data_4ROP # _model_server_result.job_id 7C3CXtRPkTug3leyOah5LQ _model_server_result.datetime_utc '2024-12-21 16:24:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rop # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":504}' # _entry.id 4ROP # _exptl.entry_id 4ROP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4ROP _cell.length_a 164.282 _cell.length_b 164.282 _cell.length_c 75.5 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ROP _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? octameric 8 author_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 1 2 A,B,C,D,E,F 1 3 A,B,C,D,E,F 1 4 A,B,C,D,E,F 1 5 A,B,C,D,E,F 1 6 A,B,C,D,E,F 1 7 A,B,C,D,E,F 1 8 A,B,C,D,E,F 2 1,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 5 'crystal symmetry operation' 5_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 0 0 75.5 6 'crystal symmetry operation' 6_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 75.5 7 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 75.5 8 'crystal symmetry operation' 8_556 -y,-x,-z+1 0 -1 0 -1 0 0 0 0 -1 0 0 75.5 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O SER 125 A SER 129 1_555 D CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc2 A O ASN 158 A ASN 162 1_555 B CA CA . A CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc3 A OD2 ASP 242 A ASP 246 1_555 E CA CA . A CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc4 A OE2 GLU 283 A GLU 287 1_555 E CA CA . A CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? metalc ? metalc5 A OD2 ASP 310 A ASP 314 1_555 E CA CA . A CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc6 A OE1 GLU 411 A GLU 415 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.757 ? metalc ? metalc7 A OE2 GLU 411 A GLU 415 1_555 C CA CA . A CA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.885 ? metalc ? metalc8 B CA CA . A CA 501 1_555 F O HOH . A HOH 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc9 B CA CA . A CA 501 1_555 F O HOH . A HOH 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc10 B CA CA . A CA 501 1_555 F O HOH . A HOH 741 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc11 C CA CA . A CA 502 1_555 F O HOH . A HOH 698 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc12 C CA CA . A CA 502 1_555 F O HOH . A HOH 734 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.864 ? metalc ? metalc13 D CA CA . A CA 503 1_555 F O HOH . A HOH 640 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc14 D CA CA . A CA 503 1_555 F O HOH . A HOH 700 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc15 D CA CA . A CA 503 1_555 F O HOH . A HOH 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc16 D CA CA . A CA 503 1_555 F O HOH . A HOH 739 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc17 D CA CA . A CA 503 1_555 F O HOH . A HOH 746 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc18 D CA CA . A