data_4RW7 # _model_server_result.job_id YhP7dL0kyXb02FWrlI2Cgg _model_server_result.datetime_utc '2024-11-16 15:56:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rw7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 4RW7 # _exptl.entry_id 4RW7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 409.822 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2E)-3-(3-chloro-5-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}phenyl)prop-2-enenitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.87 _cell.angle_gamma 90 _cell.entry_id 4RW7 _cell.length_a 161.953 _cell.length_b 73.874 _cell.length_c 108.457 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RW7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H16 Cl N3 O4' _chem_comp.formula_weight 409.822 _chem_comp.id 3X6 _chem_comp.mon_nstd_flag . _chem_comp.name (2E)-3-(3-chloro-5-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}phenyl)prop-2-enenitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O15 C10 3X6 doub 1 n n C0P C0O 3X6 sing 2 n n C0P N0S 3X6 sing 3 n n C10 N0S 3X6 sing 4 n n C10 N11 3X6 sing 5 n n C0O O0B 3X6 sing 6 n n N0S C14 3X6 sing 7 n n N11 C12 3X6 sing 8 n n C14 C13 3X6 doub 9 n n O0B C05 3X6 sing 10 n n C00 C05 3X6 doub 11 n y C00 C01 3X6 sing 12 n y C12 C13 3X6 sing 13 n n C12 O17 3X6 doub 14 n n C05 C04 3X6 sing 15 n y C01 C02 3X6 doub 16 n y C04 O0A 3X6 sing 17 n n C04 C03 3X6 doub 18 n y C02 C03 3X6 sing 19 n y O0A C0C 3X6 sing 20 n n C0D C0C 3X6 doub 21 n y C0D C0E 3X6 sing 22 n y C0C C0H 3X6 sing 23 n y CL1 C0E 3X6 sing 24 n n C0E C0F 3X6 doub 25 n y C0H C0G 3X6 doub 26 n y C0F C0G 3X6 sing 27 n y C0G C0M 3X6 sing 28 n n C0M C0V 3X6 doub 29 e n C0V C0X 3X6 sing 30 n n C0X N0Z 3X6 trip 31 n n C13 H1 3X6 sing 32 n n C14 H2 3X6 sing 33 n n C00 H3 3X6 sing 34 n n C01 H4 3X6 sing 35 n n C02 H5 3X6 sing 36 n n C03 H6 3X6 sing 37 n n C0D H7 3X6 sing 38 n n C0F H8 3X6 sing 39 n n C0H H9 3X6 sing 40 n n C0M H10 3X6 sing 41 n n C0V H11 3X6 sing 42 n n C0O H12 3X6 sing 43 n n C0O H13 3X6 sing 44 n n C0P H14 3X6 sing 45 n n C0P H15 3X6 sing 46 n n N11 H16 3X6 sing 47 n n # _atom_sites.entry_id 4RW7 _atom_sites.fract_transf_matrix[1][1] 0.006175 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001074 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013537 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009359 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id 3X6 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 601 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id 3X6 _pdbx_nonpoly_scheme.auth_mon_id 532 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 3X6 . . . C 3 213.739 -32.014 32.119 1 48.63 ? C10 3X6 601 A 1 HETATM 2 C C12 3X6 . . . C 3 212.712 -33.33 33.902 1 46.5 ? C12 3X6 601 A 1 HETATM 3 C C13 3X6 . . . C 3 211.891 -32.164 34.245 1 51.67 ? C13 3X6 601 A 1 HETATM 4 C C14 3X6 . . . C 3 212.027 -31.017 33.533 1 46.16 ? C14 3X6 601 A 1 HETATM 5 C C00 3X6 . . . C 3 216.188 -27.66 33.898 1 32.23 ? C00 3X6 601 A 1 HETATM 6 C C01 3X6 . . . C 3 217.234 -27.16 34.703 1 34.37 ? C01 3X6 601 A 1 HETATM 7 C C02 3X6 . . . C 3 217.112 -27.152 36.111 1 34 ? C02 3X6 601 A 1 HETATM 8 C C03 3X6 . . . C 3 215.939 -27.649 36.72 1 37.15 ? C03 3X6 601 A 1 HETATM 9 C C04 3X6 . . . C 3 214.877 -28.155 35.923 1 36.21 ? C04 3X6 601 A 1 HETATM 10 C C05 3X6 . . . C 3 215.006 -28.162 34.509 1 33.04 ? C05 3X6 601 A 1 HETATM 11 O O0A 3X6 . . . C 3 213.707 -28.656 36.469 1 37.64 ? O0A 3X6 601 A 1 HETATM 12 C C0C 3X6 . . . C 3 212.788 -27.856 37.125 1 39.06 ? C0C 3X6 601 A 1 HETATM 13 C C0D 3X6 . . . C 3 212.676 -26.452 36.923 1 50.65 ? C0D 3X6 601 A 1 HETATM 14 C C0E 3X6 . . . C 3 211.712 -25.703 37.625 1 54.06 ? C0E 3X6 601 A 1 HETATM 15 C C0F 3X6 . . . C 3 210.845 -26.338 38.532 1 51.02 ? C0F 3X6 601 A 1 HETATM 16 C C0G 3X6 . . . C 3 210.914 -27.735 38.771 1 45.7 ? C0G 3X6 601 A 1 HETATM 17 C C0H 3X6 . . . C 3 211.902 -28.479 38.045 1 41.04 ? C0H 3X6 601 A 1 HETATM 18 CL CL1 3X6 . . . C 3 211.599 -24.005 37.368 1 57.98 ? CL1 3X6 601 A 1 HETATM 19 C C0M 3X6 . . . C 3 209.97 -28.309 39.724 1 48.83 ? C0M 3X6 601 A 1 HETATM 20 C C0V 3X6 . . . C 3 210.23 -29.454 40.394 1 44.86 ? C0V 3X6 601 A 1 HETATM 21 C C0X 3X6 . . . C 3 209.425 -29.84 41.506 1 51.29 ? C0X 3X6 601 A 1 HETATM 22 N N0Z 3X6 . . . C 3 208.772 -30.125 42.419 1 52.6 ? N0Z 3X6 601 A 1 HETATM 23 O O0B 3X6 . . . C 3 213.949 -28.657 33.777 1 36.82 ? O0B 3X6 601 A 1 HETATM 24 C C0O 3X6 . . . C 3 214.166 -28.816 32.377 1 44.25 ? C0O 3X6 601 A 1 HETATM 25 C C0P 3X6 . . . C 3 213.03 -29.648 31.759 1 45.72 ? C0P 3X6 601 A 1 HETATM 26 N N0S 3X6 . . . C 3 212.955 -30.942 32.462 1 46.95 ? N0S 3X6 601 A 1 HETATM 27 N N11 3X6 . . . C 3 213.564 -33.138 32.862 1 49.61 ? N11 3X6 601 A 1 HETATM 28 O O15 3X6 . . . C 3 214.555 -31.986 31.198 1 45.85 ? O15 3X6 601 A 1 HETATM 29 O O17 3X6 . . . C 3 212.651 -34.402 34.493 1 43.6 ? O17 3X6 601 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 369 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 29 #