data_4RR2 # _model_server_result.job_id s9qcFOpk9GSC3ky4AEAMdw _model_server_result.datetime_utc '2024-11-22 00:25:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rr2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1000}' # _entry.id 4RR2 # _exptl.entry_id 4RR2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.64 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 93.82 _cell.angle_beta 96.57 _cell.angle_gamma 111.72 _cell.entry_id 4RR2 _cell.length_a 86.195 _cell.length_b 88.899 _cell.length_c 94.682 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RR2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,H,I 1 1 C,D,F,G,J,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 121 A CYS 121 1_555 E ZN ZN . A ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc2 A SG CYS 122 A CYS 122 1_555 E ZN ZN . A ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc3 A SG CYS 128 A CYS 128 1_555 E ZN ZN . A ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc4 A SG CYS 131 A CYS 131 1_555 E ZN ZN . A ZN 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc5 C SG CYS 121 C CYS 121 1_555 F ZN ZN . C ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc6 C SG CYS 122 C CYS 122 1_555 F ZN ZN . C ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc7 C SG CYS 128 C CYS 128 1_555 F ZN ZN . C ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc8 C SG CYS 131 C CYS 131 1_555 F ZN ZN . C ZN 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc9 D SG CYS 287 D CYS 287 1_555 G FE4 SF4 . D SF4 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc10 D SG CYS 367 D CYS 367 1_555 G FE1 SF4 . D SF4 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc11 D SG CYS 384 D CYS 384 1_555 G FE2 SF4 . D SF4 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc12 D SG CYS 424 D CYS 424 1_555 G FE3 SF4 . D SF4 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 290 n n FE1 S3 SF4 sing 291 n n FE1 S4 SF4 sing 292 n n FE2 S1 SF4 sing 293 n n FE2 S3 SF4 sing 294 n n FE2 S4 SF4 sing 295 n n FE3 S1 SF4 sing 296 n n FE3 S2 SF4 sing 297 n n FE3 S4 SF4 sing 298 n n FE4 S1 SF4 sing 299 n n FE4 S2 SF4 sing 300 n n FE4 S3 SF4 sing 301 n n # _atom_sites.entry_id 4RR2 _atom_sites.fract_transf_matrix[1][1] 0.011602 _atom_sites.fract_transf_matrix[1][2] 0.004621 _atom_sites.fract_transf_matrix[1][3] 0.001894 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012108 _atom_sites.fract_transf_matrix[2][3] 0.001439 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010706 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 800 800 ZN ZN2 . F 3 ZN C 1 900 900 ZN ZN2 . G 4 SF4 D 1 1000 1000 SF4 SF4 . H 5 HOH A 1 901 7 HOH HOH . H 5 HOH A 2 902 9 HOH HOH . H 5 HOH A 3 903 10 HOH HOH . H 5 HOH A 4 904 11 HOH HOH . H 5 HOH A 5 905 14 HOH HOH . H 5 HOH A 6 906 17 HOH HOH . H 5 HOH A 7 907 20 HOH HOH . H 5 HOH A 8 908 23 HOH HOH . H 5 HOH A 9 909 33 HOH HOH . H 5 HOH A 10 910 38 HOH HOH . H 5 HOH A 11 911 40 HOH HOH . H 5 HOH A 12 912 46 HOH HOH . H 5 HOH A 13 913 49 HOH HOH . H 5 HOH A 14 914 53 HOH HOH . H 5 HOH A 15 915 57 HOH HOH . H 5 HOH A 16 916 61 HOH HOH . H 5 HOH A 17 917 71 HOH HOH . H 5 HOH A 18 918 72 HOH HOH . H 5 HOH A 19 919 73 HOH HOH . H 5 HOH A 20 920 82 HOH HOH . H 5 HOH A 21 921 83 HOH HOH . H 5 HOH A 22 922 84 HOH HOH . H 5 HOH A 23 923 88 HOH HOH . I 5 HOH B 1 601 25 HOH HOH . I 5 HOH B 2 602 44 HOH HOH . I 5 HOH B 3 603 79 HOH HOH . I 5 HOH B 4 604 81 HOH HOH . J 5 HOH C 1 1001 1 HOH HOH . J 5 HOH C 2 1002 2 HOH HOH . J 5 HOH C 3 1003 4 HOH HOH . J 5 HOH C 4 1004 5 HOH HOH . J 5 HOH C 5 1005 6 HOH HOH . J 5 HOH C 6 1006 12 HOH HOH . J 5 HOH C 7 1007 13 HOH HOH . J 5 HOH C 8 1008 15 HOH HOH . J 5 HOH C 9 1009 16 HOH HOH . J 5 HOH C 10 1010 18 HOH HOH . J 5 HOH C 11 1011 21 HOH HOH . J 5 HOH C 12 1012 26 HOH HOH . J 5 HOH C 13 1013 27 HOH HOH . J 5 HOH C 14 1014 28 HOH HOH . J 5 HOH C 15 1015 29 HOH HOH . J 5 HOH C 16 1016 30 HOH HOH . J 5 HOH C 17 1017 31 HOH HOH . J 5 HOH C 18 1018 32 HOH HOH . J 5 HOH C 19 1019 34 HOH HOH . J 5 HOH C 20 1020 36 HOH HOH . J 5 HOH C 21 1021 37 HOH HOH . J 5 HOH C 22 1022 41 HOH HOH . J 5 HOH C 23 1023 43 HOH HOH . J 5 HOH C 24 1024 45 HOH HOH . J 5 HOH C 25 1025 47 HOH HOH . J 5 HOH C 26 1026 48 HOH HOH . J 5 HOH C 27 1027 51 HOH HOH . J 5 HOH C 28 1028 52 HOH HOH . J 5 HOH C 29 1029 59 HOH HOH . J 5 HOH C 30 1030 63 HOH HOH . J 5 HOH C 31 1031 64 HOH HOH . J 5 HOH C 32 1032 65 HOH HOH . J 5 HOH C 33 1033 67 HOH HOH . J 5 HOH C 34 1034 68 HOH HOH . J 5 HOH C 35 1035 69 HOH HOH . J 5 HOH C 36 1036 74 HOH HOH . J 5 HOH C 37 1037 76 HOH HOH . J 5 HOH C 38 1038 78 HOH HOH . J 5 HOH C 39 1039 85 HOH HOH . J 5 HOH C 40 1040 86 HOH HOH . K 5 HOH D 1 1101 3 HOH HOH . K 5 HOH D 2 1102 8 HOH HOH . K 5 HOH D 3 1103 19 HOH HOH . K 5 HOH D 4 1104 22 HOH HOH . K 5 HOH D 5 1105 24 HOH HOH . K 5 HOH D 6 1106 35 HOH HOH . K 5 HOH D 7 1107 39 HOH HOH . K 5 HOH D 8 1108 42 HOH HOH . K 5 HOH D 9 1109 50 HOH HOH . K 5 HOH D 10 1110 54 HOH HOH . K 5 HOH D 11 1111 55 HOH HOH . K 5 HOH D 12 1112 56 HOH HOH . K 5 HOH D 13 1113 58 HOH HOH . K 5 HOH D 14 1114 60 HOH HOH . K 5 HOH D 15 1115 62 HOH HOH . K 5 HOH D 16 1116 66 HOH HOH . K 5 HOH D 17 1117 70 HOH HOH . K 5 HOH D 18 1118 75 HOH HOH . K 5 HOH D 19 1119 77 HOH HOH . K 5 HOH D 20 1120 80 HOH HOH . K 5 HOH D 21 1121 87 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . G 4 44.887 93.307 77.866 1 30.85 ? FE1 SF4 1000 D 1 HETATM 2 FE FE2 SF4 . . . G 4 46.53 91.008 77.471 1 25.43 ? FE2 SF4 1000 D 1 HETATM 3 FE FE3 SF4 . . . G 4 45.62 91.581 80.197 1 38.44 ? FE3 SF4 1000 D 1 HETATM 4 FE FE4 SF4 . . . G 4 47.82 93.505 78.773 1 32.29 ? FE4 SF4 1000 D 1 HETATM 5 S S1 SF4 . . . G 4 47.6 91.411 79.326 1 17.67 ? S1 SF4 1000 D 1 HETATM 6 S S2 SF4 . . . G 4 45.905 93.703 79.72 1 19.23 ? S2 SF4 1000 D 1 HETATM 7 S S3 SF4 . . . G 4 46.836 93.152 76.982 1 27.57 ? S3 SF4 1000 D 1 HETATM 8 S S4 SF4 . . . G 4 44.639 91.212 78.388 1 26.53 ? S4 SF4 1000 D 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #