data_4RWD # _model_server_result.job_id pli2NoiO4k9OUR7rVIl1ug _model_server_result.datetime_utc '2025-02-28 21:58:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rwd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":1202}' # _entry.id 4RWD # _exptl.entry_id 4RWD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.3 _cell.angle_gamma 90 _cell.entry_id 4RWD _cell.length_a 156.23 _cell.length_b 89.29 _cell.length_c 96.42 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RWD _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I,J,Q,T 1 1 B,C,K,L,M,N,O,P,R,S 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 194 A CYS 121 1_555 A SG CYS 271 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 B SG CYS 194 B CYS 121 1_555 B SG CYS 271 B CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? covale ? covale1 C C DI7 1 G DI7 1 1_555 C N DI8 2 G DI8 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 sing covale ? covale2 C C DI8 2 G DI8 2 1_555 C N PHE 3 G PHE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 sing covale ? covale3 C C PHE 4 G PHE 4 1_555 C N NH2 5 G NH2 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 sing covale ? covale4 D C DI7 1 H DI7 1 1_555 D N DI8 2 H DI8 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 sing covale ? covale5 D C DI8 2 H DI8 2 1_555 D N PHE 3 H PHE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 sing covale ? covale6 D C PHE 4 H PHE 4 1_555 D N NH2 5 H NH2 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 sing metalc ? metalc1 A OD1 ASP 168 A ASP 95 1_555 F NA NA . A NA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc2 A OD1 ASN 204 A ASN 131 1_555 F NA NA . A NA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? metalc ? metalc3 A OG SER 208 A SER 135 1_555 F NA NA . A NA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc4 F NA NA . A NA 1202 1_555 Q O HOH . A HOH 1309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc5 B OD1 ASP 168 B ASP 95 1_555 L NA NA . B NA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc6 B OD1 ASN 204 B ASN 131 1_555 L NA NA . B NA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc7 B OG SER 208 B SER 135 1_555 L NA NA . B NA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc8 L NA NA . B NA 1202 1_555 R O HOH . B HOH 1313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4RWD _atom_sites.fract_transf_matrix[1][1] 0.006401 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000257 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011199 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01038 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 OLA A 1 1201 1201 OLA OLA . F 4 NA A 1 1202 1202 NA NA . G 3 OLA A 1 1203 1203 OLA OLA . H 5 OLC A 1 1204 1204 OLC OLC . I 5 OLC A 1 1205 1205 OLC OLC . J 3 OLA A 1 1206 1206 OLA OLA . K 3 OLA B 1 1201 1201 OLA OLA . L 4 NA B 1 1202 1202 NA NA . M 3 OLA B 1 1203 1203 OLA OLA . N 3 OLA B 1 1204 1204 OLA OLA . O 5 OLC B 1 1205 1205 OLC OLC . P 3 OLA B 1 1206 1206 OLA OLA . Q 6 HOH A 1 1301 1301 HOH HOH . Q 6 HOH A 2 1302 1302 HOH HOH . Q 6 HOH A 3 1303 1303 HOH HOH . Q 6 HOH A 4 1304 1304 HOH HOH . Q 6 HOH A 5 1305 1305 HOH HOH . Q 6 HOH A 6 1306 1306 HOH HOH . Q 6 HOH A 7 1307 1307 HOH HOH . Q 6 HOH A 8 1308 1308 HOH HOH . Q 6 HOH A 9 1309 1309 HOH HOH . Q 6 HOH A 10 1310 1310 HOH HOH . Q 6 HOH A 11 1311 1311 HOH HOH . R 6 HOH B 1 1301 1301 HOH HOH . R 6 HOH B 2 1302 1302 HOH HOH . R 6 HOH B 3 1303 1303 HOH HOH . R 6 HOH B 4 1304 1304 HOH HOH . R 6 HOH B 5 1305 1305 HOH HOH . R 6 HOH B 6 1306 1306 HOH HOH . R 6 HOH B 7 1307 1307 HOH HOH . R 6 HOH B 8 1308 1308 HOH HOH . R 6 HOH B 9 1309 1309 HOH HOH . R 6 HOH B 10 1310 1310 HOH HOH . R 6 HOH B 11 1311 1311 HOH HOH . R 6 HOH B 12 1312 1312 HOH HOH . R 6 HOH B 13 1313 1313 HOH HOH . R 6 HOH B 14 1314 1314 HOH HOH . S 6 HOH G 1 101 101 HOH HOH . T 6 HOH H 1 101 101 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 4 _atom_site.Cartn_x -43.835 _atom_site.Cartn_y 24.198 _atom_site.Cartn_z 2.367 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 62.13 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 1202 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #