data_4RSZ # _model_server_result.job_id eollM3zwGY-NC-2comTi7g _model_server_result.datetime_utc '2024-10-10 23:36:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rsz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":204}' # _entry.id 4RSZ # _exptl.entry_id 4RSZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 16 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4RSZ _cell.length_a 120.344 _cell.length_b 120.344 _cell.length_c 36.673 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RSZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 143 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 ? monomeric 1 author_defined_assembly 5 ? monomeric 1 author_defined_assembly 6 PISA hexameric 6 software_defined_assembly 7 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,G,H,I,J,JA 1 1 B,K,L,M,N,O,P,KA 2 1 C,Q,R,S,T,U,LA 3 1 D,V,W,X,Y,MA 4 1 E,Z,AA,BA,CA,DA,NA 5 1 F,EA,FA,GA,HA,IA,OA 6 1 E,Z,AA,BA,CA,DA,NA 7 2 D,F,V,W,X,Y,EA,FA,GA,HA,IA,MA,OA 7 3 A,B,C,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,JA,KA,LA 7 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_344 -x+y-2,-x-1,z-1 -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -180.516 -104.220961 -36.673 3 'crystal symmetry operation' 1_554 x,y,z-1 1 0 0 0 1 0 0 0 1 0 0 -36.673 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 I N N ? 4 J N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 R N N ? 4 S N N ? 4 T N N ? 4 U N N ? 4 X N N ? 4 Y N N ? 4 BA N N ? 4 CA N N ? 4 DA N N ? 4 HA N N ? 4 IA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 14 A CYS 14 1_555 G CAB HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.769 ? covale ? covale2 A SG CYS 17 A CYS 17 1_555 G CAC HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.817 ? covale ? covale3 B SG CYS 14 B CYS 14 1_555 K CAB HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.653 ? covale ? covale4 B SG CYS 17 B CYS 17 1_555 K CAC HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.791 ? covale ? covale5 C SG CYS 14 C CYS 14 1_555 Q CAB HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.727 ? covale ? covale6 C SG CYS 17 C CYS 17 1_555 Q CAC HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.833 ? covale ? covale7 D SG CYS 14 D CYS 14 1_555 V CAB HEC . D HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.739 ? covale ? covale8 D SG CYS 17 D CYS 17 1_555 V CAC HEC . D HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.749 ? covale ? covale9 E SG CYS 14 E CYS 14 1_555 Z CAB HEC . E HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.681 ? covale ? covale10 E SG CYS 17 E CYS 17 1_555 Z CAC HEC . E HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.717 ? covale ? covale11 F SG CYS 14 F CYS 14 1_555 EA CAB HEC . F HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.756 ? covale ? covale12 F SG CYS 17 F CYS 17 1_555 EA CAC HEC . F HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.807 ? metalc ? metalc1 A NE2 HIS 18 A HIS 18 1_555 G FE HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? metalc ? metalc2 A OE2 GLU 61 A GLU 61 1_555 H PT1 CPT . A CPT 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.828 ? metalc ? metalc3 A SD MET 65 A MET 65 1_555 H PT1 CPT . A CPT 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc4 A SD MET 80 A MET 80 1_555 G FE HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc5 B NE2 HIS 18 B HIS 18 1_555 K FE HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.904 ? metalc ? metalc6 B SD MET 65 B MET 65 1_555 M PT1 CPT . B CPT 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc7 B SD MET 80 B MET 80 1_555 K FE HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc8 C NE2 HIS 18 C HIS 18 1_555 Q FE HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? metalc ? metalc9 C SD MET 80 C MET 80 1_555 Q FE HEC . C HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc10 D NE2 HIS 18 D HIS 18 1_555 V FE HEC . D HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.906 ? metalc ? metalc11 D SD MET 65 D MET 65 1_555 W PT1 CPT . D CPT 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc12 D SD MET 80 D MET 80 1_555 V FE HEC . D HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc13 E NE2 HIS 18 E HIS 18 1_555 Z FE HEC . E HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? metalc ? metalc14 E SD MET 65 E MET 65 1_555 AA PT1 CPT . E CPT 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc15 E SD MET 80 E MET 80 1_555 Z FE HEC . E HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc16 F NE2 HIS 18 F HIS 18 1_555 EA FE HEC . F HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.903 ? metalc ? metalc17 F OE2 GLU 61 F GLU 61 1_555 GA PT1 CPT . F CPT 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.826 ? metalc ? metalc18 F SD MET 65 F MET 65 1_555 GA PT1 CPT . F CPT 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc19 F SD MET 80 F MET 80 1_555 EA FE HEC . F HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 331 n n N O2 NO3 sing 332 n n N O3 NO3 sing 333 n n # _atom_sites.entry_id 4RSZ _atom_sites.fract_transf_matrix[1][1] 0.00831 _atom_sites.fract_transf_matrix[1][2] 0.004797 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009595 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027268 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 HEC A 1 201 105 HEC HEM . H 3 CPT A 1 202 7 CPT CPT . I 4 NO3 A 1 203 2 NO3 NO3 . J 4 NO3 A 1 204 6 NO3 NO3 . K 2 HEC B 1 201 105 HEC HEM . L 5 SO4 B 1 202 2 SO4 SO4 . M 3 CPT B 1 203 2 CPT CPT . N 4 NO3 B 1 204 7 NO3 NO3 . O 4 NO3 B 1 205 8 NO3 NO3 . P 4 NO3 B 1 206 9 NO3 NO3 . Q 2 HEC C 1 201 105 HEC HEM . R 4 NO3 C 1 202 1 NO3 NO3 . S 4 NO3 C 1 203 3 NO3 NO3 . T 4 NO3 C 1 204 13 NO3 NO3 . U 4 NO3 C 1 205 14 NO3 NO3 . V 2 HEC D 1 201 105 HEC HEM . W 3 CPT D 1 202 4 CPT CPT . X 4 NO3 D 1 203 5 NO3 NO3 . Y 4 NO3 D 1 204 10 NO3 NO3 . Z 2 HEC E 1 201 105 HEC HEM . AA 3 CPT E 1 202 5 CPT CPT . BA 4 NO3 E 1 203 11 NO3 NO3 . CA 4 NO3 E 1 204 12 NO3 NO3 . DA 4 NO3 E 1 205 15 NO3 NO3 . EA 2 HEC F 1 201 105 HEC HEM . FA 5 SO4 F 1 202 1 SO4 SO4 . GA 3 CPT F 1 203 1 CPT CPT . HA 4 NO3 F 1 204 4 NO3 NO3 . IA 4 NO3 F 1 205 16 NO3 NO3 . JA 6 HOH A 1 301 7 HOH HOH . JA 6 HOH A 2 302 14 HOH HOH . JA 6 HOH A 3 303 16 HOH HOH . JA 6 HOH A 4 304 17 HOH HOH . JA 6 HOH A 5 305 22 HOH HOH . JA 6 HOH A 6 306 28 HOH HOH . JA 6 HOH A 7 307 35 HOH HOH . JA 6 HOH A 8 308 44 HOH HOH . JA 6 HOH A 9 309 53 HOH HOH . JA 6 HOH A 10 310 75 HOH HOH . JA 6 HOH A 11 311 77 HOH HOH . JA 6 HOH A 12 312 79 HOH HOH . JA 6 HOH A 13 313 84 HOH HOH . JA 6 HOH A 14 314 96 HOH HOH . JA 6 HOH A 15 315 102 HOH HOH . JA 6 HOH A 16 316 104 HOH HOH . JA 6 HOH A 17 317 108 HOH HOH . JA 6 HOH A 18 318 112 HOH HOH . JA 6 HOH A 19 319 115 HOH HOH . JA 6 HOH A 20 320 118 HOH HOH . JA 6 HOH A 21 321 119 HOH HOH . JA 6 HOH A 22 322 138 HOH HOH . KA 6 HOH B 1 301 2 HOH HOH . KA 6 HOH B 2 302 8 HOH HOH . KA 6 HOH B 3 303 31 HOH HOH . KA 6 HOH B 4 304 34 HOH HOH . KA 6 HOH B 5 305 39 HOH HOH . KA 6 HOH B 6 306 45 HOH HOH . KA 6 HOH B 7 307 47 HOH HOH . KA 6 HOH B 8 308 54 HOH HOH . KA 6 HOH B 9 309 62 HOH HOH . KA 6 HOH B 10 310 63 HOH HOH . KA 6 HOH B 11 311 67 HOH HOH . KA 6 HOH B 12 312 72 HOH HOH . KA 6 HOH B 13 313 74 HOH HOH . KA 6 HOH B 14 314 76 HOH HOH . KA 6 HOH B 15 315 95 HOH HOH . KA 6 HOH B 16 316 99 HOH HOH . KA 6 HOH B 17 317 100 HOH HOH . KA 6 HOH B 18 318 107 HOH HOH . KA 6 HOH B 19 319 117 HOH HOH . KA 6 HOH B 20 320 123 HOH HOH . KA 6 HOH B 21 321 126 HOH HOH . KA 6 HOH B 22 322 128 HOH HOH . KA 6 HOH B 23 323 132 HOH HOH . KA 6 HOH B 24 324 135 HOH HOH . KA 6 HOH B 25 325 137 HOH HOH . KA 6 HOH B 26 326 142 HOH HOH . LA 6 HOH C 1 301 1 HOH HOH . LA 6 HOH C 2 302 10 HOH HOH . LA 6 HOH C 3 303 11 HOH HOH . LA 6 HOH C 4 304 15 HOH HOH . LA 6 HOH C 5 305 27 HOH HOH . LA 6 HOH C 6 306 29 HOH HOH . LA 6 HOH C 7 307 30 HOH HOH . LA 6 HOH C 8 308 32 HOH HOH . LA 6 HOH C 9 309 49 HOH HOH . LA 6 HOH C 10 310 50 HOH HOH . LA 6 HOH C 11 311 51 HOH HOH . LA 6 HOH C 12 312 58 HOH HOH . LA 6 HOH C 13 313 60 HOH HOH . LA 6 HOH C 14 314 68 HOH HOH . LA 6 HOH C 15 315 73 HOH HOH . LA 6 HOH C 16 316 86 HOH HOH . LA 6 HOH C 17 317 89 HOH HOH . LA 6 HOH C 18 318 94 HOH HOH . LA 6 HOH C 19 319 103 HOH HOH . LA 6 HOH C 20 320 110 HOH HOH . LA 6 HOH C 21 321 130 HOH HOH . LA 6 HOH C 22 322 131 HOH HOH . LA 6 HOH C 23 323 136 HOH HOH . LA 6 HOH C 24 324 139 HOH HOH . LA 6 HOH C 25 325 140 HOH HOH . MA 6 HOH D 1 301 13 HOH HOH . MA 6 HOH D 2 302 23 HOH HOH . MA 6 HOH D 3 303 25 HOH HOH . MA 6 HOH D 4 304 38 HOH HOH . MA 6 HOH D 5 305 46 HOH HOH . MA 6 HOH D 6 306 59 HOH HOH . MA 6 HOH D 7 307 64 HOH HOH . MA 6 HOH D 8 308 70 HOH HOH . MA 6 HOH D 9 309 78 HOH HOH . MA 6 HOH D 10 310 81 HOH HOH . MA 6 HOH D 11 311 93 HOH HOH . MA 6 HOH D 12 312 106 HOH HOH . MA 6 HOH D 13 313 109 HOH HOH . MA 6 HOH D 14 314 111 HOH HOH . MA 6 HOH D 15 315 114 HOH HOH . MA 6 HOH D 16 316 116 HOH HOH . MA 6 HOH D 17 317 120 HOH HOH . MA 6 HOH D 18 318 121 HOH HOH . MA 6 HOH D 19 319 125 HOH HOH . MA 6 HOH D 20 320 141 HOH HOH . NA 6 HOH E 1 301 3 HOH HOH . NA 6 HOH E 2 302 5 HOH HOH . NA 6 HOH E 3 303 6 HOH HOH . NA 6 HOH E 4 304 9 HOH HOH . NA 6 HOH E 5 305 18 HOH HOH . NA 6 HOH E 6 306 21 HOH HOH . NA 6 HOH E 7 307 24 HOH HOH . NA 6 HOH E 8 308 37 HOH HOH . NA 6 HOH E 9 309 42 HOH HOH . NA 6 HOH E 10 310 83 HOH HOH . NA 6 HOH E 11 311 87 HOH HOH . NA 6 HOH E 12 312 98 HOH HOH . NA 6 HOH E 13 313 113 HOH HOH . NA 6 HOH E 14 314 124 HOH HOH . NA 6 HOH E 15 315 129 HOH HOH . OA 6 HOH F 1 301 19 HOH HOH . OA 6 HOH F 2 302 20 HOH HOH . OA 6 HOH F 3 303 41 HOH HOH . OA 6 HOH F 4 304 43 HOH HOH . OA 6 HOH F 5 305 48 HOH HOH . OA 6 HOH F 6 306 55 HOH HOH . OA 6 HOH F 7 307 56 HOH HOH . OA 6 HOH F 8 308 57 HOH HOH . OA 6 HOH F 9 309 66 HOH HOH . OA 6 HOH F 10 310 69 HOH HOH . OA 6 HOH F 11 311 71 HOH HOH . OA 6 HOH F 12 312 80 HOH HOH . OA 6 HOH F 13 313 82 HOH HOH . OA 6 HOH F 14 314 85 HOH HOH . OA 6 HOH F 15 315 88 HOH HOH . OA 6 HOH F 16 316 105 HOH HOH . OA 6 HOH F 17 317 122 HOH HOH . OA 6 HOH F 18 318 127 HOH HOH . OA 6 HOH F 19 319 134 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . J 4 -85.602 8.926 13.103 1 29.31 ? N NO3 204 A 1 HETATM 2 O O1 NO3 . . . J 4 -85.606 9.424 14.22 1 31.57 ? O1 NO3 204 A 1 HETATM 3 O O2 NO3 . . . J 4 -84.434 8.38 12.605 1 27.14 ? O2 NO3 204 A 1 HETATM 4 O O3 NO3 . . . J 4 -86.792 8.895 12.394 1 33.43 ? O3 NO3 204 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 4 #