data_4RUD # _model_server_result.job_id U2RC4-CVMQFlJnhPqS-s9A _model_server_result.datetime_utc '2024-11-09 02:12:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rud # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":101}' # _entry.id 4RUD # _exptl.entry_id 4RUD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4RUD _cell.length_a 58.8 _cell.length_b 58.8 _cell.length_c 70.567 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RUD _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 A CYS 3 1_555 A SG CYS 20 A CYS 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 A SG CYS 13 A CYS 13 1_555 A SG CYS 38 A CYS 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 A SG CYS 42 A CYS 42 1_555 A SG CYS 50 A CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf4 A SG CYS 51 A CYS 51 1_555 A SG CYS 56 A CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf5 B SG CYS 3 B CYS 3 1_555 B SG CYS 20 B CYS 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf6 B SG CYS 13 B CYS 13 1_555 B SG CYS 38 B CYS 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf7 B SG CYS 42 B CYS 42 1_555 B SG CYS 50 B CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf8 B SG CYS 51 B CYS 51 1_555 B SG CYS 56 B CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc1 A NE2 HIS 29 A HIS 29 1_555 C ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc2 B NE2 HIS 29 B HIS 29 1_555 D ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4RUD _atom_sites.fract_transf_matrix[1][1] 0.017007 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017007 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014171 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 101 61 ZN ZN . D 2 ZN B 1 101 61 ZN ZN . E 3 HOH A 1 201 1 HOH HOH . E 3 HOH A 2 202 2 HOH HOH . E 3 HOH A 3 203 3 HOH HOH . E 3 HOH A 4 204 5 HOH HOH . E 3 HOH A 5 205 6 HOH HOH . E 3 HOH A 6 206 8 HOH HOH . E 3 HOH A 7 207 10 HOH HOH . E 3 HOH A 8 208 13 HOH HOH . E 3 HOH A 9 209 14 HOH HOH . E 3 HOH A 10 210 15 HOH HOH . E 3 HOH A 11 211 16 HOH HOH . E 3 HOH A 12 212 18 HOH HOH . E 3 HOH A 13 213 20 HOH HOH . E 3 HOH A 14 214 21 HOH HOH . E 3 HOH A 15 215 23 HOH HOH . E 3 HOH A 16 216 24 HOH HOH . E 3 HOH A 17 217 27 HOH HOH . E 3 HOH A 18 218 28 HOH HOH . E 3 HOH A 19 219 29 HOH HOH . E 3 HOH A 20 220 30 HOH HOH . E 3 HOH A 21 221 31 HOH HOH . E 3 HOH A 22 222 32 HOH HOH . E 3 HOH A 23 223 40 HOH HOH . E 3 HOH A 24 224 41 HOH HOH . E 3 HOH A 25 225 43 HOH HOH . E 3 HOH A 26 226 44 HOH HOH . E 3 HOH A 27 227 45 HOH HOH . E 3 HOH A 28 228 46 HOH HOH . E 3 HOH A 29 229 47 HOH HOH . E 3 HOH A 30 230 48 HOH HOH . E 3 HOH A 31 231 49 HOH HOH . E 3 HOH A 32 232 51 HOH HOH . E 3 HOH A 33 233 52 HOH HOH . E 3 HOH A 34 234 54 HOH HOH . E 3 HOH A 35 235 57 HOH HOH . E 3 HOH A 36 236 58 HOH HOH . E 3 HOH A 37 237 59 HOH HOH . E 3 HOH A 38 238 62 HOH HOH . E 3 HOH A 39 239 63 HOH HOH . E 3 HOH A 40 240 64 HOH HOH . E 3 HOH A 41 241 65 HOH HOH . E 3 HOH A 42 242 66 HOH HOH . E 3 HOH A 43 243 70 HOH HOH . E 3 HOH A 44 244 72 HOH HOH . E 3 HOH A 45 245 73 HOH HOH . E 3 HOH A 46 246 74 HOH HOH . E 3 HOH A 47 247 76 HOH HOH . E 3 HOH A 48 248 77 HOH HOH . E 3 HOH A 49 249 78 HOH HOH . E 3 HOH A 50 250 79 HOH HOH . E 3 HOH A 51 251 85 HOH HOH . E 3 HOH A 52 252 88 HOH HOH . E 3 HOH A 53 253 89 HOH HOH . E 3 HOH A 54 254 98 HOH HOH . E 3 HOH A 55 255 99 HOH HOH . E 3 HOH A 56 256 105 HOH HOH . E 3 HOH A 57 257 107 HOH HOH . E 3 HOH A 58 258 111 HOH HOH . E 3 HOH A 59 259 113 HOH HOH . E 3 HOH A 60 260 114 HOH HOH . E 3 HOH A 61 261 118 HOH HOH . E 3 HOH A 62 262 119 HOH HOH . E 3 HOH A 63 263 120 HOH HOH . E 3 HOH A 64 264 126 HOH HOH . E 3 HOH A 65 265 128 HOH HOH . E 3 HOH A 66 266 130 HOH HOH . E 3 HOH A 67 267 133 HOH HOH . E 3 HOH A 68 268 137 HOH HOH . E 3 HOH A 69 269 138 HOH HOH . E 3 HOH A 70 270 140 HOH HOH . E 3 HOH A 71 271 143 HOH HOH . E 3 HOH A 72 272 147 HOH HOH . E 3 HOH A 73 273 155 HOH HOH . F 3 HOH B 1 201 4 HOH HOH . F 3 HOH B 2 202 7 HOH HOH . F 3 HOH B 3 203 9 HOH HOH . F 3 HOH B 4 204 11 HOH HOH . F 3 HOH B 5 205 12 HOH HOH . F 3 HOH B 6 206 17 HOH HOH . F 3 HOH B 7 207 19 HOH HOH . F 3 HOH B 8 208 22 HOH HOH . F 3 HOH B 9 209 25 HOH HOH . F 3 HOH B 10 210 26 HOH HOH . F 3 HOH B 11 211 33 HOH HOH . F 3 HOH B 12 212 34 HOH HOH . F 3 HOH B 13 213 35 HOH HOH . F 3 HOH B 14 214 36 HOH HOH . F 3 HOH B 15 215 37 HOH HOH . F 3 HOH B 16 216 38 HOH HOH . F 3 HOH B 17 217 39 HOH HOH . F 3 HOH B 18 218 42 HOH HOH . F 3 HOH B 19 219 50 HOH HOH . F 3 HOH B 20 220 53 HOH HOH . F 3 HOH B 21 221 55 HOH HOH . F 3 HOH B 22 222 56 HOH HOH . F 3 HOH B 23 223 60 HOH HOH . F 3 HOH B 24 224 61 HOH HOH . F 3 HOH B 25 225 67 HOH HOH . F 3 HOH B 26 226 68 HOH HOH . F 3 HOH B 27 227 69 HOH HOH . F 3 HOH B 28 228 71 HOH HOH . F 3 HOH B 29 229 75 HOH HOH . F 3 HOH B 30 230 80 HOH HOH . F 3 HOH B 31 231 81 HOH HOH . F 3 HOH B 32 232 82 HOH HOH . F 3 HOH B 33 233 83 HOH HOH . F 3 HOH B 34 234 84 HOH HOH . F 3 HOH B 35 235 86 HOH HOH . F 3 HOH B 36 236 87 HOH HOH . F 3 HOH B 37 237 90 HOH HOH . F 3 HOH B 38 238 91 HOH HOH . F 3 HOH B 39 239 92 HOH HOH . F 3 HOH B 40 240 93 HOH HOH . F 3 HOH B 41 241 100 HOH HOH . F 3 HOH B 42 242 101 HOH HOH . F 3 HOH B 43 243 102 HOH HOH . F 3 HOH B 44 244 103 HOH HOH . F 3 HOH B 45 245 104 HOH HOH . F 3 HOH B 46 246 106 HOH HOH . F 3 HOH B 47 247 109 HOH HOH . F 3 HOH B 48 248 110 HOH HOH . F 3 HOH B 49 249 112 HOH HOH . F 3 HOH B 50 250 115 HOH HOH . F 3 HOH B 51 251 116 HOH HOH . F 3 HOH B 52 252 117 HOH HOH . F 3 HOH B 53 253 121 HOH HOH . F 3 HOH B 54 254 122 HOH HOH . F 3 HOH B 55 255 124 HOH HOH . F 3 HOH B 56 256 129 HOH HOH . F 3 HOH B 57 257 132 HOH HOH . F 3 HOH B 58 258 134 HOH HOH . F 3 HOH B 59 259 136 HOH HOH . F 3 HOH B 60 260 141 HOH HOH . F 3 HOH B 61 261 142 HOH HOH . F 3 HOH B 62 262 144 HOH HOH . F 3 HOH B 63 263 146 HOH HOH . F 3 HOH B 64 264 149 HOH HOH . F 3 HOH B 65 265 150 HOH HOH . F 3 HOH B 66 266 152 HOH HOH . F 3 HOH B 67 267 153 HOH HOH . F 3 HOH B 68 268 154 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 0 _atom_site.Cartn_y 29.4 _atom_site.Cartn_z 7.883 _atom_site.occupancy 0.25 _atom_site.B_iso_or_equiv 17.18 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 101 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #