data_4RT0
#
_model_server_result.job_id            oszxCoM-VhGuy510SAkXpQ 
_model_server_result.datetime_utc      '2024-11-13 06:48:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4rt0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":203}' 
#
_entry.id    4RT0 
#
_exptl.entry_id    4RT0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4RT0 
_cell.length_a            57.253 
_cell.length_b            57.253 
_cell.length_c            178.35 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4RT0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,L 1 1,2 
B,C,F,G,H,I,J,K,M,N 2 1 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 118.9 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 J N N 
? 3 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C LYS 55 A LYS 68 1_555 A N MSE 56 A MSE 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 A C MSE 56 A MSE 69 1_555 A N LEU 57 A LEU 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale3 B C LYS 55 B LYS 68 1_555 B N MSE 56 B MSE 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale4 B C MSE 56 B MSE 69 1_555 B N LEU 57 B LEU 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale5 C C LYS 55 C LYS 68 1_555 C N MSE 56 C MSE 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale6 C C MSE 56 C MSE 69 1_555 C N LEU 57 C LEU 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 159 n n 
C1 C2 EDO sing 160 n n 
C1 H11 EDO sing 161 n n 
C1 H12 EDO sing 162 n n 
O1 HO1 EDO sing 163 n n 
C2 O2 EDO sing 164 n n 
C2 H21 EDO sing 165 n n 
C2 H22 EDO sing 166 n n 
O2 HO2 EDO sing 167 n n 
#
_atom_sites.entry_id                     4RT0 
_atom_sites.fract_transf_matrix[1][1]    0.017466 
_atom_sites.fract_transf_matrix[1][2]    0.010084 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020168 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005607 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 C2E A 1 201 1 C2E C2E . 
E 2 C2E A 1 202 2 C2E C2E . 
F 2 C2E B 1 201 3 C2E C2E . 
G 2 C2E B 1 202 4 C2E C2E . 
H 2 C2E C 1 201 5 C2E C2E . 
I 2 C2E C 1 202 6 C2E C2E . 
J 3 EDO C 1 203 1 EDO EDO . 
K 3 EDO C 1 204 2 EDO EDO . 
L 4 HOH A 1 301 1 HOH HOH . 
L 4 HOH A 2 302 2 HOH HOH . 
L 4 HOH A 3 303 3 HOH HOH . 
L 4 HOH A 4 304 5 HOH HOH . 
L 4 HOH A 5 305 12 HOH HOH . 
L 4 HOH A 6 306 14 HOH HOH . 
L 4 HOH A 7 307 18 HOH HOH . 
L 4 HOH A 8 308 20 HOH HOH . 
L 4 HOH A 9 309 23 HOH HOH . 
L 4 HOH A 10 310 27 HOH HOH . 
L 4 HOH A 11 311 35 HOH HOH . 
L 4 HOH A 12 312 37 HOH HOH . 
L 4 HOH A 13 313 41 HOH HOH . 
L 4 HOH A 14 314 45 HOH HOH . 
L 4 HOH A 15 315 46 HOH HOH . 
L 4 HOH A 16 316 47 HOH HOH . 
L 4 HOH A 17 317 48 HOH HOH . 
L 4 HOH A 18 318 49 HOH HOH . 
L 4 HOH A 19 319 54 HOH HOH . 
L 4 HOH A 20 320 55 HOH HOH . 
L 4 HOH A 21 321 58 HOH HOH . 
L 4 HOH A 22 322 61 HOH HOH . 
L 4 HOH A 23 323 63 HOH HOH . 
L 4 HOH A 24 324 66 HOH HOH . 
L 4 HOH A 25 325 67 HOH HOH . 
L 4 HOH A 26 326 68 HOH HOH . 
L 4 HOH A 27 327 69 HOH HOH . 
L 4 HOH A 28 328 76 HOH HOH . 
L 4 HOH A 29 329 77 HOH HOH . 
L 4 HOH A 30 330 78 HOH HOH . 
L 4 HOH A 31 331 80 HOH HOH . 
L 4 HOH A 32 332 81 HOH HOH . 
L 4 HOH A 33 333 84 HOH HOH . 
L 4 HOH A 34 334 86 HOH HOH . 
L 4 HOH A 35 335 91 HOH HOH . 
L 4 HOH A 36 336 92 HOH HOH . 
L 4 HOH A 37 337 95 HOH HOH . 
L 4 HOH A 38 338 97 HOH HOH . 
L 4 HOH A 39 339 100 HOH HOH . 
L 4 HOH A 40 340 103 HOH HOH . 
L 4 HOH A 41 341 113 HOH HOH . 
L 4 HOH A 42 342 115 HOH HOH . 
L 4 HOH A 43 343 117 HOH HOH . 
L 4 HOH A 44 344 119 HOH HOH . 
L 4 HOH A 45 345 129 HOH HOH . 
L 4 HOH A 46 346 130 HOH HOH . 
L 4 HOH A 47 347 132 HOH HOH . 
L 4 HOH A 48 348 140 HOH HOH . 
L 4 HOH A 49 349 143 HOH HOH . 
L 4 HOH A 50 350 148 HOH HOH . 
L 4 HOH A 51 351 150 HOH HOH . 
L 4 HOH A 52 352 157 HOH HOH . 
L 4 HOH A 53 353 159 HOH HOH . 
L 4 HOH A 54 354 161 HOH HOH . 
L 4 HOH A 55 355 162 HOH HOH . 
L 4 HOH A 56 356 163 HOH HOH . 
L 4 HOH A 57 357 167 HOH HOH . 
L 4 HOH A 58 358 168 HOH HOH . 
M 4 HOH B 1 301 4 HOH HOH . 
M 4 HOH B 2 302 8 HOH HOH . 
M 4 HOH B 3 303 11 HOH HOH . 
M 4 HOH B 4 304 16 HOH HOH . 
M 4 HOH B 5 305 19 HOH HOH . 
M 4 HOH B 6 306 24 HOH HOH . 
M 4 HOH B 7 307 25 HOH HOH . 
M 4 HOH B 8 308 26 HOH HOH . 
M 4 HOH B 9 309 28 HOH HOH . 
M 4 HOH B 10 310 29 HOH HOH . 
M 4 HOH B 11 311 30 HOH HOH . 
M 4 HOH B 12 312 33 HOH HOH . 
M 4 HOH B 13 313 36 HOH HOH . 
M 4 HOH B 14 314 38 HOH HOH . 
M 4 HOH B 15 315 39 HOH HOH . 
M 4 HOH B 16 316 42 HOH HOH . 
M 4 HOH B 17 317 43 HOH HOH . 
M 4 HOH B 18 318 44 HOH HOH . 
M 4 HOH B 19 319 50 HOH HOH . 
M 4 HOH B 20 320 51 HOH HOH . 
M 4 HOH B 21 321 53 HOH HOH . 
M 4 HOH B 22 322 56 HOH HOH . 
M 4 HOH B 23 323 57 HOH HOH . 
M 4 HOH B 24 324 60 HOH HOH . 
M 4 HOH B 25 325 62 HOH HOH . 
M 4 HOH B 26 326 70 HOH HOH . 
M 4 HOH B 27 327 72 HOH HOH . 
M 4 HOH B 28 328 79 HOH HOH . 
M 4 HOH B 29 329 82 HOH HOH . 
M 4 HOH B 30 330 83 HOH HOH . 
M 4 HOH B 31 331 85 HOH HOH . 
M 4 HOH B 32 332 89 HOH HOH . 
M 4 HOH B 33 333 94 HOH HOH . 
M 4 HOH B 34 334 96 HOH HOH . 
M 4 HOH B 35 335 102 HOH HOH . 
M 4 HOH B 36 336 104 HOH HOH . 
M 4 HOH B 37 337 107 HOH HOH . 
M 4 HOH B 38 338 108 HOH HOH . 
M 4 HOH B 39 339 109 HOH HOH . 
M 4 HOH B 40 340 112 HOH HOH . 
M 4 HOH B 41 341 114 HOH HOH . 
M 4 HOH B 42 342 118 HOH HOH . 
M 4 HOH B 43 343 120 HOH HOH . 
M 4 HOH B 44 344 122 HOH HOH . 
M 4 HOH B 45 345 123 HOH HOH . 
M 4 HOH B 46 346 124 HOH HOH . 
M 4 HOH B 47 347 125 HOH HOH . 
M 4 HOH B 48 348 126 HOH HOH . 
M 4 HOH B 49 349 128 HOH HOH . 
M 4 HOH B 50 350 131 HOH HOH . 
M 4 HOH B 51 351 135 HOH HOH . 
M 4 HOH B 52 352 136 HOH HOH . 
M 4 HOH B 53 353 137 HOH HOH . 
M 4 HOH B 54 354 138 HOH HOH . 
M 4 HOH B 55 355 139 HOH HOH . 
M 4 HOH B 56 356 141 HOH HOH . 
M 4 HOH B 57 357 144 HOH HOH . 
M 4 HOH B 58 358 145 HOH HOH . 
M 4 HOH B 59 359 146 HOH HOH . 
M 4 HOH B 60 360 149 HOH HOH . 
M 4 HOH B 61 361 151 HOH HOH . 
M 4 HOH B 62 362 154 HOH HOH . 
M 4 HOH B 63 363 155 HOH HOH . 
M 4 HOH B 64 364 156 HOH HOH . 
M 4 HOH B 65 365 158 HOH HOH . 
M 4 HOH B 66 366 165 HOH HOH . 
M 4 HOH B 67 367 166 HOH HOH . 
M 4 HOH B 68 368 169 HOH HOH . 
N 4 HOH C 1 301 6 HOH HOH . 
N 4 HOH C 2 302 7 HOH HOH . 
N 4 HOH C 3 303 9 HOH HOH . 
N 4 HOH C 4 304 10 HOH HOH . 
N 4 HOH C 5 305 13 HOH HOH . 
N 4 HOH C 6 306 15 HOH HOH . 
N 4 HOH C 7 307 17 HOH HOH . 
N 4 HOH C 8 308 21 HOH HOH . 
N 4 HOH C 9 309 22 HOH HOH . 
N 4 HOH C 10 310 31 HOH HOH . 
N 4 HOH C 11 311 32 HOH HOH . 
N 4 HOH C 12 312 34 HOH HOH . 
N 4 HOH C 13 313 40 HOH HOH . 
N 4 HOH C 14 314 52 HOH HOH . 
N 4 HOH C 15 315 59 HOH HOH . 
N 4 HOH C 16 316 64 HOH HOH . 
N 4 HOH C 17 317 65 HOH HOH . 
N 4 HOH C 18 318 71 HOH HOH . 
N 4 HOH C 19 319 73 HOH HOH . 
N 4 HOH C 20 320 74 HOH HOH . 
N 4 HOH C 21 321 75 HOH HOH . 
N 4 HOH C 22 322 87 HOH HOH . 
N 4 HOH C 23 323 88 HOH HOH . 
N 4 HOH C 24 324 90 HOH HOH . 
N 4 HOH C 25 325 93 HOH HOH . 
N 4 HOH C 26 326 98 HOH HOH . 
N 4 HOH C 27 327 99 HOH HOH . 
N 4 HOH C 28 328 101 HOH HOH . 
N 4 HOH C 29 329 105 HOH HOH . 
N 4 HOH C 30 330 106 HOH HOH . 
N 4 HOH C 31 331 110 HOH HOH . 
N 4 HOH C 32 332 111 HOH HOH . 
N 4 HOH C 33 333 116 HOH HOH . 
N 4 HOH C 34 334 121 HOH HOH . 
N 4 HOH C 35 335 127 HOH HOH . 
N 4 HOH C 36 336 133 HOH HOH . 
N 4 HOH C 37 337 134 HOH HOH . 
N 4 HOH C 38 338 142 HOH HOH . 
N 4 HOH C 39 339 152 HOH HOH . 
N 4 HOH C 40 340 153 HOH HOH . 
N 4 HOH C 41 341 160 HOH HOH . 
N 4 HOH C 42 342 164 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . J 3 40.309 19.481 99.448 1 48.01 ? C1 EDO 203 C 1 
HETATM 2 O O1 EDO . . . J 3 40.415 20.905 99.344 1 52.81 ? O1 EDO 203 C 1 
HETATM 3 C C2 EDO . . . J 3 41.502 18.794 98.799 1 55.15 ? C2 EDO 203 C 1 
HETATM 4 O O2 EDO . . . J 3 41.27 17.382 98.786 1 56.61 ? O2 EDO 203 C 1 
#
_model_server_stats.io_time_ms              61 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           4 
#