CA 503 1_555 F O HOH . A HOH 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc19 E CA CA . A CA 504 1_555 F O HOH . A HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc20 E CA CA . A CA 504 1_555 F O HOH . A HOH 670 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc21 E CA CA . A CA 504 1_555 F O HOH . A HOH 677 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4ROP _atom_sites.fract_transf_matrix[1][1] 0.006087 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006087 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013245 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 501 501 CA CA . C 2 CA A 1 502 505 CA CA . D 2 CA A 1 503 506 CA CA . E 2 CA A 1 504 1 CA CA . F 3 HOH A 1 601 673 HOH HOH . F 3 HOH A 2 602 704 HOH HOH . F 3 HOH A 3 603 666 HOH HOH . F 3 HOH A 4 604 732 HOH HOH . F 3 HOH A 5 605 697 HOH HOH . F 3 HOH A 6 606 641 HOH HOH . F 3 HOH A 7 607 734 HOH HOH . F 3 HOH A 8 608 724 HOH HOH . F 3 HOH A 9 609 653 HOH HOH . F 3 HOH A 10 610 6 HOH HOH . F 3 HOH A 11 611 635 HOH HOH . F 3 HOH A 12 612 649 HOH HOH . F 3 HOH A 13 613 696 HOH HOH . F 3 HOH A 14 614 725 HOH HOH . F 3 HOH A 15 615 694 HOH HOH . F 3 HOH A 16 616 664 HOH HOH . F 3 HOH A 17 617 698 HOH HOH . F 3 HOH A 18 618 684 HOH HOH . F 3 HOH A 19 619 721 HOH HOH . F 3 HOH A 20 620 731 HOH HOH . F 3 HOH A 21 621 726 HOH HOH . F 3 HOH A 22 622 10 HOH HOH . F 3 HOH A 23 623 605 HOH HOH . F 3 HOH A 24 624 625 HOH HOH . F 3 HOH A 25 625 643 HOH HOH . F 3 HOH A 26 626 669 HOH HOH . F 3 HOH A 27 627 660 HOH HOH . F 3 HOH A 28 628 4 HOH HOH . F 3 HOH A 29 629 709 HOH HOH . F 3 HOH A 30 630 616 HOH HOH . F 3 HOH A 31 631 659 HOH HOH . F 3 HOH A 32 632 702 HOH HOH . F 3 HOH A 33 633 621 HOH HOH . F 3 HOH A 34 634 656 HOH HOH . F 3 HOH A 35 635 687 HOH HOH . F 3 HOH A 36 636 691 HOH HOH . F 3 HOH A 37 637 712 HOH HOH . F 3 HOH A 38 638 607 HOH HOH . F 3 HOH A 39 639 739 HOH HOH . F 3 HOH A 40 640 668 HOH HOH . F 3 HOH A 41 641 604 HOH HOH . F 3 HOH A 42 642 637 HOH HOH . F 3 HOH A 43 643 690 HOH HOH . F 3 HOH A 44 644 677 HOH HOH . F 3 HOH A 45 645 658 HOH HOH . F 3 HOH A 46 646 663 HOH HOH . F 3 HOH A 47 647 603 HOH HOH . F 3 HOH A 48 648 8 HOH HOH . F 3 HOH A 49 649 640 HOH HOH . F 3 HOH A 50 650 678 HOH HOH . F 3 HOH A 51 651 665 HOH HOH . F 3 HOH A 52 652 615 HOH HOH . F 3 HOH A 53 653 693 HOH HOH . F 3 HOH A 54 654 680 HOH HOH . F 3 HOH A 55 655 652 HOH HOH . F 3 HOH A 56 656 723 HOH HOH . F 3 HOH A 57 657 720 HOH HOH . F 3 HOH A 58 658 716 HOH HOH . F 3 HOH A 59 659 5 HOH HOH . F 3 HOH A 60 660 681 HOH HOH . F 3 HOH A 61 661 738 HOH HOH . F 3 HOH A 62 662 608 HOH HOH . F 3 HOH A 63 663 628 HOH HOH . F 3 HOH A 64 664 662 HOH HOH . F 3 HOH A 65 665 7 HOH HOH . F 3 HOH A 66 666 630 HOH HOH . F 3 HOH A 67 667 618 HOH HOH . F 3 HOH A 68 668 646 HOH HOH . F 3 HOH A 69 669 654 HOH HOH . F 3 HOH A 70 670 642 HOH HOH . F 3 HOH A 71 671 688 HOH HOH . F 3 HOH A 72 672 719 HOH HOH . F 3 HOH A 73 673 744 HOH HOH . F 3 HOH A 74 674 648 HOH HOH . F 3 HOH A 75 675 676 HOH HOH . F 3 HOH A 76 676 622 HOH HOH . F 3 HOH A 77 677 627 HOH HOH . F 3 HOH A 78 678 707 HOH HOH . F 3 HOH A 79 679 623 HOH HOH . F 3 HOH A 80 680 606 HOH HOH . F 3 HOH A 81 681 626 HOH HOH . F 3 HOH A 82 682 682 HOH HOH . F 3 HOH A 83 683 686 HOH HOH . F 3 HOH A 84 684 708 HOH HOH . F 3 HOH A 85 685 735 HOH HOH . F 3 HOH A 86 686 715 HOH HOH . F 3 HOH A 87 687 689 HOH HOH . F 3 HOH A 88 688 601 HOH HOH . F 3 HOH A 89 689 620 HOH HOH . F 3 HOH A 90 690 634 HOH HOH . F 3 HOH A 91 691 602 HOH HOH . F 3 HOH A 92 692 632 HOH HOH . F 3 HOH A 93 693 736 HOH HOH . F 3 HOH A 94 694 667 HOH HOH . F 3 HOH A 95 695 614 HOH HOH . F 3 HOH A 96 696 674 HOH HOH . F 3 HOH A 97 697 705 HOH HOH . F 3 HOH A 98 698 671 HOH HOH . F 3 HOH A 99 699 683 HOH HOH . F 3 HOH A 100 700 741 HOH HOH . F 3 HOH A 101 701 624 HOH HOH . F 3 HOH A 102 702 617 HOH HOH . F 3 HOH A 103 703 647 HOH HOH . F 3 HOH A 104 704 631 HOH HOH . F 3 HOH A 105 705 670 HOH HOH . F 3 HOH A 106 706 695 HOH HOH . F 3 HOH A 107 707 657 HOH HOH . F 3 HOH A 108 708 745 HOH HOH . F 3 HOH A 109 709 629 HOH HOH . F 3 HOH A 110 710 633 HOH HOH . F 3 HOH A 111 711 710 HOH HOH . F 3 HOH A 112 712 639 HOH HOH . F 3 HOH A 113 713 661 HOH HOH . F 3 HOH A 114 714 675 HOH HOH . F 3 HOH A 115 715 703 HOH HOH . F 3 HOH A 116 716 619 HOH HOH . F 3 HOH A 117 717 1 HOH HOH . F 3 HOH A 118 718 717 HOH HOH . F 3 HOH A 119 719 609 HOH HOH . F 3 HOH A 120 720 700 HOH HOH . F 3 HOH A 121 721 613 HOH HOH . F 3 HOH A 122 722 692 HOH HOH . F 3 HOH A 123 723 679 HOH HOH . F 3 HOH A 124 724 672 HOH HOH . F 3 HOH A 125 725 722 HOH HOH . F 3 HOH A 126 726 610 HOH HOH . F 3 HOH A 127 727 733 HOH HOH . F 3 HOH A 128 728 638 HOH HOH . F 3 HOH A 129 729 699 HOH HOH . F 3 HOH A 130 730 728 HOH HOH . F 3 HOH A 131 731 611 HOH HOH . F 3 HOH A 132 732 612 HOH HOH . F 3 HOH A 133 733 706 HOH HOH . F 3 HOH A 134 734 9 HOH HOH . F 3 HOH A 135 735 3 HOH HOH . F 3 HOH A 136 736 644 HOH HOH . F 3 HOH A 137 737 650 HOH HOH . F 3 HOH A 138 738 701 HOH HOH . F 3 HOH A 139 739 746 HOH HOH . F 3 HOH A 140 740 747 HOH HOH . F 3 HOH A 141 741 636 HOH HOH . F 3 HOH A 142 742 645 HOH HOH . F 3 HOH A 143 743 743 HOH HOH . F 3 HOH A 144 744 730 HOH HOH . F 3 HOH A 145 745 711 HOH HOH . F 3 HOH A 146 746 742 HOH HOH . F 3 HOH A 147 747 2 HOH HOH . F 3 HOH A 148 748 651 HOH HOH . F 3 HOH A 149 749 655 HOH HOH . F 3 HOH A 150 750 718 HOH HOH . F 3 HOH A 151 751 740 HOH HOH . F 3 HOH A 152 752 714 HOH HOH . F 3 HOH A 153 753 727 HOH HOH . F 3 HOH A 154 754 713 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x -50.055 _atom_site.Cartn_y 17.913 _atom_site.Cartn_z 31.329 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.37 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 504 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #