data_4RSR # _model_server_result.job_id 4PbjlwVxiOBhy7MpqX0m4Q _model_server_result.datetime_utc '2025-01-10 17:17:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rsr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":405}' # _entry.id 4RSR # _exptl.entry_id 4RSR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.07 _cell.angle_gamma 90 _cell.entry_id 4RSR _cell.length_a 85.156 _cell.length_b 46.406 _cell.length_c 100.255 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RSR _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 44 A CYS 44 1_555 A SG CYS 72 A CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc1 A O GLY 91 A GLY 91 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc2 A OG SER 102 A SER 102 1_555 F NA NA . A NA 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.052 ? metalc ? metalc3 A OD2 ASP 207 A ASP 207 1_555 E CA CA . A CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc4 A OE1 GLN 269 A GLN 269 1_555 E CA CA . A CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc5 A OE1 GLN 292 A GLN 292 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.701 ? metalc ? metalc6 A O VAL 320 A VAL 320 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.836 ? metalc ? metalc7 A OE2 GLU 367 A GLU 367 1_555 E CA CA . A CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? metalc ? metalc8 D CA CA . A CA 403 1_555 H O HOH . A HOH 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc9 D CA CA . A CA 403 1_555 H O HOH . A HOH 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc10 D CA CA . A CA 403 1_555 H O HOH . A HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? metalc ? metalc11 D CA CA . A CA 403 1_555 H O HOH . A HOH 616 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc12 D CA CA . A CA 403 1_555 H O HOH . A HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc13 D CA CA . A CA 403 1_555 H O HOH . A HOH 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc14 E CA CA . A CA 404 1_555 H O HOH . A HOH 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc15 F NA NA . A NA 405 1_555 H O HOH . A HOH 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4RSR _atom_sites.fract_transf_matrix[1][1] 0.011743 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005247 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021549 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010925 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RXO A 1 401 1 RXO RXO . C 3 MG A 1 402 2 MG MG . D 4 CA A 1 403 3 CA CA . E 4 CA A 1 404 4 CA CA . F 5 NA A 1 405 5 NA NA . G 6 DTT A 1 406 6 DTT DTT . H 7 HOH A 1 501 1 HOH HOH . H 7 HOH A 2 502 2 HOH HOH . H 7 HOH A 3 503 3 HOH HOH . H 7 HOH A 4 504 4 HOH HOH . H 7 HOH A 5 505 5 HOH HOH . H 7 HOH A 6 506 6 HOH HOH . H 7 HOH A 7 507 7 HOH HOH . H 7 HOH A 8 508 8 HOH HOH . H 7 HOH A 9 509 9 HOH HOH . H 7 HOH A 10 510 10 HOH HOH . H 7 HOH A 11 511 11 HOH HOH . H 7 HOH A 12 512 12 HOH HOH . H 7 HOH A 13 513 13 HOH HOH . H 7 HOH A 14 514 14 HOH HOH . H 7 HOH A 15 515 15 HOH HOH . H 7 HOH A 16 516 16 HOH HOH . H 7 HOH A 17 517 17 HOH HOH . H 7 HOH A 18 518 18 HOH HOH . H 7 HOH A 19 519 19 HOH HOH . H 7 HOH A 20 520 20 HOH HOH . H 7 HOH A 21 521 21 HOH HOH . H 7 HOH A 22 522 22 HOH HOH . H 7 HOH A 23 523 23 HOH HOH . H 7 HOH A 24 524 24 HOH HOH . H 7 HOH A 25 525 25 HOH HOH . H 7 HOH A 26 526 26 HOH HOH . H 7 HOH A 27 527 27 HOH HOH . H 7 HOH A 28 528 28 HOH HOH . H 7 HOH A 29 529 29 HOH HOH . H 7 HOH A 30 530 30 HOH HOH . H 7 HOH A 31 531 31 HOH HOH . H 7 HOH A 32 532 32 HOH HOH . H 7 HOH A 33 533 33 HOH HOH . H 7 HOH A 34 534 34 HOH HOH . H 7 HOH A 35 535 35 HOH HOH . H 7 HOH A 36 536 36 HOH HOH . H 7 HOH A 37 537 37 HOH HOH . H 7 HOH A 38 538 38 HOH HOH . H 7 HOH A 39 539 39 HOH HOH . H 7 HOH A 40 540 40 HOH HOH . H 7 HOH A 41 541 41 HOH HOH . H 7 HOH A 42 542 42 HOH HOH . H 7 HOH A 43 543 43 HOH HOH . H 7 HOH A 44 544 44 HOH HOH . H 7 HOH A 45 545 45 HOH HOH . H 7 HOH A 46 546 46 HOH HOH . H 7 HOH A 47 547 48 HOH HOH . H 7 HOH A 48 548 49 HOH HOH . H 7 HOH A 49 549 50 HOH HOH . H 7 HOH A 50 550 51 HOH HOH . H 7 HOH A 51 551 52 HOH HOH . H 7 HOH A 52 552 53 HOH HOH . H 7 HOH A 53 553 54 HOH HOH . H 7 HOH A 54 554 55 HOH HOH . H 7 HOH A 55 555 56 HOH HOH . H 7 HOH A 56 556 57 HOH HOH . H 7 HOH A 57 557 58 HOH HOH . H 7 HOH A 58 558 59 HOH HOH . H 7 HOH A 59 559 60 HOH HOH . H 7 HOH A 60 560 61 HOH HOH . H 7 HOH A 61 561 63 HOH HOH . H 7 HOH A 62 562 64 HOH HOH . H 7 HOH A 63 563 65 HOH HOH . H 7 HOH A 64 564 66 HOH HOH . H 7 HOH A 65 565 67 HOH HOH . H 7 HOH A 66 566 68 HOH HOH . H 7 HOH A 67 567 69 HOH HOH . H 7 HOH A 68 568 71 HOH HOH . H 7 HOH A 69 569 72 HOH HOH . H 7 HOH A 70 570 73 HOH HOH . H 7 HOH A 71 571 74 HOH HOH . H 7 HOH A 72 572 75 HOH HOH . H 7 HOH A 73 573 76 HOH HOH . H 7 HOH A 74 574 77 HOH HOH . H 7 HOH A 75 575 78 HOH HOH . H 7 HOH A 76 576 79 HOH HOH . H 7 HOH A 77 577 80 HOH HOH . H 7 HOH A 78 578 81 HOH HOH . H 7 HOH A 79 579 82 HOH HOH . H 7 HOH A 80 580 83 HOH HOH . H 7 HOH A 81 581 84 HOH HOH . H 7 HOH A 82 582 85 HOH HOH . H 7 HOH A 83 583 88 HOH HOH . H 7 HOH A 84 584 89 HOH HOH . H 7 HOH A 85 585 90 HOH HOH . H 7 HOH A 86 586 91 HOH HOH . H 7 HOH A 87 587 92 HOH HOH . H 7 HOH A 88 588 93 HOH HOH . H 7 HOH A 89 589 94 HOH HOH . H 7 HOH A 90 590 95 HOH HOH . H 7 HOH A 91 591 96 HOH HOH . H 7 HOH A 92 592 97 HOH HOH . H 7 HOH A 93 593 98 HOH HOH . H 7 HOH A 94 594 99 HOH HOH . H 7 HOH A 95 595 100 HOH HOH . H 7 HOH A 96 596 101 HOH HOH . H 7 HOH A 97 597 102 HOH HOH . H 7 HOH A 98 598 103 HOH HOH . H 7 HOH A 99 599 105 HOH HOH . H 7 HOH A 100 600 106 HOH HOH . H 7 HOH A 101 601 107 HOH HOH . H 7 HOH A 102 602 108 HOH HOH . H 7 HOH A 103 603 109 HOH HOH . H 7 HOH A 104 604 110 HOH HOH . H 7 HOH A 105 605 111 HOH HOH . H 7 HOH A 106 606 112 HOH HOH . H 7 HOH A 107 607 113 HOH HOH . H 7 HOH A 108 608 115 HOH HOH . H 7 HOH A 109 609 116 HOH HOH . H 7 HOH A 110 610 117 HOH HOH . H 7 HOH A 111 611 120 HOH HOH . H 7 HOH A 112 612 121 HOH HOH . H 7 HOH A 113 613 123 HOH HOH . H 7 HOH A 114 614 125 HOH HOH . H 7 HOH A 115 615 127 HOH HOH . H 7 HOH A 116 616 128 HOH HOH . H 7 HOH A 117 617 129 HOH HOH . H 7 HOH A 118 618 130 HOH HOH . H 7 HOH A 119 619 131 HOH HOH . H 7 HOH A 120 620 132 HOH HOH . H 7 HOH A 121 621 133 HOH HOH . H 7 HOH A 122 622 134 HOH HOH . H 7 HOH A 123 623 135 HOH HOH . H 7 HOH A 124 624 136 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 5 _atom_site.Cartn_x -13.173 _atom_site.Cartn_y -15.228 _atom_site.Cartn_z 3.995 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.91 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 405 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 82 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 1153 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 1 #