data_4RMJ
#
_model_server_result.job_id            tnavbvpJ7RoRlLLIr09siA 
_model_server_result.datetime_utc      '2024-10-11 02:18:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4rmj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":403}' 
#
_entry.id    4RMJ 
#
_exptl.entry_id    4RMJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4RMJ 
_cell.length_a            77.6 
_cell.length_b            77.96 
_cell.length_c            114.28 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4RMJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 F N N 
? 5 K N N 
? 5 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 118 A ASP 170 1_555 G NA NA . A NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.726 ? 
metalc ? metalc2 A OE2 GLU 121 A GLU 173 1_555 G NA NA . A NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? 
metalc ? metalc3 A SG CYS 143 A CYS 195 1_555 H ZN ZN . A ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? 
metalc ? metalc4 A SG CYS 148 A CYS 200 1_555 H ZN ZN . A ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? 
metalc ? metalc5 A SG CYS 169 A CYS 221 1_555 H ZN ZN . A ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? 
metalc ? metalc6 A SG CYS 172 A CYS 224 1_555 H ZN ZN . A ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? 
metalc ? metalc7 B SG CYS 143 B CYS 195 1_555 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? 
metalc ? metalc8 B SG CYS 148 B CYS 200 1_555 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? 
metalc ? metalc9 B SG CYS 169 B CYS 221 1_555 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? 
metalc ? metalc10 B SG CYS 172 B CYS 224 1_555 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 145 n n 
C1 C2 EDO sing 146 n n 
C1 H11 EDO sing 147 n n 
C1 H12 EDO sing 148 n n 
O1 HO1 EDO sing 149 n n 
C2 O2 EDO sing 150 n n 
C2 H21 EDO sing 151 n n 
C2 H22 EDO sing 152 n n 
O2 HO2 EDO sing 153 n n 
#
_atom_sites.entry_id                     4RMJ 
_atom_sites.fract_transf_matrix[1][1]    0.012887 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012827 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00875 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 AR6 A 1 401 1 AR6 AR6 . 
D 3 NCA A 1 402 3 NCA NCA . 
E 4 PEG A 1 403 4 PEG PEG . 
F 5 EDO A 1 404 7 EDO EDO . 
G 6 NA A 1 405 9 NA NA . 
H 7 ZN A 1 406 400 ZN ZN . 
I 7 ZN B 1 401 400 ZN ZN . 
J 2 AR6 B 1 402 2 AR6 AR6 . 
K 5 EDO B 1 403 5 EDO EDO . 
L 5 EDO B 1 404 6 EDO EDO . 
M 8 PGE B 1 405 8 PGE PGE . 
N 9 HOH A 1 501 1 HOH HOH . 
N 9 HOH A 2 502 2 HOH HOH . 
N 9 HOH A 3 503 3 HOH HOH . 
N 9 HOH A 4 504 6 HOH HOH . 
N 9 HOH A 5 505 7 HOH HOH . 
N 9 HOH A 6 506 8 HOH HOH . 
N 9 HOH A 7 507 9 HOH HOH . 
N 9 HOH A 8 508 10 HOH HOH . 
N 9 HOH A 9 509 12 HOH HOH . 
N 9 HOH A 10 510 13 HOH HOH . 
N 9 HOH A 11 511 15 HOH HOH . 
N 9 HOH A 12 512 16 HOH HOH . 
N 9 HOH A 13 513 17 HOH HOH . 
N 9 HOH A 14 514 18 HOH HOH . 
N 9 HOH A 15 515 23 HOH HOH . 
N 9 HOH A 16 516 24 HOH HOH . 
N 9 HOH A 17 517 25 HOH HOH . 
N 9 HOH A 18 518 26 HOH HOH . 
N 9 HOH A 19 519 27 HOH HOH . 
N 9 HOH A 20 520 31 HOH HOH . 
N 9 HOH A 21 521 32 HOH HOH . 
N 9 HOH A 22 522 33 HOH HOH . 
N 9 HOH A 23 523 34 HOH HOH . 
N 9 HOH A 24 524 36 HOH HOH . 
N 9 HOH A 25 525 37 HOH HOH . 
N 9 HOH A 26 526 38 HOH HOH . 
N 9 HOH A 27 527 39 HOH HOH . 
N 9 HOH A 28 528 40 HOH HOH . 
N 9 HOH A 29 529 41 HOH HOH . 
N 9 HOH A 30 530 43 HOH HOH . 
N 9 HOH A 31 531 44 HOH HOH . 
N 9 HOH A 32 532 48 HOH HOH . 
N 9 HOH A 33 533 50 HOH HOH . 
N 9 HOH A 34 534 51 HOH HOH . 
N 9 HOH A 35 535 54 HOH HOH . 
N 9 HOH A 36 536 55 HOH HOH . 
N 9 HOH A 37 537 57 HOH HOH . 
N 9 HOH A 38 538 59 HOH HOH . 
N 9 HOH A 39 539 60 HOH HOH . 
N 9 HOH A 40 540 61 HOH HOH . 
N 9 HOH A 41 541 62 HOH HOH . 
N 9 HOH A 42 542 64 HOH HOH . 
N 9 HOH A 43 543 66 HOH HOH . 
N 9 HOH A 44 544 68 HOH HOH . 
N 9 HOH A 45 545 69 HOH HOH . 
N 9 HOH A 46 546 72 HOH HOH . 
N 9 HOH A 47 547 76 HOH HOH . 
N 9 HOH A 48 548 78 HOH HOH . 
N 9 HOH A 49 549 79 HOH HOH . 
N 9 HOH A 50 550 83 HOH HOH . 
N 9 HOH A 51 551 84 HOH HOH . 
N 9 HOH A 52 552 85 HOH HOH . 
N 9 HOH A 53 553 87 HOH HOH . 
N 9 HOH A 54 554 88 HOH HOH . 
N 9 HOH A 55 555 91 HOH HOH . 
N 9 HOH A 56 556 92 HOH HOH . 
N 9 HOH A 57 557 93 HOH HOH . 
N 9 HOH A 58 558 94 HOH HOH . 
N 9 HOH A 59 559 96 HOH HOH . 
N 9 HOH A 60 560 97 HOH HOH . 
N 9 HOH A 61 561 98 HOH HOH . 
N 9 HOH A 62 562 99 HOH HOH . 
N 9 HOH A 63 563 101 HOH HOH . 
N 9 HOH A 64 564 102 HOH HOH . 
N 9 HOH A 65 565 104 HOH HOH . 
N 9 HOH A 66 566 105 HOH HOH . 
N 9 HOH A 67 567 106 HOH HOH . 
N 9 HOH A 68 568 107 HOH HOH . 
N 9 HOH A 69 569 108 HOH HOH . 
N 9 HOH A 70 570 110 HOH HOH . 
N 9 HOH A 71 571 112 HOH HOH . 
N 9 HOH A 72 572 113 HOH HOH . 
N 9 HOH A 73 573 115 HOH HOH . 
N 9 HOH A 74 574 116 HOH HOH . 
N 9 HOH A 75 575 120 HOH HOH . 
N 9 HOH A 76 576 121 HOH HOH . 
N 9 HOH A 77 577 122 HOH HOH . 
N 9 HOH A 78 578 126 HOH HOH . 
N 9 HOH A 79 579 131 HOH HOH . 
N 9 HOH A 80 580 132 HOH HOH . 
N 9 HOH A 81 581 133 HOH HOH . 
N 9 HOH A 82 582 135 HOH HOH . 
N 9 HOH A 83 583 137 HOH HOH . 
N 9 HOH A 84 584 138 HOH HOH . 
O 9 HOH B 1 501 4 HOH HOH . 
O 9 HOH B 2 502 5 HOH HOH . 
O 9 HOH B 3 503 11 HOH HOH . 
O 9 HOH B 4 504 14 HOH HOH . 
O 9 HOH B 5 505 19 HOH HOH . 
O 9 HOH B 6 506 20 HOH HOH . 
O 9 HOH B 7 507 21 HOH HOH . 
O 9 HOH B 8 508 22 HOH HOH . 
O 9 HOH B 9 509 28 HOH HOH . 
O 9 HOH B 10 510 29 HOH HOH . 
O 9 HOH B 11 511 30 HOH HOH . 
O 9 HOH B 12 512 35 HOH HOH . 
O 9 HOH B 13 513 42 HOH HOH . 
O 9 HOH B 14 514 45 HOH HOH . 
O 9 HOH B 15 515 46 HOH HOH . 
O 9 HOH B 16 516 47 HOH HOH . 
O 9 HOH B 17 517 49 HOH HOH . 
O 9 HOH B 18 518 52 HOH HOH . 
O 9 HOH B 19 519 53 HOH HOH . 
O 9 HOH B 20 520 56 HOH HOH . 
O 9 HOH B 21 521 58 HOH HOH . 
O 9 HOH B 22 522 63 HOH HOH . 
O 9 HOH B 23 523 65 HOH HOH . 
O 9 HOH B 24 524 67 HOH HOH . 
O 9 HOH B 25 525 70 HOH HOH . 
O 9 HOH B 26 526 71 HOH HOH . 
O 9 HOH B 27 527 73 HOH HOH . 
O 9 HOH B 28 528 74 HOH HOH . 
O 9 HOH B 29 529 75 HOH HOH . 
O 9 HOH B 30 530 77 HOH HOH . 
O 9 HOH B 31 531 80 HOH HOH . 
O 9 HOH B 32 532 81 HOH HOH . 
O 9 HOH B 33 533 82 HOH HOH . 
O 9 HOH B 34 534 86 HOH HOH . 
O 9 HOH B 35 535 89 HOH HOH . 
O 9 HOH B 36 536 90 HOH HOH . 
O 9 HOH B 37 537 95 HOH HOH . 
O 9 HOH B 38 538 100 HOH HOH . 
O 9 HOH B 39 539 103 HOH HOH . 
O 9 HOH B 40 540 109 HOH HOH . 
O 9 HOH B 41 541 111 HOH HOH . 
O 9 HOH B 42 542 114 HOH HOH . 
O 9 HOH B 43 543 117 HOH HOH . 
O 9 HOH B 44 544 118 HOH HOH . 
O 9 HOH B 45 545 119 HOH HOH . 
O 9 HOH B 46 546 123 HOH HOH . 
O 9 HOH B 47 547 124 HOH HOH . 
O 9 HOH B 48 548 125 HOH HOH . 
O 9 HOH B 49 549 127 HOH HOH . 
O 9 HOH B 50 550 128 HOH HOH . 
O 9 HOH B 51 551 129 HOH HOH . 
O 9 HOH B 52 552 130 HOH HOH . 
O 9 HOH B 53 553 134 HOH HOH . 
O 9 HOH B 54 554 136 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . K 5 21.092 -32.313 -59.971 1 50.24 ? C1 EDO 403 B 1 
HETATM 2 O O1 EDO . . . K 5 20.232 -32.663 -58.883 1 47.45 ? O1 EDO 403 B 1 
HETATM 3 C C2 EDO . . . K 5 20.974 -33.357 -61.07 1 51.45 ? C2 EDO 403 B 1 
HETATM 4 O O2 EDO . . . K 5 20.45 -34.57 -60.5 1 51 ? O2 EDO 403 B 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           320 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#