data_4RNH # _model_server_result.job_id nv3q1SKcVjcTan4GYgsJ9Q _model_server_result.datetime_utc '2025-03-04 09:29:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rnh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1501}' # _entry.id 4RNH # _exptl.entry_id 4RNH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4RNH _cell.length_a 81.3 _cell.length_b 81.3 _cell.length_c 128.1 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RNH _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_554 x-y,-y,-z-1/3 1 0 0 0 -1 0 0 0 -1 0 0 -42.7 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 233 A GLU 1189 1_555 B MG MG . A MG 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? metalc ? metalc2 A OD1 ASN 292 A ASN 1248 1_555 B MG MG . A MG 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc3 A OE1 GLU 324 A GLU 1280 1_555 B MG MG . A MG 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.962 ? metalc ? metalc4 A OD2 ASP 354 A ASP 1310 1_555 B MG MG . A MG 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc5 A OD1 ASP 355 A ASP 1311 1_555 C MG MG . A MG 1502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? metalc ? metalc6 B MG MG . A MG 1501 1_555 D O2P C2E . A C2E 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc7 B MG MG . A MG 1501 1_555 E O HOH . A HOH 1619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc8 C MG MG . A MG 1502 1_555 D O1P C2E . A C2E 1503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc9 C MG MG . A MG 1502 1_555 E O HOH . A HOH 1615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.861 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4RNH _atom_sites.fract_transf_matrix[1][1] 0.0123 _atom_sites.fract_transf_matrix[1][2] 0.007101 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014203 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007806 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 1501 2 MG MG . C 2 MG A 1 1502 4 MG MG . D 3 C2E A 1 1503 900 C2E C2E . E 4 HOH A 1 1601 1 HOH HOH . E 4 HOH A 2 1602 2 HOH HOH . E 4 HOH A 3 1603 3 HOH HOH . E 4 HOH A 4 1604 4 HOH HOH . E 4 HOH A 5 1605 5 HOH HOH . E 4 HOH A 6 1606 6 HOH HOH . E 4 HOH A 7 1607 7 HOH HOH . E 4 HOH A 8 1608 8 HOH HOH . E 4 HOH A 9 1609 9 HOH HOH . E 4 HOH A 10 1610 10 HOH HOH . E 4 HOH A 11 1611 11 HOH HOH . E 4 HOH A 12 1612 12 HOH HOH . E 4 HOH A 13 1613 13 HOH HOH . E 4 HOH A 14 1614 14 HOH HOH . E 4 HOH A 15 1615 15 HOH HOH . E 4 HOH A 16 1616 16 HOH HOH . E 4 HOH A 17 1617 17 HOH HOH . E 4 HOH A 18 1618 18 HOH HOH . E 4 HOH A 19 1619 19 HOH HOH . E 4 HOH A 20 1620 20 HOH HOH . E 4 HOH A 21 1621 21 HOH HOH . E 4 HOH A 22 1622 22 HOH HOH . E 4 HOH A 23 1623 23 HOH HOH . E 4 HOH A 24 1624 24 HOH HOH . E 4 HOH A 25 1625 25 HOH HOH . E 4 HOH A 26 1626 26 HOH HOH . E 4 HOH A 27 1627 27 HOH HOH . E 4 HOH A 28 1628 28 HOH HOH . E 4 HOH A 29 1629 29 HOH HOH . E 4 HOH A 30 1630 30 HOH HOH . E 4 HOH A 31 1631 31 HOH HOH . E 4 HOH A 32 1632 32 HOH HOH . E 4 HOH A 33 1633 33 HOH HOH . E 4 HOH A 34 1634 34 HOH HOH . E 4 HOH A 35 1635 35 HOH HOH . E 4 HOH A 36 1636 38 HOH HOH . E 4 HOH A 37 1637 39 HOH HOH . E 4 HOH A 38 1638 40 HOH HOH . E 4 HOH A 39 1639 41 HOH HOH . E 4 HOH A 40 1640 42 HOH HOH . E 4 HOH A 41 1641 43 HOH HOH . E 4 HOH A 42 1642 44 HOH HOH . E 4 HOH A 43 1643 46 HOH HOH . E 4 HOH A 44 1644 47 HOH HOH . E 4 HOH A 45 1645 48 HOH HOH . E 4 HOH A 46 1646 49 HOH HOH . E 4 HOH A 47 1647 50 HOH HOH . E 4 HOH A 48 1648 51 HOH HOH . E 4 HOH A 49 1649 52 HOH HOH . E 4 HOH A 50 1650 53 HOH HOH . E 4 HOH A 51 1651 54 HOH HOH . E 4 HOH A 52 1652 55 HOH HOH . E 4 HOH A 53 1653 56 HOH HOH . E 4 HOH A 54 1654 57 HOH HOH . E 4 HOH A 55 1655 58 HOH HOH . E 4 HOH A 56 1656 59 HOH HOH . E 4 HOH A 57 1657 60 HOH HOH . E 4 HOH A 58 1658 61 HOH HOH . E 4 HOH A 59 1659 62 HOH HOH . E 4 HOH A 60 1660 63 HOH HOH . E 4 HOH A 61 1661 64 HOH HOH . E 4 HOH A 62 1662 65 HOH HOH . E 4 HOH A 63 1663 67 HOH HOH . E 4 HOH A 64 1664 69 HOH HOH . E 4 HOH A 65 1665 70 HOH HOH . E 4 HOH A 66 1666 71 HOH HOH . E 4 HOH A 67 1667 72 HOH HOH . E 4 HOH A 68 1668 73 HOH HOH . E 4 HOH A 69 1669 74 HOH HOH . E 4 HOH A 70 1670 75 HOH HOH . E 4 HOH A 71 1671 76 HOH HOH . E 4 HOH A 72 1672 77 HOH HOH . E 4 HOH A 73 1673 78 HOH HOH . E 4 HOH A 74 1674 79 HOH HOH . E 4 HOH A 75 1675 81 HOH HOH . E 4 HOH A 76 1676 82 HOH HOH . E 4 HOH A 77 1677 83 HOH HOH . E 4 HOH A 78 1678 84 HOH HOH . E 4 HOH A 79 1679 85 HOH HOH . E 4 HOH A 80 1680 86 HOH HOH . E 4 HOH A 81 1681 87 HOH HOH . E 4 HOH A 82 1682 88 HOH HOH . E 4 HOH A 83 1683 89 HOH HOH . E 4 HOH A 84 1684 90 HOH HOH . E 4 HOH A 85 1685 92 HOH HOH . E 4 HOH A 86 1686 93 HOH HOH . E 4 HOH A 87 1687 94 HOH HOH . E 4 HOH A 88 1688 95 HOH HOH . E 4 HOH A 89 1689 96 HOH HOH . E 4 HOH A 90 1690 97 HOH HOH . E 4 HOH A 91 1691 98 HOH HOH . E 4 HOH A 92 1692 99 HOH HOH . E 4 HOH A 93 1693 100 HOH HOH . E 4 HOH A 94 1694 101 HOH HOH . E 4 HOH A 95 1695 102 HOH HOH . E 4 HOH A 96 1696 103 HOH HOH . E 4 HOH A 97 1697 104 HOH HOH . E 4 HOH A 98 1698 105 HOH HOH . E 4 HOH A 99 1699 106 HOH HOH . E 4 HOH A 100 1700 107 HOH HOH . E 4 HOH A 101 1701 109 HOH HOH . E 4 HOH A 102 1702 112 HOH HOH . E 4 HOH A 103 1703 113 HOH HOH . E 4 HOH A 104 1704 114 HOH HOH . E 4 HOH A 105 1705 119 HOH HOH . E 4 HOH A 106 1706 120 HOH HOH . E 4 HOH A 107 1707 121 HOH HOH . E 4 HOH A 108 1708 124 HOH HOH . E 4 HOH A 109 1709 128 HOH HOH . E 4 HOH A 110 1710 129 HOH HOH . E 4 HOH A 111 1711 130 HOH HOH . E 4 HOH A 112 1712 133 HOH HOH . E 4 HOH A 113 1713 134 HOH HOH . E 4 HOH A 114 1714 136 HOH HOH . E 4 HOH A 115 1715 138 HOH HOH . E 4 HOH A 116 1716 139 HOH HOH . E 4 HOH A 117 1717 140 HOH HOH . E 4 HOH A 118 1718 141 HOH HOH . E 4 HOH A 119 1719 142 HOH HOH . E 4 HOH A 120 1720 146 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 19.364 _atom_site.Cartn_y -18.149 _atom_site.Cartn_z -15.671 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 42.53 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 448 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #