOH A 46 546 72 HOH HOH . N 9 HOH A 47 547 76 HOH HOH . N 9 HOH A 48 548 78 HOH HOH . N 9 HOH A 49 549 79 HOH HOH . N 9 HOH A 50 550 83 HOH HOH . N 9 HOH A 51 551 84 HOH HOH . N 9 HOH A 52 552 85 HOH HOH . N 9 HOH A 53 553 87 HOH HOH . N 9 HOH A 54 554 88 HOH HOH . N 9 HOH A 55 555 91 HOH HOH . N 9 HOH A 56 556 92 HOH HOH . N 9 HOH A 57 557 93 HOH HOH . N 9 HOH A 58 558 94 HOH HOH . N 9 HOH A 59 559 96 HOH HOH . N 9 HOH A 60 560 97 HOH HOH . N 9 HOH A 61 561 98 HOH HOH . N 9 HOH A 62 562 99 HOH HOH . N 9 HOH A 63 563 101 HOH HOH . N 9 HOH A 64 564 102 HOH HOH . N 9 HOH A 65 565 104 HOH HOH . N 9 HOH A 66 566 105 HOH HOH . N 9 HOH A 67 567 106 HOH HOH . N 9 HOH A 68 568 107 HOH HOH . N 9 HOH A 69 569 108 HOH HOH . N 9 HOH A 70 570 110 HOH HOH . N 9 HOH A 71 571 112 HOH HOH . N 9 HOH A 72 572 113 HOH HOH . N 9 HOH A 73 573 115 HOH HOH . N 9 HOH A 74 574 116 HOH HOH . N 9 HOH A 75 575 120 HOH HOH . N 9 HOH A 76 576 121 HOH HOH . N 9 HOH A 77 577 122 HOH HOH . N 9 HOH A 78 578 126 HOH HOH . N 9 HOH A 79 579 131 HOH HOH . N 9 HOH A 80 580 132 HOH HOH . N 9 HOH A 81 581 133 HOH HOH . N 9 HOH A 82 582 135 HOH HOH . N 9 HOH A 83 583 137 HOH HOH . N 9 HOH A 84 584 138 HOH HOH . O 9 HOH B 1 501 4 HOH HOH . O 9 HOH B 2 502 5 HOH HOH . O 9 HOH B 3 503 11 HOH HOH . O 9 HOH B 4 504 14 HOH HOH . O 9 HOH B 5 505 19 HOH HOH . O 9 HOH B 6 506 20 HOH HOH . O 9 HOH B 7 507 21 HOH HOH . O 9 HOH B 8 508 22 HOH HOH . O 9 HOH B 9 509 28 HOH HOH . O 9 HOH B 10 510 29 HOH HOH . O 9 HOH B 11 511 30 HOH HOH . O 9 HOH B 12 512 35 HOH HOH . O 9 HOH B 13 513 42 HOH HOH . O 9 HOH B 14 514 45 HOH HOH . O 9 HOH B 15 515 46 HOH HOH . O 9 HOH B 16 516 47 HOH HOH . O 9 HOH B 17 517 49 HOH HOH . O 9 HOH B 18 518 52 HOH HOH . O 9 HOH B 19 519 53 HOH HOH . O 9 HOH B 20 520 56 HOH HOH . O 9 HOH B 21 521 58 HOH HOH . O 9 HOH B 22 522 63 HOH HOH . O 9 HOH B 23 523 65 HOH HOH . O 9 HOH B 24 524 67 HOH HOH . O 9 HOH B 25 525 70 HOH HOH . O 9 HOH B 26 526 71 HOH HOH . O 9 HOH B 27 527 73 HOH HOH . O 9 HOH B 28 528 74 HOH HOH . O 9 HOH B 29 529 75 HOH HOH . O 9 HOH B 30 530 77 HOH HOH . O 9 HOH B 31 531 80 HOH HOH . O 9 HOH B 32 532 81 HOH HOH . O 9 HOH B 33 533 82 HOH HOH . O 9 HOH B 34 534 86 HOH HOH . O 9 HOH B 35 535 89 HOH HOH . O 9 HOH B 36 536 90 HOH HOH . O 9 HOH B 37 537 95 HOH HOH . O 9 HOH B 38 538 100 HOH HOH . O 9 HOH B 39 539 103 HOH HOH . O 9 HOH B 40 540 109 HOH HOH . O 9 HOH B 41 541 111 HOH HOH . O 9 HOH B 42 542 114 HOH HOH . O 9 HOH B 43 543 117 HOH HOH . O 9 HOH B 44 544 118 HOH HOH . O 9 HOH B 45 545 119 HOH HOH . O 9 HOH B 46 546 123 HOH HOH . O 9 HOH B 47 547 124 HOH HOH . O 9 HOH B 48 548 125 HOH HOH . O 9 HOH B 49 549 127 HOH HOH . O 9 HOH B 50 550 128 HOH HOH . O 9 HOH B 51 551 129 HOH HOH . O 9 HOH B 52 552 130 HOH HOH . O 9 HOH B 53 553 134 HOH HOH . O 9 HOH B 54 554 136 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . E 4 -12.04 -33.924 -34.007 1 55.16 ? C1 PEG 403 A 1 HETATM 2 O O1 PEG . . . E 4 -12.781 -33.383 -32.904 1 48.42 ? O1 PEG 403 A 1 HETATM 3 C C2 PEG . . . E 4 -10.794 -33.086 -34.274 1 53.97 ? C2 PEG 403 A 1 HETATM 4 O O2 PEG . . . E 4 -9.725 -33.572 -33.454 1 56.51 ? O2 PEG 403 A 1 HETATM 5 C C3 PEG . . . E 4 -8.561 -32.731 -33.491 1 51 ? C3 PEG 403 A 1 HETATM 6 C C4 PEG . . . E 4 -7.437 -33.519 -34.174 1 55.65 ? C4 PEG 403 A 1 HETATM 7 O O4 PEG . . . E 4 -6.532 -32.68 -34.908 1 49.61 ? O4 PEG 403 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 7 #