data_4RN5
#
_model_server_result.job_id            PpIf0Oi6mDaGUvlaDTv0eQ 
_model_server_result.datetime_utc      '2024-10-22 03:32:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4rn5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":504}' 
#
_entry.id    4RN5 
#
_exptl.entry_id    4RN5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4RN5 
_cell.length_a            62.839 
_cell.length_b            62.839 
_cell.length_c            87.918 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4RN5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 275 1_555 A SG CYS 155 A CYS 424 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
metalc ? metalc1 A NE2 HIS 18 A HIS 287 1_555 C ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? 
metalc ? metalc2 C ZN ZN . A ZN 502 1_555 F O HOH . A HOH 685 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? 
metalc ? metalc3 D ZN ZN . A ZN 503 1_555 F O HOH . A HOH 755 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? 
metalc ? metalc4 D ZN ZN . A ZN 503 1_555 F O HOH . A HOH 756 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? 
metalc ? metalc5 A OD2 ASP 20 A ASP 289 1_555 D ZN ZN . A ZN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? 
metalc ? metalc6 D ZN ZN . A ZN 503 1_555 F O HOH . A HOH 757 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
_atom_sites.entry_id                     4RN5 
_atom_sites.fract_transf_matrix[1][1]    0.015914 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015914 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011374 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ACT A 1 501 1 ACT ACT . 
C 3 ZN A 1 502 1 ZN ZN . 
D 3 ZN A 1 503 2 ZN ZN . 
E 4 GOL A 1 504 1 GOL GOL . 
F 5 HOH A 1 601 1 HOH HOH . 
F 5 HOH A 2 602 2 HOH HOH . 
F 5 HOH A 3 603 3 HOH HOH . 
F 5 HOH A 4 604 4 HOH HOH . 
F 5 HOH A 5 605 5 HOH HOH . 
F 5 HOH A 6 606 6 HOH HOH . 
F 5 HOH A 7 607 7 HOH HOH . 
F 5 HOH A 8 608 8 HOH HOH . 
F 5 HOH A 9 609 9 HOH HOH . 
F 5 HOH A 10 610 10 HOH HOH . 
F 5 HOH A 11 611 11 HOH HOH . 
F 5 HOH A 12 612 12 HOH HOH . 
F 5 HOH A 13 613 13 HOH HOH . 
F 5 HOH A 14 614 14 HOH HOH . 
F 5 HOH A 15 615 15 HOH HOH . 
F 5 HOH A 16 616 16 HOH HOH . 
F 5 HOH A 17 617 17 HOH HOH . 
F 5 HOH A 18 618 18 HOH HOH . 
F 5 HOH A 19 619 19 HOH HOH . 
F 5 HOH A 20 620 20 HOH HOH . 
F 5 HOH A 21 621 21 HOH HOH . 
F 5 HOH A 22 622 22 HOH HOH . 
F 5 HOH A 23 623 23 HOH HOH . 
F 5 HOH A 24 624 24 HOH HOH . 
F 5 HOH A 25 625 25 HOH HOH . 
F 5 HOH A 26 626 26 HOH HOH . 
F 5 HOH A 27 627 27 HOH HOH . 
F 5 HOH A 28 628 28 HOH HOH . 
F 5 HOH A 29 629 29 HOH HOH . 
F 5 HOH A 30 630 30 HOH HOH . 
F 5 HOH A 31 631 31 HOH HOH . 
F 5 HOH A 32 632 32 HOH HOH . 
F 5 HOH A 33 633 33 HOH HOH . 
F 5 HOH A 34 634 34 HOH HOH . 
F 5 HOH A 35 635 35 HOH HOH . 
F 5 HOH A 36 636 36 HOH HOH . 
F 5 HOH A 37 637 37 HOH HOH . 
F 5 HOH A 38 638 38 HOH HOH . 
F 5 HOH A 39 639 39 HOH HOH . 
F 5 HOH A 40 640 40 HOH HOH . 
F 5 HOH A 41 641 41 HOH HOH . 
F 5 HOH A 42 642 42 HOH HOH . 
F 5 HOH A 43 643 43 HOH HOH . 
F 5 HOH A 44 644 44 HOH HOH . 
F 5 HOH A 45 645 45 HOH HOH . 
F 5 HOH A 46 646 46 HOH HOH . 
F 5 HOH A 47 647 47 HOH HOH . 
F 5 HOH A 48 648 48 HOH HOH . 
F 5 HOH A 49 649 49 HOH HOH . 
F 5 HOH A 50 650 50 HOH HOH . 
F 5 HOH A 51 651 51 HOH HOH . 
F 5 HOH A 52 652 52 HOH HOH . 
F 5 HOH A 53 653 53 HOH HOH . 
F 5 HOH A 54 654 54 HOH HOH . 
F 5 HOH A 55 655 55 HOH HOH . 
F 5 HOH A 56 656 56 HOH HOH . 
F 5 HOH A 57 657 57 HOH HOH . 
F 5 HOH A 58 658 58 HOH HOH . 
F 5 HOH A 59 659 59 HOH HOH . 
F 5 HOH A 60 660 60 HOH HOH . 
F 5 HOH A 61 661 61 HOH HOH . 
F 5 HOH A 62 662 62 HOH HOH . 
F 5 HOH A 63 663 63 HOH HOH . 
F 5 HOH A 64 664 64 HOH HOH . 
F 5 HOH A 65 665 65 HOH HOH . 
F 5 HOH A 66 666 66 HOH HOH . 
F 5 HOH A 67 667 67 HOH HOH . 
F 5 HOH A 68 668 68 HOH HOH . 
F 5 HOH A 69 669 69 HOH HOH . 
F 5 HOH A 70 670 70 HOH HOH . 
F 5 HOH A 71 671 71 HOH HOH . 
F 5 HOH A 72 672 72 HOH HOH . 
F 5 HOH A 73 673 73 HOH HOH . 
F 5 HOH A 74 674 74 HOH HOH . 
F 5 HOH A 75 675 75 HOH HOH . 
F 5 HOH A 76 676 76 HOH HOH . 
F 5 HOH A 77 677 77 HOH HOH . 
F 5 HOH A 78 678 78 HOH HOH . 
F 5 HOH A 79 679 79 HOH HOH . 
F 5 HOH A 80 680 80 HOH HOH . 
F 5 HOH A 81 681 81 HOH HOH . 
F 5 HOH A 82 682 82 HOH HOH . 
F 5 HOH A 83 683 83 HOH HOH . 
F 5 HOH A 84 684 84 HOH HOH . 
F 5 HOH A 85 685 85 HOH HOH . 
F 5 HOH A 86 686 86 HOH HOH . 
F 5 HOH A 87 687 87 HOH HOH . 
F 5 HOH A 88 688 88 HOH HOH . 
F 5 HOH A 89 689 89 HOH HOH . 
F 5 HOH A 90 690 90 HOH HOH . 
F 5 HOH A 91 691 91 HOH HOH . 
F 5 HOH A 92 692 92 HOH HOH . 
F 5 HOH A 93 693 93 HOH HOH . 
F 5 HOH A 94 694 94 HOH HOH . 
F 5 HOH A 95 695 95 HOH HOH . 
F 5 HOH A 96 696 96 HOH HOH . 
F 5 HOH A 97 697 97 HOH HOH . 
F 5 HOH A 98 698 98 HOH HOH . 
F 5 HOH A 99 699 99 HOH HOH . 
F 5 HOH A 100 700 100 HOH HOH . 
F 5 HOH A 101 701 101 HOH HOH . 
F 5 HOH A 102 702 102 HOH HOH . 
F 5 HOH A 103 703 103 HOH HOH . 
F 5 HOH A 104 704 104 HOH HOH . 
F 5 HOH A 105 705 105 HOH HOH . 
F 5 HOH A 106 706 106 HOH HOH . 
F 5 HOH A 107 707 107 HOH HOH . 
F 5 HOH A 108 708 108 HOH HOH . 
F 5 HOH A 109 709 109 HOH HOH . 
F 5 HOH A 110 710 110 HOH HOH . 
F 5 HOH A 111 711 111 HOH HOH . 
F 5 HOH A 112 712 112 HOH HOH . 
F 5 HOH A 113 713 113 HOH HOH . 
F 5 HOH A 114 714 114 HOH HOH . 
F 5 HOH A 115 715 115 HOH HOH . 
F 5 HOH A 116 716 116 HOH HOH . 
F 5 HOH A 117 717 117 HOH HOH . 
F 5 HOH A 118 718 118 HOH HOH . 
F 5 HOH A 119 719 119 HOH HOH . 
F 5 HOH A 120 720 120 HOH HOH . 
F 5 HOH A 121 721 122 HOH HOH . 
F 5 HOH A 122 722 123 HOH HOH . 
F 5 HOH A 123 723 124 HOH HOH . 
F 5 HOH A 124 724 125 HOH HOH . 
F 5 HOH A 125 725 126 HOH HOH . 
F 5 HOH A 126 726 127 HOH HOH . 
F 5 HOH A 127 727 128 HOH HOH . 
F 5 HOH A 128 728 129 HOH HOH . 
F 5 HOH A 129 729 130 HOH HOH . 
F 5 HOH A 130 730 131 HOH HOH . 
F 5 HOH A 131 731 132 HOH HOH . 
F 5 HOH A 132 732 133 HOH HOH . 
F 5 HOH A 133 733 134 HOH HOH . 
F 5 HOH A 134 734 135 HOH HOH . 
F 5 HOH A 135 735 136 HOH HOH . 
F 5 HOH A 136 736 137 HOH HOH . 
F 5 HOH A 137 737 138 HOH HOH . 
F 5 HOH A 138 738 139 HOH HOH . 
F 5 HOH A 139 739 140 HOH HOH . 
F 5 HOH A 140 740 141 HOH HOH . 
F 5 HOH A 141 741 142 HOH HOH . 
F 5 HOH A 142 742 143 HOH HOH . 
F 5 HOH A 143 743 144 HOH HOH . 
F 5 HOH A 144 744 145 HOH HOH . 
F 5 HOH A 145 745 146 HOH HOH . 
F 5 HOH A 146 746 147 HOH HOH . 
F 5 HOH A 147 747 148 HOH HOH . 
F 5 HOH A 148 748 149 HOH HOH . 
F 5 HOH A 149 749 150 HOH HOH . 
F 5 HOH A 150 750 151 HOH HOH . 
F 5 HOH A 151 751 152 HOH HOH . 
F 5 HOH A 152 752 153 HOH HOH . 
F 5 HOH A 153 753 154 HOH HOH . 
F 5 HOH A 154 754 155 HOH HOH . 
F 5 HOH A 155 755 156 HOH HOH . 
F 5 HOH A 156 756 157 HOH HOH . 
F 5 HOH A 157 757 158 HOH HOH . 
F 5 HOH A 158 758 159 HOH HOH . 
F 5 HOH A 159 759 160 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 4 -0.925 22.207 -6.268 1 29.62 ? C1 GOL 504 A 1 
HETATM 2 O O1 GOL . . . E 4 -1.82 21.927 -7.331 1 16.79 ? O1 GOL 504 A 1 
HETATM 3 C C2 GOL . . . E 4 -1.51 23.316 -5.389 1 26.45 ? C2 GOL 504 A 1 
HETATM 4 O O2 GOL . . . E 4 -0.483 24.233 -5.066 1 28.27 ? O2 GOL 504 A 1 
HETATM 5 C C3 GOL . . . E 4 -2.019 22.707 -4.084 1 21.76 ? C3 GOL 504 A 1 
HETATM 6 O O3 GOL . . . E 4 -0.98 21.949 -3.484 1 22.34 ? O3 GOL 504 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           266 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           6 
#