data_4RR4 # _model_server_result.job_id GT-IyfujXUcHbdvuJnYROQ _model_server_result.datetime_utc '2024-10-19 15:43:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rr4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 4RR4 # _exptl.entry_id 4RR4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 156.096 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OROTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4RR4 _cell.length_a 91.38 _cell.length_b 91.38 _cell.length_c 122.441 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RR4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H4 N2 O4' _chem_comp.formula_weight 156.096 _chem_comp.id ORO _chem_comp.mon_nstd_flag . _chem_comp.name 'OROTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 ORO sing 334 n y N1 C6 ORO sing 335 n y N1 HN1 ORO sing 336 n n C2 O2 ORO doub 337 n n C2 N3 ORO sing 338 n y N3 C4 ORO sing 339 n y N3 HN3 ORO sing 340 n n C4 O4 ORO doub 341 n n C4 C5 ORO sing 342 n y C5 C6 ORO doub 343 n y C5 H5 ORO sing 344 n n C6 C7 ORO sing 345 n n C7 O71 ORO doub 346 n n C7 O72 ORO sing 347 n n O72 HO7 ORO sing 348 n n # _atom_sites.entry_id 4RR4 _atom_sites.fract_transf_matrix[1][1] 0.010943 _atom_sites.fract_transf_matrix[1][2] 0.006318 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012636 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008167 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 401 398 FMN FMN . C 3 ORO A 1 402 399 ORO ORO . D 4 3V1 A 1 403 1 3V1 367 . E 5 SO4 A 1 404 1 SO4 SO4 . F 5 SO4 A 1 405 2 SO4 SO4 . G 6 HOH A 1 501 1 HOH HOH . G 6 HOH A 2 502 2 HOH HOH . G 6 HOH A 3 503 3 HOH HOH . G 6 HOH A 4 504 4 HOH HOH . G 6 HOH A 5 505 5 HOH HOH . G 6 HOH A 6 506 6 HOH HOH . G 6 HOH A 7 507 7 HOH HOH . G 6 HOH A 8 508 8 HOH HOH . G 6 HOH A 9 509 9 HOH HOH . G 6 HOH A 10 510 10 HOH HOH . G 6 HOH A 11 511 11 HOH HOH . G 6 HOH A 12 512 12 HOH HOH . G 6 HOH A 13 513 13 HOH HOH . G 6 HOH A 14 514 15 HOH HOH . G 6 HOH A 15 515 16 HOH HOH . G 6 HOH A 16 516 18 HOH HOH . G 6 HOH A 17 517 19 HOH HOH . G 6 HOH A 18 518 20 HOH HOH . G 6 HOH A 19 519 24 HOH HOH . G 6 HOH A 20 520 25 HOH HOH . G 6 HOH A 21 521 27 HOH HOH . G 6 HOH A 22 522 43 HOH HOH . G 6 HOH A 23 523 44 HOH HOH . G 6 HOH A 24 524 45 HOH HOH . G 6 HOH A 25 525 46 HOH HOH . G 6 HOH A 26 526 47 HOH HOH . G 6 HOH A 27 527 48 HOH HOH . G 6 HOH A 28 528 49 HOH HOH . G 6 HOH A 29 529 50 HOH HOH . G 6 HOH A 30 530 51 HOH HOH . G 6 HOH A 31 531 52 HOH HOH . G 6 HOH A 32 532 53 HOH HOH . G 6 HOH A 33 533 54 HOH HOH . G 6 HOH A 34 534 55 HOH HOH . G 6 HOH A 35 535 56 HOH HOH . G 6 HOH A 36 536 57 HOH HOH . G 6 HOH A 37 537 58 HOH HOH . G 6 HOH A 38 538 59 HOH HOH . G 6 HOH A 39 539 60 HOH HOH . G 6 HOH A 40 540 61 HOH HOH . G 6 HOH A 41 541 62 HOH HOH . G 6 HOH A 42 542 63 HOH HOH . G 6 HOH A 43 543 64 HOH HOH . G 6 HOH A 44 544 65 HOH HOH . G 6 HOH A 45 545 66 HOH HOH . G 6 HOH A 46 546 67 HOH HOH . G 6 HOH A 47 547 68 HOH HOH . G 6 HOH A 48 548 69 HOH HOH . G 6 HOH A 49 549 70 HOH HOH . G 6 HOH A 50 550 71 HOH HOH . G 6 HOH A 51 551 72 HOH HOH . G 6 HOH A 52 552 73 HOH HOH . G 6 HOH A 53 553 74 HOH HOH . G 6 HOH A 54 554 75 HOH HOH . G 6 HOH A 55 555 76 HOH HOH . G 6 HOH A 56 556 77 HOH HOH . G 6 HOH A 57 557 78 HOH HOH . G 6 HOH A 58 558 79 HOH HOH . G 6 HOH A 59 559 80 HOH HOH . G 6 HOH A 60 560 81 HOH HOH . G 6 HOH A 61 561 82 HOH HOH . G 6 HOH A 62 562 83 HOH HOH . G 6 HOH A 63 563 84 HOH HOH . G 6 HOH A 64 564 85 HOH HOH . G 6 HOH A 65 565 86 HOH HOH . G 6 HOH A 66 566 87 HOH HOH . G 6 HOH A 67 567 88 HOH HOH . G 6 HOH A 68 568 89 HOH HOH . G 6 HOH A 69 569 90 HOH HOH . G 6 HOH A 70 570 91 HOH HOH . G 6 HOH A 71 571 93 HOH HOH . G 6 HOH A 72 572 95 HOH HOH . G 6 HOH A 73 573 96 HOH HOH . G 6 HOH A 74 574 98 HOH HOH . G 6 HOH A 75 575 99 HOH HOH . G 6 HOH A 76 576 100 HOH HOH . G 6 HOH A 77 577 101 HOH HOH . G 6 HOH A 78 578 102 HOH HOH . G 6 HOH A 79 579 103 HOH HOH . G 6 HOH A 80 580 104 HOH HOH . G 6 HOH A 81 581 105 HOH HOH . G 6 HOH A 82 582 106 HOH HOH . G 6 HOH A 83 583 107 HOH HOH . G 6 HOH A 84 584 108 HOH HOH . G 6 HOH A 85 585 109 HOH HOH . G 6 HOH A 86 586 110 HOH HOH . G 6 HOH A 87 587 111 HOH HOH . G 6 HOH A 88 588 112 HOH HOH . G 6 HOH A 89 589 113 HOH HOH . G 6 HOH A 90 590 114 HOH HOH . G 6 HOH A 91 591 116 HOH HOH . G 6 HOH A 92 592 119 HOH HOH . G 6 HOH A 93 593 120 HOH HOH . G 6 HOH A 94 594 121 HOH HOH . G 6 HOH A 95 595 122 HOH HOH . G 6 HOH A 96 596 123 HOH HOH . G 6 HOH A 97 597 126 HOH HOH . G 6 HOH A 98 598 128 HOH HOH . G 6 HOH A 99 599 130 HOH HOH . G 6 HOH A 100 600 131 HOH HOH . G 6 HOH A 101 601 133 HOH HOH . G 6 HOH A 102 602 135 HOH HOH . G 6 HOH A 103 603 136 HOH HOH . G 6 HOH A 104 604 137 HOH HOH . G 6 HOH A 105 605 139 HOH HOH . G 6 HOH A 106 606 142 HOH HOH . G 6 HOH A 107 607 143 HOH HOH . G 6 HOH A 108 608 144 HOH HOH . G 6 HOH A 109 609 147 HOH HOH . G 6 HOH A 110 610 157 HOH HOH . G 6 HOH A 111 611 168 HOH HOH . G 6 HOH A 112 612 169 HOH HOH . G 6 HOH A 113 613 170 HOH HOH . G 6 HOH A 114 614 171 HOH HOH . G 6 HOH A 115 615 172 HOH HOH . G 6 HOH A 116 616 173 HOH HOH . G 6 HOH A 117 617 174 HOH HOH . G 6 HOH A 118 618 175 HOH HOH . G 6 HOH A 119 619 176 HOH HOH . G 6 HOH A 120 620 177 HOH HOH . G 6 HOH A 121 621 178 HOH HOH . G 6 HOH A 122 622 179 HOH HOH . G 6 HOH A 123 623 180 HOH HOH . G 6 HOH A 124 624 181 HOH HOH . G 6 HOH A 125 625 182 HOH HOH . G 6 HOH A 126 626 183 HOH HOH . G 6 HOH A 127 627 184 HOH HOH . G 6 HOH A 128 628 185 HOH HOH . G 6 HOH A 129 629 186 HOH HOH . G 6 HOH A 130 630 187 HOH HOH . G 6 HOH A 131 631 188 HOH HOH . G 6 HOH A 132 632 189 HOH HOH . G 6 HOH A 133 633 190 HOH HOH . G 6 HOH A 134 634 192 HOH HOH . G 6 HOH A 135 635 193 HOH HOH . G 6 HOH A 136 636 194 HOH HOH . G 6 HOH A 137 637 195 HOH HOH . G 6 HOH A 138 638 196 HOH HOH . G 6 HOH A 139 639 197 HOH HOH . G 6 HOH A 140 640 198 HOH HOH . G 6 HOH A 141 641 199 HOH HOH . G 6 HOH A 142 642 200 HOH HOH . G 6 HOH A 143 643 201 HOH HOH . G 6 HOH A 144 644 202 HOH HOH . G 6 HOH A 145 645 203 HOH HOH . G 6 HOH A 146 646 204 HOH HOH . G 6 HOH A 147 647 205 HOH HOH . G 6 HOH A 148 648 206 HOH HOH . G 6 HOH A 149 649 207 HOH HOH . G 6 HOH A 150 650 208 HOH HOH . G 6 HOH A 151 651 209 HOH HOH . G 6 HOH A 152 652 210 HOH HOH . G 6 HOH A 153 653 211 HOH HOH . G 6 HOH A 154 654 212 HOH HOH . G 6 HOH A 155 655 213 HOH HOH . G 6 HOH A 156 656 214 HOH HOH . G 6 HOH A 157 657 215 HOH HOH . G 6 HOH A 158 658 216 HOH HOH . G 6 HOH A 159 659 218 HOH HOH . G 6 HOH A 160 660 219 HOH HOH . G 6 HOH A 161 661 220 HOH HOH . G 6 HOH A 162 662 221 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 ORO . . . C 3 3.596 46.067 4.806 1 11.81 ? N1 ORO 402 A 1 HETATM 2 C C2 ORO . . . C 3 4.541 45.2 5.163 1 11.26 ? C2 ORO 402 A 1 HETATM 3 O O2 ORO . . . C 3 5.097 44.581 4.243 1 11.54 ? O2 ORO 402 A 1 HETATM 4 N N3 ORO . . . C 3 4.874 45.018 6.451 1 10.81 ? N3 ORO 402 A 1 HETATM 5 C C4 ORO . . . C 3 4.228 45.733 7.397 1 11.43 ? C4 ORO 402 A 1 HETATM 6 O O4 ORO . . . C 3 4.506 45.549 8.583 1 10.91 ? O4 ORO 402 A 1 HETATM 7 C C5 ORO . . . C 3 3.223 46.663 7.067 1 11.66 ? C5 ORO 402 A 1 HETATM 8 C C6 ORO . . . C 3 2.933 46.784 5.716 1 12.62 ? C6 ORO 402 A 1 HETATM 9 C C7 ORO . . . C 3 1.967 47.78 5.19 1 13.86 ? C7 ORO 402 A 1 HETATM 10 O O71 ORO . . . C 3 2.407 48.487 4.249 1 14.7 ? O71 ORO 402 A 1 HETATM 11 O O72 ORO . . . C 3 0.848 47.952 5.708 1 14.82 ? O72 ORO 402 A 1 # _model_server_stats.io_time_ms 35 _model_server_stats.parse_time_ms 66 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 351 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 11 #