data_4RWA # _model_server_result.job_id mX4d93oAqamQ9grWr9B8uw _model_server_result.datetime_utc '2025-02-28 21:39:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rwa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1201}' # _entry.id 4RWA # _exptl.entry_id 4RWA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.21 _cell.angle_gamma 90 _cell.entry_id 4RWA _cell.length_a 160.549 _cell.length_b 86.121 _cell.length_c 94.684 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RWA _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F 1 1 B,C 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 194 A CYS 121 1_555 A SG CYS 271 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf2 B SG CYS 194 B CYS 121 1_555 B SG CYS 271 B CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? covale ? covale1 C C DI7 1 G DI7 1 1_555 C N DI8 2 G DI8 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 sing covale ? covale2 C C DI8 2 G DI8 2 1_555 C N PHE 3 G PHE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 sing covale ? covale3 C C PHE 4 G PHE 4 1_555 C N NH2 5 G NH2 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 sing covale ? covale4 D C DI7 1 H DI7 1 1_555 D N DI8 2 H DI8 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.357 sing covale ? covale5 D C DI8 2 H DI8 2 1_555 D N PHE 3 H PHE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 sing covale ? covale6 D C PHE 4 H PHE 4 1_555 D N NH2 5 H NH2 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 sing # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 294 n n C10 C9 OLC doub 295 n n C10 C11 OLC sing 296 n n C9 C8 OLC sing 297 n n C17 C16 OLC sing 298 z n C11 C12 OLC sing 299 n n C8 C7 OLC sing 300 n n C24 C22 OLC sing 301 n n C24 O25 OLC sing 302 n n C16 C15 OLC sing 303 n n C12 C13 OLC sing 304 n n C7 C6 OLC sing 305 n n C15 C14 OLC sing 306 n n C13 C14 OLC sing 307 n n C6 C5 OLC sing 308 n n C5 C4 OLC sing 309 n n C4 C3 OLC sing 310 n n C3 C2 OLC sing 311 n n C2 C1 OLC sing 312 n n C21 C22 OLC sing 313 n n C21 O20 OLC sing 314 n n C1 O19 OLC doub 315 n n C1 O20 OLC sing 316 n n C22 O23 OLC sing 317 n n C18 H18 OLC sing 318 n n C18 H18A OLC sing 319 n n C18 H18B OLC sing 320 n n C10 H10 OLC sing 321 n n C9 H9 OLC sing 322 n n C17 H17 OLC sing 323 n n C17 H17A OLC sing 324 n n C11 H11 OLC sing 325 n n C11 H11A OLC sing 326 n n C8 H8 OLC sing 327 n n C8 H8A OLC sing 328 n n C24 H24 OLC sing 329 n n C24 H24A OLC sing 330 n n C16 H16 OLC sing 331 n n C16 H16A OLC sing 332 n n C12 H12 OLC sing 333 n n C12 H12A OLC sing 334 n n C7 H7 OLC sing 335 n n C7 H7A OLC sing 336 n n C15 H15 OLC sing 337 n n C15 H15A OLC sing 338 n n C13 H13 OLC sing 339 n n C13 H13A OLC sing 340 n n C6 H6 OLC sing 341 n n C6 H6A OLC sing 342 n n C14 H14 OLC sing 343 n n C14 H14A OLC sing 344 n n C5 H5 OLC sing 345 n n C5 H5A OLC sing 346 n n C4 H4 OLC sing 347 n n C4 H4A OLC sing 348 n n C3 H3 OLC sing 349 n n C3 H3A OLC sing 350 n n C2 H2 OLC sing 351 n n C2 H2A OLC sing 352 n n C21 H21 OLC sing 353 n n C21 H21A OLC sing 354 n n C22 H22 OLC sing 355 n n O25 HO25 OLC sing 356 n n O23 HO23 OLC sing 357 n n # _atom_sites.entry_id 4RWA _atom_sites.fract_transf_matrix[1][1] 0.006229 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00024 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011612 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010569 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 OLC A 1 1201 1 OLC OLC . F 4 HOH A 1 1301 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C24 OLC . . . E 3 -31.978 10.158 45.314 1 96.45 ? C24 OLC 1201 A 1 HETATM 2 C C6 OLC . . . E 3 -38.593 6.858 39.382 1 94.89 ? C6 OLC 1201 A 1 HETATM 3 C C5 OLC . . . E 3 -37.746 7.45 40.507 1 96.55 ? C5 OLC 1201 A 1 HETATM 4 C C4 OLC . . . E 3 -36.333 6.852 40.576 1 95.41 ? C4 OLC 1201 A 1 HETATM 5 C C3 OLC . . . E 3 -35.947 6.4 41.994 1 96.29 ? C3 OLC 1201 A 1 HETATM 6 C C2 OLC . . . E 3 -34.618 6.955 42.515 1 94.98 ? C2 OLC 1201 A 1 HETATM 7 C C21 OLC . . . E 3 -33.982 8.669 45.803 1 94.34 ? C21 OLC 1201 A 1 HETATM 8 C C1 OLC . . . E 3 -34.59 7.009 44.031 1 95.19 ? C1 OLC 1201 A 1 HETATM 9 C C22 OLC . . . E 3 -32.805 9.449 46.391 1 93.91 ? C22 OLC 1201 A 1 HETATM 10 O O19 OLC . . . E 3 -35.4 6.397 44.703 1 99.4 ? O19 OLC 1201 A 1 HETATM 11 O O25 OLC . . . E 3 -30.992 11.033 45.9 1 95.71 ? O25 OLC 1201 A 1 HETATM 12 O O23 OLC . . . E 3 -33.321 10.421 47.306 1 91.48 ? O23 OLC 1201 A 1 HETATM 13 O O20 OLC . . . E 3 -33.589 7.803 44.735 1 99.27 ? O20 OLC 1201 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #