data_4RWB # _model_server_result.job_id pZZTv0B2a7jOasbjWx54-w _model_server_result.datetime_utc '2025-01-10 11:26:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rwb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 4RWB # _exptl.entry_id 4RWB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.68 _cell.angle_gamma 90 _cell.entry_id 4RWB _cell.length_a 40.93 _cell.length_b 41.23 _cell.length_c 27.93 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RWB _symmetry.cell_setting ? _symmetry.Int_Tables_number 14 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21/c 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ACE 1 A ACE 24 1_555 A N PRO 2 A PRO 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale2 A C LEU 23 A LEU 46 1_555 A N NH2 24 A NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 B C ACE 1 B ACE 24 1_555 B N PRO 2 B PRO 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 B C LEU 23 B LEU 46 1_555 B N NH2 24 B NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id MPG _chem_comp.mon_nstd_flag . _chem_comp.name '[(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 MPG sing 134 n n C2 C1 MPG sing 135 n n C3 C4 MPG sing 136 n n C4 C5 MPG sing 137 n n C5 C6 MPG sing 138 n n C6 C7 MPG sing 139 n n C7 C8 MPG sing 140 n n C8 C9 MPG sing 141 n n C9 C10 MPG doub 142 z n C10 C11 MPG sing 143 n n C11 C12 MPG sing 144 n n C12 C13 MPG sing 145 n n C13 C14 MPG sing 146 n n C14 C15 MPG sing 147 n n C15 C16 MPG sing 148 n n C16 C17 MPG sing 149 n n C17 C18 MPG sing 150 n n O1 C1 MPG sing 151 n n O1 CX3 MPG sing 152 n n CXD O2 MPG sing 153 n n CXD C21 MPG sing 154 n n CXD CX3 MPG sing 155 n n C21 O3 MPG sing 156 n n C2 H21C MPG sing 157 n n C2 H22C MPG sing 158 n n C3 H31C MPG sing 159 n n C3 H32C MPG sing 160 n n CX3 O4 MPG doub 161 n n C4 H41C MPG sing 162 n n C4 H42C MPG sing 163 n n C5 H51C MPG sing 164 n n C5 H52C MPG sing 165 n n C6 H61C MPG sing 166 n n C6 H62C MPG sing 167 n n C7 H71C MPG sing 168 n n C7 H72C MPG sing 169 n n C8 H81C MPG sing 170 n n C8 H82C MPG sing 171 n n C9 H9 MPG sing 172 n n C10 H10 MPG sing 173 n n C11 H111 MPG sing 174 n n C11 H112 MPG sing 175 n n C12 H121 MPG sing 176 n n C12 H122 MPG sing 177 n n C13 H131 MPG sing 178 n n C13 H132 MPG sing 179 n n C14 H141 MPG sing 180 n n C14 H142 MPG sing 181 n n C15 H151 MPG sing 182 n n C15 H152 MPG sing 183 n n C16 H161 MPG sing 184 n n C16 H162 MPG sing 185 n n C17 H171 MPG sing 186 n n C17 H172 MPG sing 187 n n C18 H181 MPG sing 188 n n C18 H182 MPG sing 189 n n C18 H183 MPG sing 190 n n C1 HX31 MPG sing 191 n n C1 HX32 MPG sing 192 n n CXD HXD MPG sing 193 n n O2 H2 MPG sing 194 n n C21 H211 MPG sing 195 n n C21 H212 MPG sing 196 n n O3 H3 MPG sing 197 n n # _atom_sites.entry_id 4RWB _atom_sites.fract_transf_matrix[1][1] 0.024432 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002429 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024254 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.03598 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MPG A 1 101 1 MPG MPG . D 2 MPG A 1 102 2 MPG MPG . E 2 MPG B 1 101 3 MPG MPG . F 3 HOH A 1 201 2 HOH HOH . G 3 HOH B 1 201 1 HOH HOH . G 3 HOH B 2 202 3 HOH HOH . G 3 HOH B 3 203 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 MPG . . . C 2 10.374 -7.254 6.043 1 56.54 ? C2 MPG 101 A 1 HETATM 2 C C3 MPG . . . C 2 10.32 -5.942 6.803 1 51.56 ? C3 MPG 101 A 1 HETATM 3 C C4 MPG . . . C 2 9.09 -5.959 7.691 1 52.3 ? C4 MPG 101 A 1 HETATM 4 C C5 MPG . . . C 2 7.86 -5.559 6.901 1 51.73 ? C5 MPG 101 A 1 HETATM 5 C C6 MPG . . . C 2 6.562 -6.217 7.352 1 49.75 ? C6 MPG 101 A 1 HETATM 6 C C7 MPG . . . C 2 5.651 -6.424 6.131 1 53.27 ? C7 MPG 101 A 1 HETATM 7 C C8 MPG . . . C 2 4.131 -6.293 6.4 1 55.6 ? C8 MPG 101 A 1 HETATM 8 C C9 MPG . . . C 2 3.46 -5.659 5.2 1 53.22 ? C9 MPG 101 A 1 HETATM 9 C C10 MPG . . . C 2 2.195 -5.222 5.143 1 45.4 ? C10 MPG 101 A 1 HETATM 10 C C11 MPG . . . C 2 1.199 -5.318 6.242 1 42.45 ? C11 MPG 101 A 1 HETATM 11 C C12 MPG . . . C 2 -0.086 -5.753 5.548 1 41.13 ? C12 MPG 101 A 1 HETATM 12 C C13 MPG . . . C 2 -1.101 -4.643 5.306 1 39.47 ? C13 MPG 101 A 1 HETATM 13 C C14 MPG . . . C 2 -2.415 -5.244 4.777 1 36.67 ? C14 MPG 101 A 1 HETATM 14 C C15 MPG . . . C 2 -3.459 -4.176 4.459 1 36.3 ? C15 MPG 101 A 1 HETATM 15 C C16 MPG . . . C 2 -4.881 -4.727 4.56 1 36.87 ? C16 MPG 101 A 1 HETATM 16 C C17 MPG . . . C 2 -5.972 -3.722 4.143 1 34.78 ? C17 MPG 101 A 1 HETATM 17 C C18 MPG . . . C 2 -7.359 -4.342 4.14 1 35.53 ? C18 MPG 101 A 1 HETATM 18 O O1 MPG . . . C 2 12.655 -7.904 6.495 1 69.36 ? O1 MPG 101 A 1 HETATM 19 C C1 MPG . . . C 2 11.751 -7.536 5.444 1 63.78 ? C1 MPG 101 A 1 HETATM 20 C CXD MPG . . . C 2 14.925 -8.086 5.238 1 85.83 ? CXD MPG 101 A 1 HETATM 21 O O2 MPG . . . C 2 14.349 -8.435 3.97 1 92.27 ? O2 MPG 101 A 1 HETATM 22 C C21 MPG . . . C 2 16.33 -8.681 5.387 1 91.22 ? C21 MPG 101 A 1 HETATM 23 O O3 MPG . . . C 2 17.12 -7.818 6.221 1 95.64 ? O3 MPG 101 A 1 HETATM 24 O O4 MPG . . . C 2 14.348 -9.313 7.184 1 77.61 ? O4 MPG 101 A 1 HETATM 25 C CX3 MPG . . . C 2 13.992 -8.49 6.348 1 78.09 ? CX3 MPG 101 A 1 HETATM 26 H H21C MPG . . . C 2 10.133 -8.072 6.722 1 56.66 ? H21C MPG 101 A 1 HETATM 27 H H22C MPG . . . C 2 9.615 -7.257 5.263 1 56.85 ? H22C MPG 101 A 1 HETATM 28 H H31C MPG . . . C 2 10.269 -5.105 6.103 1 52.87 ? H31C MPG 101 A 1 HETATM 29 H H32C MPG . . . C 2 11.218 -5.825 7.413 1 52.93 ? H32C MPG 101 A 1 HETATM 30 H H41C MPG . . . C 2 9.233 -5.255 8.509 1 51.99 ? H41C MPG 101 A 1 HETATM 31 H H42C MPG . . . C 2 8.953 -6.949 8.13 1 52.02 ? H42C MPG 101 A 1 HETATM 32 H H51C MPG . . . C 2 8.027 -5.783 5.846 1 51.45 ? H51C MPG 101 A 1 HETATM 33 H H52C MPG . . . C 2 7.741 -4.476 6.979 1 51.4 ? H52C MPG 101 A 1 HETATM 34 H H61C MPG . . . C 2 6.067 -5.581 8.088 1 51.03 ? H61C MPG 101 A 1 HETATM 35 H H62C MPG . . . C 2 6.768 -7.181 7.82 1 51.03 ? H62C MPG 101 A 1 HETATM 36 H H71C MPG . . . C 2 5.851 -7.401 5.693 1 52.94 ? H71C MPG 101 A 1 HETATM 37 H H72C MPG . . . C 2 5.925 -5.684 5.377 1 52.93 ? H72C MPG 101 A 1 HETATM 38 H H81C MPG . . . C 2 3.954 -5.681 7.287 1 54.34 ? H81C MPG 101 A 1 HETATM 39 H H82C MPG . . . C 2 3.702 -7.281 6.574 1 53.83 ? H82C MPG 101 A 1 HETATM 40 H H9 MPG . . . C 2 4.056 -5.519 4.314 1 51.72 ? H9 MPG 101 A 1 HETATM 41 H H10 MPG . . . C 2 1.869 -4.788 4.212 1 46.41 ? H10 MPG 101 A 1 HETATM 42 H H111 MPG . . . C 2 1.499 -6.056 6.988 1 42.86 ? H111 MPG 101 A 1 HETATM 43 H H112 MPG . . . C 2 1.067 -4.349 6.728 1 42.81 ? H112 MPG 101 A 1 HETATM 44 H H121 MPG . . . C 2 0.15 -6.226 4.592 1 41 ? H121 MPG 101 A 1 HETATM 45 H H122 MPG . . . C 2 -0.561 -6.518 6.164 1 40.67 ? H122 MPG 101 A 1 HETATM 46 H H131 MPG . . . C 2 -1.29 -4.107 6.239 1 39.17 ? H131 MPG 101 A 1 HETATM 47 H H132 MPG . . . C 2 -0.703 -3.932 4.58 1 39.17 ? H132 MPG 101 A 1 HETATM 48 H H141 MPG . . . C 2 -2.207 -5.822 3.874 1 37.22 ? H141 MPG 101 A 1 HETATM 49 H H142 MPG . . . C 2 -2.82 -5.931 5.523 1 37.22 ? H142 MPG 101 A 1 HETATM 50 H H151 MPG . . . C 2 -3.345 -3.341 5.154 1 36.54 ? H151 MPG 101 A 1 HETATM 51 H H152 MPG . . . C 2 -3.29 -3.796 3.45 1 36.53 ? H152 MPG 101 A 1 HETATM 52 H H161 MPG . . . C 2 -4.96 -5.616 3.931 1 36.23 ? H161 MPG 101 A 1 HETATM 53 H H162 MPG . . . C 2 -5.065 -5.041 5.59 1 36.23 ? H162 MPG 101 A 1 HETATM 54 H H171 MPG . . . C 2 -5.958 -2.864 4.815 1 35.13 ? H171 MPG 101 A 1 HETATM 55 H H172 MPG . . . C 2 -5.747 -3.353 3.14 1 35.38 ? H172 MPG 101 A 1 HETATM 56 H H181 MPG . . . C 2 -8.04 -3.681 3.67 1 35.3 ? H181 MPG 101 A 1 HETATM 57 H H182 MPG . . . C 2 -7.669 -4.52 5.136 1 35.3 ? H182 MPG 101 A 1 HETATM 58 H H183 MPG . . . C 2 -7.334 -5.259 3.609 1 35.3 ? H183 MPG 101 A 1 HETATM 59 H HX31 MPG . . . C 2 11.674 -8.324 4.7 1 63.23 ? HX31 MPG 101 A 1 HETATM 60 H HX32 MPG . . . C 2 12.109 -6.646 4.938 1 63.23 ? HX32 MPG 101 A 1 HETATM 61 H HXD MPG . . . C 2 15.063 -7.005 5.284 1 86.5 ? HXD MPG 101 A 1 HETATM 62 H H2 MPG . . . C 2 15.207 -8.991 4.234 0 85.74 ? H2 MPG 101 A 1 HETATM 63 H H211 MPG . . . C 2 16.286 -9.682 5.821 1 90.81 ? H211 MPG 101 A 1 HETATM 64 H H212 MPG . . . C 2 16.798 -8.763 4.404 1 90.91 ? H212 MPG 101 A 1 HETATM 65 H H3 MPG . . . C 2 17.036 -6.384 6.427 0 95.39 ? H3 MPG 101 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 489 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 65 #