data_4RWD
#
_model_server_result.job_id            KtYo788w5eaGneqdIJb3zg 
_model_server_result.datetime_utc      '2024-10-28 02:28:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4rwd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":1205}' 
#
_entry.id    4RWD 
#
_exptl.entry_id    4RWD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.3 
_cell.angle_gamma         90 
_cell.entry_id            4RWD 
_cell.length_a            156.23 
_cell.length_b            89.29 
_cell.length_c            96.42 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4RWD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 software_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,H,I,J,Q,T 1 1 
B,C,K,L,M,N,O,P,R,S 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 H N N 
? 5 I N N 
? 5 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 194 A CYS 121 1_555 A SG CYS 271 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf2 B SG CYS 194 B CYS 121 1_555 B SG CYS 271 B CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
covale ? covale1 C C DI7 1 G DI7 1 1_555 C N DI8 2 G DI8 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 sing 
covale ? covale2 C C DI8 2 G DI8 2 1_555 C N PHE 3 G PHE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 sing 
covale ? covale3 C C PHE 4 G PHE 4 1_555 C N NH2 5 G NH2 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 sing 
covale ? covale4 D C DI7 1 H DI7 1 1_555 D N DI8 2 H DI8 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 sing 
covale ? covale5 D C DI8 2 H DI8 2 1_555 D N PHE 3 H PHE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 sing 
covale ? covale6 D C PHE 4 H PHE 4 1_555 D N NH2 5 H NH2 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 sing 
metalc ? metalc1 A OD1 ASP 168 A ASP 95 1_555 F NA NA . A NA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? 
metalc ? metalc2 A OD1 ASN 204 A ASN 131 1_555 F NA NA . A NA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? 
metalc ? metalc3 A OG SER 208 A SER 135 1_555 F NA NA . A NA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? 
metalc ? metalc4 F NA NA . A NA 1202 1_555 Q O HOH . A HOH 1309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? 
metalc ? metalc5 B OD1 ASP 168 B ASP 95 1_555 L NA NA . B NA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc6 B OD1 ASN 204 B ASN 131 1_555 L NA NA . B NA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? 
metalc ? metalc7 B OG SER 208 B SER 135 1_555 L NA NA . B NA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? 
metalc ? metalc8 L NA NA . B NA 1202 1_555 R O HOH . B HOH 1313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 347 n n 
C10 C9 OLC doub 348 n n 
C10 C11 OLC sing 349 n n 
C9 C8 OLC sing 350 n n 
C17 C16 OLC sing 351 z n 
C11 C12 OLC sing 352 n n 
C8 C7 OLC sing 353 n n 
C24 C22 OLC sing 354 n n 
C24 O25 OLC sing 355 n n 
C16 C15 OLC sing 356 n n 
C12 C13 OLC sing 357 n n 
C7 C6 OLC sing 358 n n 
C15 C14 OLC sing 359 n n 
C13 C14 OLC sing 360 n n 
C6 C5 OLC sing 361 n n 
C5 C4 OLC sing 362 n n 
C4 C3 OLC sing 363 n n 
C3 C2 OLC sing 364 n n 
C2 C1 OLC sing 365 n n 
C21 C22 OLC sing 366 n n 
C21 O20 OLC sing 367 n n 
C1 O19 OLC doub 368 n n 
C1 O20 OLC sing 369 n n 
C22 O23 OLC sing 370 n n 
C18 H18 OLC sing 371 n n 
C18 H18A OLC sing 372 n n 
C18 H18B OLC sing 373 n n 
C10 H10 OLC sing 374 n n 
C9 H9 OLC sing 375 n n 
C17 H17 OLC sing 376 n n 
C17 H17A OLC sing 377 n n 
C11 H11 OLC sing 378 n n 
C11 H11A OLC sing 379 n n 
C8 H8 OLC sing 380 n n 
C8 H8A OLC sing 381 n n 
C24 H24 OLC sing 382 n n 
C24 H24A OLC sing 383 n n 
C16 H16 OLC sing 384 n n 
C16 H16A OLC sing 385 n n 
C12 H12 OLC sing 386 n n 
C12 H12A OLC sing 387 n n 
C7 H7 OLC sing 388 n n 
C7 H7A OLC sing 389 n n 
C15 H15 OLC sing 390 n n 
C15 H15A OLC sing 391 n n 
C13 H13 OLC sing 392 n n 
C13 H13A OLC sing 393 n n 
C6 H6 OLC sing 394 n n 
C6 H6A OLC sing 395 n n 
C14 H14 OLC sing 396 n n 
C14 H14A OLC sing 397 n n 
C5 H5 OLC sing 398 n n 
C5 H5A OLC sing 399 n n 
C4 H4 OLC sing 400 n n 
C4 H4A OLC sing 401 n n 
C3 H3 OLC sing 402 n n 
C3 H3A OLC sing 403 n n 
C2 H2 OLC sing 404 n n 
C2 H2A OLC sing 405 n n 
C21 H21 OLC sing 406 n n 
C21 H21A OLC sing 407 n n 
C22 H22 OLC sing 408 n n 
O25 HO25 OLC sing 409 n n 
O23 HO23 OLC sing 410 n n 
#
_atom_sites.entry_id                     4RWD 
_atom_sites.fract_transf_matrix[1][1]    0.006401 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000257 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011199 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01038 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 OLA A 1 1201 1201 OLA OLA . 
F 4 NA A 1 1202 1202 NA NA . 
G 3 OLA A 1 1203 1203 OLA OLA . 
H 5 OLC A 1 1204 1204 OLC OLC . 
I 5 OLC A 1 1205 1205 OLC OLC . 
J 3 OLA A 1 1206 1206 OLA OLA . 
K 3 OLA B 1 1201 1201 OLA OLA . 
L 4 NA B 1 1202 1202 NA NA . 
M 3 OLA B 1 1203 1203 OLA OLA . 
N 3 OLA B 1 1204 1204 OLA OLA . 
O 5 OLC B 1 1205 1205 OLC OLC . 
P 3 OLA B 1 1206 1206 OLA OLA . 
Q 6 HOH A 1 1301 1301 HOH HOH . 
Q 6 HOH A 2 1302 1302 HOH HOH . 
Q 6 HOH A 3 1303 1303 HOH HOH . 
Q 6 HOH A 4 1304 1304 HOH HOH . 
Q 6 HOH A 5 1305 1305 HOH HOH . 
Q 6 HOH A 6 1306 1306 HOH HOH . 
Q 6 HOH A 7 1307 1307 HOH HOH . 
Q 6 HOH A 8 1308 1308 HOH HOH . 
Q 6 HOH A 9 1309 1309 HOH HOH . 
Q 6 HOH A 10 1310 1310 HOH HOH . 
Q 6 HOH A 11 1311 1311 HOH HOH . 
R 6 HOH B 1 1301 1301 HOH HOH . 
R 6 HOH B 2 1302 1302 HOH HOH . 
R 6 HOH B 3 1303 1303 HOH HOH . 
R 6 HOH B 4 1304 1304 HOH HOH . 
R 6 HOH B 5 1305 1305 HOH HOH . 
R 6 HOH B 6 1306 1306 HOH HOH . 
R 6 HOH B 7 1307 1307 HOH HOH . 
R 6 HOH B 8 1308 1308 HOH HOH . 
R 6 HOH B 9 1309 1309 HOH HOH . 
R 6 HOH B 10 1310 1310 HOH HOH . 
R 6 HOH B 11 1311 1311 HOH HOH . 
R 6 HOH B 12 1312 1312 HOH HOH . 
R 6 HOH B 13 1313 1313 HOH HOH . 
R 6 HOH B 14 1314 1314 HOH HOH . 
S 6 HOH G 1 101 101 HOH HOH . 
T 6 HOH H 1 101 101 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C24 OLC . . . O 5 -52.794 30.8 -9.516 1 69.04 ? C24 OLC 1205 B 1 
HETATM 2 C C6 OLC . . . O 5 -44.41 34.616 -9.254 1 75.15 ? C6 OLC 1205 B 1 
HETATM 3 C C5 OLC . . . O 5 -44.33 33.109 -9.035 1 73.99 ? C5 OLC 1205 B 1 
HETATM 4 C C4 OLC . . . O 5 -45.725 32.505 -8.911 1 74.03 ? C4 OLC 1205 B 1 
HETATM 5 C C3 OLC . . . O 5 -46.397 32.955 -7.618 1 74.9 ? C3 OLC 1205 B 1 
HETATM 6 C C2 OLC . . . O 5 -47.795 33.525 -7.845 1 75.33 ? C2 OLC 1205 B 1 
HETATM 7 C C21 OLC . . . O 5 -50.956 32.448 -9.009 1 74.29 ? C21 OLC 1205 B 1 
HETATM 8 C C1 OLC . . . O 5 -48.852 32.459 -7.721 1 78.1 ? C1 OLC 1205 B 1 
HETATM 9 C C22 OLC . . . O 5 -52.349 31.971 -8.642 1 71.53 ? C22 OLC 1205 B 1 
HETATM 10 O O19 OLC . . . O 5 -48.55 31.292 -7.555 1 86.03 ? O19 OLC 1205 B 1 
HETATM 11 O O25 OLC . . . O 5 -54.165 30.969 -9.869 1 68.62 ? O25 OLC 1205 B 1 
HETATM 12 O O23 OLC . . . O 5 -52.298 31.596 -7.267 1 74.89 ? O23 OLC 1205 B 1 
HETATM 13 O O20 OLC . . . O 5 -50.261 32.802 -7.815 1 76.34 ? O20 OLC 1205 B 1 
#
_model_server_stats.io_time_ms              157 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           368 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           13 
#