data_4RW5 # _model_server_result.job_id lotCFOh7Q6HSZ9LcAM9iXw _model_server_result.datetime_utc '2024-11-05 05:04:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rw5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":305}' # _entry.id 4RW5 # _exptl.entry_id 4RW5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 144.211 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OCTANOIC ACID (CAPRYLIC ACID)' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.71 _cell.angle_gamma 90 _cell.entry_id 4RW5 _cell.length_a 49.761 _cell.length_b 49.341 _cell.length_c 56.152 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RW5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 74 A CYS 52 1_555 A SG CYS 80 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf2 A SG CYS 76 A CYS 54 1_555 A SG CYS 219 A CYS 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc1 B MG MG . A MG 301 1_555 F O1 OCA . A OCA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc2 A OE2 GLU 54 A GLU 32 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc3 A OD2 ASP 114 A ASP 92 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc4 A OD1 ASP 56 A ASP 34 1_555 B MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc5 B MG MG . A MG 301 1_555 G O HOH . A HOH 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? # _chem_comp.formula 'C8 H16 O2' _chem_comp.formula_weight 144.211 _chem_comp.id OCA _chem_comp.mon_nstd_flag . _chem_comp.name 'OCTANOIC ACID (CAPRYLIC ACID)' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4RW5 _atom_sites.fract_transf_matrix[1][1] 0.020096 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005653 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020267 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0185 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 301 280 MG MG . C 3 PLM A 1 302 1 PLM PLM . D 4 GOL A 1 303 1 GOL GOL . E 5 TDA A 1 304 1 TDA TDA . F 6 OCA A 1 305 1 OCA OCA . G 7 HOH A 1 401 1 HOH HOH . G 7 HOH A 2 402 2 HOH HOH . G 7 HOH A 3 403 3 HOH HOH . G 7 HOH A 4 404 4 HOH HOH . G 7 HOH A 5 405 5 HOH HOH . G 7 HOH A 6 406 6 HOH HOH . G 7 HOH A 7 407 7 HOH HOH . G 7 HOH A 8 408 8 HOH HOH . G 7 HOH A 9 409 9 HOH HOH . G 7 HOH A 10 410 10 HOH HOH . G 7 HOH A 11 411 11 HOH HOH . G 7 HOH A 12 412 12 HOH HOH . G 7 HOH A 13 413 13 HOH HOH . G 7 HOH A 14 414 14 HOH HOH . G 7 HOH A 15 415 15 HOH HOH . G 7 HOH A 16 416 16 HOH HOH . G 7 HOH A 17 417 17 HOH HOH . G 7 HOH A 18 418 18 HOH HOH . G 7 HOH A 19 419 19 HOH HOH . G 7 HOH A 20 420 20 HOH HOH . G 7 HOH A 21 421 21 HOH HOH . G 7 HOH A 22 422 22 HOH HOH . G 7 HOH A 23 423 23 HOH HOH . G 7 HOH A 24 424 24 HOH HOH . G 7 HOH A 25 425 25 HOH HOH . G 7 HOH A 26 426 26 HOH HOH . G 7 HOH A 27 427 27 HOH HOH . G 7 HOH A 28 428 28 HOH HOH . G 7 HOH A 29 429 29 HOH HOH . G 7 HOH A 30 430 30 HOH HOH . G 7 HOH A 31 431 31 HOH HOH . G 7 HOH A 32 432 32 HOH HOH . G 7 HOH A 33 433 33 HOH HOH . G 7 HOH A 34 434 34 HOH HOH . G 7 HOH A 35 435 35 HOH HOH . G 7 HOH A 36 436 36 HOH HOH . G 7 HOH A 37 437 37 HOH HOH . G 7 HOH A 38 438 38 HOH HOH . G 7 HOH A 39 439 40 HOH HOH . G 7 HOH A 40 440 41 HOH HOH . G 7 HOH A 41 441 42 HOH HOH . G 7 HOH A 42 442 43 HOH HOH . G 7 HOH A 43 443 44 HOH HOH . G 7 HOH A 44 444 45 HOH HOH . G 7 HOH A 45 445 46 HOH HOH . G 7 HOH A 46 446 47 HOH HOH . G 7 HOH A 47 447 48 HOH HOH . G 7 HOH A 48 448 49 HOH HOH . G 7 HOH A 49 449 50 HOH HOH . G 7 HOH A 50 450 51 HOH HOH . G 7 HOH A 51 451 52 HOH HOH . G 7 HOH A 52 452 53 HOH HOH . G 7 HOH A 53 453 55 HOH HOH . G 7 HOH A 54 454 56 HOH HOH . G 7 HOH A 55 455 57 HOH HOH . G 7 HOH A 56 456 58 HOH HOH . G 7 HOH A 57 457 59 HOH HOH . G 7 HOH A 58 458 60 HOH HOH . G 7 HOH A 59 459 61 HOH HOH . G 7 HOH A 60 460 62 HOH HOH . G 7 HOH A 61 461 63 HOH HOH . G 7 HOH A 62 462 64 HOH HOH . G 7 HOH A 63 463 65 HOH HOH . G 7 HOH A 64 464 66 HOH HOH . G 7 HOH A 65 465 67 HOH HOH . G 7 HOH A 66 466 68 HOH HOH . G 7 HOH A 67 467 69 HOH HOH . G 7 HOH A 68 468 70 HOH HOH . G 7 HOH A 69 469 71 HOH HOH . G 7 HOH A 70 470 72 HOH HOH . G 7 HOH A 71 471 73 HOH HOH . G 7 HOH A 72 472 74 HOH HOH . G 7 HOH A 73 473 76 HOH HOH . G 7 HOH A 74 474 77 HOH HOH . G 7 HOH A 75 475 78 HOH HOH . G 7 HOH A 76 476 79 HOH HOH . G 7 HOH A 77 477 80 HOH HOH . G 7 HOH A 78 478 81 HOH HOH . G 7 HOH A 79 479 82 HOH HOH . G 7 HOH A 80 480 83 HOH HOH . G 7 HOH A 81 481 84 HOH HOH . G 7 HOH A 82 482 85 HOH HOH . G 7 HOH A 83 483 86 HOH HOH . G 7 HOH A 84 484 87 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OCA . . . F 6 4.385 1.008 4.022 1 20 ? C1 OCA 305 A 1 HETATM 2 C C2 OCA . . . F 6 3.947 1.181 5.443 1 20 ? C2 OCA 305 A 1 HETATM 3 C C3 OCA . . . F 6 4.988 1.362 6.528 1 20 ? C3 OCA 305 A 1 HETATM 4 C C4 OCA . . . F 6 4.468 0.91 7.912 1 20 ? C4 OCA 305 A 1 HETATM 5 C C5 OCA . . . F 6 5.514 0.062 8.589 1 20 ? C5 OCA 305 A 1 HETATM 6 C C6 OCA . . . F 6 5.155 -0.972 9.621 1 20 ? C6 OCA 305 A 1 HETATM 7 C C7 OCA . . . F 6 6.401 -1.801 9.891 1 20 ? C7 OCA 305 A 1 HETATM 8 C C8 OCA . . . F 6 6.817 -2.471 8.628 1 20 ? C8 OCA 305 A 1 HETATM 9 O O1 OCA . . . F 6 5.556 0.994 3.705 1 20 ? O1 OCA 305 A 1 HETATM 10 O O2 OCA . . . F 6 3.459 0.916 3.201 1 20 ? O2 OCA 305 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #