data_4RPP # _model_server_result.job_id 2Vvjzqzqcc6uMOs7VL1E0w _model_server_result.datetime_utc '2025-02-27 10:03:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rpp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":600}' # _entry.id 4RPP # _exptl.entry_id 4RPP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 340.116 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 1,6-di-O-phosphono-beta-D-fructofuranose _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.24 _cell.angle_gamma 90 _cell.entry_id 4RPP _cell.length_a 81.674 _cell.length_b 152.554 _cell.length_c 97.676 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RPP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C6 H14 O12 P2' _chem_comp.formula_weight 340.116 _chem_comp.id FBP _chem_comp.mon_nstd_flag n _chem_comp.name 1,6-di-O-phosphono-beta-D-fructofuranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms BETA-FRUCTOSE-1,6-DIPHOSPHATE;FRUCTOSE-1,6-BISPHOSPHATE;1,6-di-O-phosphono-beta-D-fructose;1,6-di-O-phosphono-D-fructose;1,6-di-O-phosphono-fructose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O1P FBP doub 83 n n P1 O2P FBP sing 84 n n P1 O3P FBP sing 85 n n P1 O1 FBP sing 86 n n O2P HOP2 FBP sing 87 n n O3P HOP3 FBP sing 88 n n O1 C1 FBP sing 89 n n C1 C2 FBP sing 90 n n C1 H11 FBP sing 91 n n C1 H12 FBP sing 92 n n C2 O2 FBP sing 93 n n C2 C3 FBP sing 94 n n C2 O5 FBP sing 95 n n O2 HO2 FBP sing 96 n n C3 O3 FBP sing 97 n n C3 C4 FBP sing 98 n n C3 H3 FBP sing 99 n n O3 HO3 FBP sing 100 n n C4 O4 FBP sing 101 n n C4 C5 FBP sing 102 n n C4 H4 FBP sing 103 n n O4 HO4 FBP sing 104 n n C5 O5 FBP sing 105 n n C5 C6 FBP sing 106 n n C5 H5 FBP sing 107 n n C6 O6 FBP sing 108 n n C6 H61 FBP sing 109 n n C6 H62 FBP sing 110 n n O6 P2 FBP sing 111 n n P2 O4P FBP doub 112 n n P2 O5P FBP sing 113 n n P2 O6P FBP sing 114 n n O5P HOP5 FBP sing 115 n n O6P HOP6 FBP sing 116 n n # _pdbx_chem_comp_identifier.comp_id FBP _pdbx_chem_comp_identifier.identifier b-D-Fruf1PO36PO3 _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 4RPP _atom_sites.fract_transf_matrix[1][1] 0.012244 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003107 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006555 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010562 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FBP A 1 600 600 FBP FBP . F 2 FBP B 1 600 600 FBP FBP . G 2 FBP C 1 600 600 FBP FBP . H 2 FBP D 1 600 600 FBP FBP . I 3 HOH A 1 701 1022 HOH HOH . I 3 HOH A 2 702 1025 HOH HOH . I 3 HOH A 3 703 1026 HOH HOH . I 3 HOH A 4 704 1027 HOH HOH . I 3 HOH A 5 705 1028 HOH HOH . I 3 HOH A 6 706 1029 HOH HOH . I 3 HOH A 7 707 1043 HOH HOH . J 3 HOH B 1 701 1012 HOH HOH . J 3 HOH B 2 702 1030 HOH HOH . J 3 HOH B 3 703 1031 HOH HOH . J 3 HOH B 4 704 1032 HOH HOH . J 3 HOH B 5 705 1033 HOH HOH . J 3 HOH B 6 706 1034 HOH HOH . J 3 HOH B 7 707 1042 HOH HOH . K 3 HOH C 1 701 1011 HOH HOH . K 3 HOH C 2 702 1019 HOH HOH . K 3 HOH C 3 703 1020 HOH HOH . K 3 HOH C 4 704 1021 HOH HOH . K 3 HOH C 5 705 1035 HOH HOH . K 3 HOH C 6 706 1036 HOH HOH . K 3 HOH C 7 707 1037 HOH HOH . K 3 HOH C 8 708 1038 HOH HOH . L 3 HOH D 1 701 1013 HOH HOH . L 3 HOH D 2 702 1014 HOH HOH . L 3 HOH D 3 703 1015 HOH HOH . L 3 HOH D 4 704 1018 HOH HOH . L 3 HOH D 5 705 1023 HOH HOH . L 3 HOH D 6 706 1039 HOH HOH . L 3 HOH D 7 707 1040 HOH HOH . L 3 HOH D 8 708 1041 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 FBP . . . H 2 71.669 28.092 88.533 1 66.13 ? P1 FBP 600 D 1 HETATM 2 O O1P FBP . . . H 2 72.94 28.693 87.981 1 58.39 ? O1P FBP 600 D 1 HETATM 3 O O2P FBP . . . H 2 71.877 26.635 88.872 1 70.47 ? O2P FBP 600 D 1 HETATM 4 O O3P FBP . . . H 2 71.247 28.853 89.766 1 78.06 ? O3P FBP 600 D 1 HETATM 5 O O1 FBP . . . H 2 70.506 28.186 87.429 1 83.51 ? O1 FBP 600 D 1 HETATM 6 C C1 FBP . . . H 2 70.503 27.28 86.351 1 79.62 ? C1 FBP 600 D 1 HETATM 7 C C2 FBP . . . H 2 69.074 26.908 85.99 1 72.94 ? C2 FBP 600 D 1 HETATM 8 O O2 FBP . . . H 2 69.075 26.197 84.726 1 89.28 ? O2 FBP 600 D 1 HETATM 9 C C3 FBP . . . H 2 68.191 28.137 85.856 1 69.31 ? C3 FBP 600 D 1 HETATM 10 O O3 FBP . . . H 2 68.134 28.574 84.524 1 71.12 ? O3 FBP 600 D 1 HETATM 11 C C4 FBP . . . H 2 66.849 27.646 86.352 1 62.55 ? C4 FBP 600 D 1 HETATM 12 O O4 FBP . . . H 2 66.097 28.693 86.917 1 66.67 ? O4 FBP 600 D 1 HETATM 13 C C5 FBP . . . H 2 67.25 26.625 87.405 1 61.89 ? C5 FBP 600 D 1 HETATM 14 O O5 FBP . . . H 2 68.492 26.087 86.989 1 62.71 ? O5 FBP 600 D 1 HETATM 15 C C6 FBP . . . H 2 66.19 25.549 87.579 1 61.86 ? C6 FBP 600 D 1 HETATM 16 O O6 FBP . . . H 2 66.196 25.039 88.89 1 62.3 ? O6 FBP 600 D 1 HETATM 17 P P2 FBP . . . H 2 64.811 24.561 89.555 1 81.71 ? P2 FBP 600 D 1 HETATM 18 O O4P FBP . . . H 2 64.471 23.17 89.077 1 65.28 ? O4P FBP 600 D 1 HETATM 19 O O5P FBP . . . H 2 63.72 25.509 89.116 1 54.69 ? O5P FBP 600 D 1 HETATM 20 O O6P FBP . . . H 2 64.942 24.569 91.06 1 76.23 ? O6P FBP 600 D 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 20 #