data_4RO2 # _model_server_result.job_id du5OaVzlHnXnaaB_vVEtng _model_server_result.datetime_utc '2024-11-15 11:32:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ro2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"GA","auth_seq_id":201}' # _entry.id 4RO2 # _exptl.entry_id 4RO2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 75.067 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCINE _entity.pdbx_number_of_molecules 28 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4RO2 _cell.length_a 67.696 _cell.length_b 91.045 _cell.length_c 67.622 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RO2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 17 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,MA,NA 1 1,2 C,D,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,OA,PA 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_656 -x+1,y,-z+3/2 -1 0 0 0 1 0 0 0 -1 67.696 0 101.433 3 'crystal symmetry operation' 3_755 -x+2,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 135.392 0 33.811 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 Z N N ? 3 AA N N ? 3 BA N N ? 3 CA N N ? 3 DA N N ? 3 EA N N ? 3 GA N N ? 3 HA N N ? 3 IA N N ? 3 JA N N ? 3 KA N N # _chem_comp.formula 'C2 H5 N O2' _chem_comp.formula_weight 75.067 _chem_comp.id GLY _chem_comp.mon_nstd_flag y _chem_comp.name GLYCINE _chem_comp.type 'peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA GLY sing 114 n n N H GLY sing 115 n n N H2 GLY sing 116 n n CA C GLY sing 117 n n CA HA2 GLY sing 118 n n CA HA3 GLY sing 119 n n C O GLY doub 120 n n C OXT GLY sing 121 n n OXT HXT GLY sing 122 n n # _atom_sites.entry_id 4RO2 _atom_sites.fract_transf_matrix[1][1] 0.014772 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010984 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014788 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 3P8 A 1 201 2 3P8 MAM . F 3 GLY A 1 202 10 GLY GLY . G 3 GLY A 1 203 14 GLY GLY . H 3 GLY A 1 204 16 GLY GLY . I 3 GLY A 1 205 18 GLY GLY . J 3 GLY A 1 206 20 GLY GLY . K 3 GLY A 1 207 24 GLY GLY . L 3 GLY A 1 208 26 GLY GLY . M 3 GLY A 1 209 27 GLY GLY . N 3 GLY B 1 201 3 GLY GLY . O 3 GLY B 1 202 8 GLY GLY . P 3 GLY B 1 203 9 GLY GLY . Q 3 GLY B 1 204 12 GLY GLY . R 3 GLY B 1 205 13 GLY GLY . S 3 GLY B 1 206 15 GLY GLY . T 3 GLY B 1 207 22 GLY GLY . U 3 GLY B 1 208 23 GLY GLY . V 3 GLY B 1 209 25 GLY GLY . W 4 MPD B 1 210 2 MPD MPD . X 4 MPD B 1 211 3 MPD MPD . Y 2 3P8 C 1 201 1 3P8 MAM . Z 3 GLY C 1 202 2 GLY GLY . AA 3 GLY C 1 203 4 GLY GLY . BA 3 GLY C 1 204 5 GLY GLY . CA 3 GLY C 1 205 6 GLY GLY . DA 3 GLY C 1 206 21 GLY GLY . EA 3 GLY C 1 207 28 GLY GLY . FA 4 MPD C 1 208 4 MPD MPD . GA 3 GLY D 1 201 1 GLY GLY . HA 3 GLY D 1 202 7 GLY GLY . IA 3 GLY D 1 203 11 GLY GLY . JA 3 GLY D 1 204 17 GLY GLY . KA 3 GLY D 1 205 29 GLY GLY . LA 4 MPD D 1 206 1 MPD MPD . MA 5 HOH A 1 301 14 HOH HOH . MA 5 HOH A 2 302 34 HOH HOH . MA 5 HOH A 3 303 40 HOH HOH . MA 5 HOH A 4 304 47 HOH HOH . MA 5 HOH A 5 305 59 HOH HOH . MA 5 HOH A 6 306 70 HOH HOH . MA 5 HOH A 7 307 71 HOH HOH . MA 5 HOH A 8 308 77 HOH HOH . MA 5 HOH A 9 309 79 HOH HOH . MA 5 HOH A 10 310 82 HOH HOH . MA 5 HOH A 11 311 88 HOH HOH . MA 5 HOH A 12 312 89 HOH HOH . NA 5 HOH B 1 301 51 HOH HOH . NA 5 HOH B 2 302 54 HOH HOH . NA 5 HOH B 3 303 56 HOH HOH . NA 5 HOH B 4 304 61 HOH HOH . NA 5 HOH B 5 305 63 HOH HOH . NA 5 HOH B 6 306 64 HOH HOH . NA 5 HOH B 7 307 72 HOH HOH . NA 5 HOH B 8 308 85 HOH HOH . OA 5 HOH C 1 301 3 HOH HOH . OA 5 HOH C 2 302 5 HOH HOH . OA 5 HOH C 3 303 7 HOH HOH . OA 5 HOH C 4 304 8 HOH HOH . OA 5 HOH C 5 305 16 HOH HOH . OA 5 HOH C 6 306 17 HOH HOH . OA 5 HOH C 7 307 18 HOH HOH . OA 5 HOH C 8 308 31 HOH HOH . OA 5 HOH C 9 309 43 HOH HOH . OA 5 HOH C 10 310 44 HOH HOH . OA 5 HOH C 11 311 45 HOH HOH . OA 5 HOH C 12 312 50 HOH HOH . OA 5 HOH C 13 313 55 HOH HOH . OA 5 HOH C 14 314 65 HOH HOH . OA 5 HOH C 15 315 76 HOH HOH . OA 5 HOH C 16 316 83 HOH HOH . OA 5 HOH C 17 317 84 HOH HOH . PA 5 HOH D 1 301 4 HOH HOH . PA 5 HOH D 2 302 13 HOH HOH . PA 5 HOH D 3 303 19 HOH HOH . PA 5 HOH D 4 304 21 HOH HOH . PA 5 HOH D 5 305 24 HOH HOH . PA 5 HOH D 6 306 25 HOH HOH . PA 5 HOH D 7 307 26 HOH HOH . PA 5 HOH D 8 308 32 HOH HOH . PA 5 HOH D 9 309 46 HOH HOH . PA 5 HOH D 10 310 57 HOH HOH . PA 5 HOH D 11 311 58 HOH HOH . PA 5 HOH D 12 312 75 HOH HOH . PA 5 HOH D 13 313 78 HOH HOH . PA 5 HOH D 14 314 87 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N GLY . . . GA 3 58.508 51.651 12.549 1 44.76 ? N GLY 201 D 1 HETATM 2 C CA GLY . . . GA 3 58.026 52.37 11.317 1 46.09 ? CA GLY 201 D 1 HETATM 3 C C GLY . . . GA 3 58.023 53.904 11.361 1 47.83 ? C GLY 201 D 1 HETATM 4 O O GLY . . . GA 3 57.838 54.558 10.35 1 46.26 ? O GLY 201 D 1 HETATM 5 O OXT GLY . . . GA 3 58.193 54.593 12.369 1 45.64 ? OXT GLY 201 D 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 374 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #