data_4RX9 # _model_server_result.job_id YtrvAz3S_LJlCuztICS9BA _model_server_result.datetime_utc '2024-11-18 19:36:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4rx9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":702}' # _entry.id 4RX9 # _exptl.entry_id 4RX9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 393.446 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-{[(1R,2S)-2-aminocyclohexyl]amino}-4-{[3-(2H-1,2,3-triazol-2-yl)phenyl]amino}pyrimidine-5-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4RX9 _cell.length_a 39.978 _cell.length_b 85.126 _cell.length_c 89.776 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4RX9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H23 N9 O' _chem_comp.formula_weight 393.446 _chem_comp.id 3YT _chem_comp.mon_nstd_flag . _chem_comp.name 2-{[(1R,2S)-2-aminocyclohexyl]amino}-4-{[3-(2H-1,2,3-triazol-2-yl)phenyl]amino}pyrimidine-5-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C6 3YT sing 1 n n C5 C4 3YT sing 2 n n C6 C7 3YT sing 3 n n C27 N28 3YT doub 4 n y C27 C26 3YT sing 5 n y C4 C3 3YT sing 6 n n N28 N24 3YT sing 7 n y C26 N25 3YT doub 8 n y C7 N8 3YT sing 9 n n C7 C2 3YT sing 10 n n N24 N25 3YT sing 11 n y N24 C22 3YT sing 12 n n N8 C9 3YT sing 13 n n C3 C2 3YT sing 14 n n C2 N1 3YT sing 15 n n C9 N29 3YT doub 16 n y C9 N10 3YT sing 17 n y C22 C23 3YT doub 18 n y C22 C21 3YT sing 19 n y C23 C18 3YT sing 20 n y N29 C16 3YT sing 21 n y N10 C11 3YT doub 22 n y C21 C20 3YT doub 23 n y C16 N17 3YT sing 24 n n C16 C12 3YT doub 25 n y C18 N17 3YT sing 26 n n C18 C19 3YT doub 27 n y C11 C12 3YT sing 28 n y C12 C13 3YT sing 29 n n C20 C19 3YT sing 30 n y C13 N14 3YT sing 31 n n C13 O15 3YT doub 32 n n C2 H1 3YT sing 33 n n C3 H2 3YT sing 34 n n C3 H3 3YT sing 35 n n C11 H4 3YT sing 36 n n C19 H5 3YT sing 37 n n C20 H6 3YT sing 38 n n C21 H7 3YT sing 39 n n C23 H8 3YT sing 40 n n C26 H9 3YT sing 41 n n C27 H10 3YT sing 42 n n N1 H11 3YT sing 43 n n N1 H12 3YT sing 44 n n C4 H14 3YT sing 45 n n C4 H15 3YT sing 46 n n C5 H16 3YT sing 47 n n C5 H17 3YT sing 48 n n C6 H18 3YT sing 49 n n C6 H19 3YT sing 50 n n C7 H20 3YT sing 51 n n N8 H21 3YT sing 52 n n N14 H22 3YT sing 53 n n N14 H23 3YT sing 54 n n N17 H24 3YT sing 55 n n # _atom_sites.entry_id 4RX9 _atom_sites.fract_transf_matrix[1][1] 0.025014 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011747 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011139 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 701 1 GOL GOL . C 3 3YT A 1 702 1 3YT LI1 . D 4 HOH A 1 801 1 HOH HOH . D 4 HOH A 2 802 2 HOH HOH . D 4 HOH A 3 803 3 HOH HOH . D 4 HOH A 4 804 4 HOH HOH . D 4 HOH A 5 805 5 HOH HOH . D 4 HOH A 6 806 6 HOH HOH . D 4 HOH A 7 807 7 HOH HOH . D 4 HOH A 8 808 8 HOH HOH . D 4 HOH A 9 809 9 HOH HOH . D 4 HOH A 10 810 10 HOH HOH . D 4 HOH A 11 811 11 HOH HOH . D 4 HOH A 12 812 12 HOH HOH . D 4 HOH A 13 813 13 HOH HOH . D 4 HOH A 14 814 14 HOH HOH . D 4 HOH A 15 815 15 HOH HOH . D 4 HOH A 16 816 16 HOH HOH . D 4 HOH A 17 817 17 HOH HOH . D 4 HOH A 18 818 18 HOH HOH . D 4 HOH A 19 819 19 HOH HOH . D 4 HOH A 20 820 20 HOH HOH . D 4 HOH A 21 821 21 HOH HOH . D 4 HOH A 22 822 22 HOH HOH . D 4 HOH A 23 823 23 HOH HOH . D 4 HOH A 24 824 24 HOH HOH . D 4 HOH A 25 825 25 HOH HOH . D 4 HOH A 26 826 26 HOH HOH . D 4 HOH A 27 827 27 HOH HOH . D 4 HOH A 28 828 28 HOH HOH . D 4 HOH A 29 829 29 HOH HOH . D 4 HOH A 30 830 30 HOH HOH . D 4 HOH A 31 831 31 HOH HOH . D 4 HOH A 32 832 32 HOH HOH . D 4 HOH A 33 833 33 HOH HOH . D 4 HOH A 34 834 34 HOH HOH . D 4 HOH A 35 835 35 HOH HOH . D 4 HOH A 36 836 36 HOH HOH . D 4 HOH A 37 837 37 HOH HOH . D 4 HOH A 38 838 38 HOH HOH . D 4 HOH A 39 839 39 HOH HOH . D 4 HOH A 40 840 40 HOH HOH . D 4 HOH A 41 841 41 HOH HOH . D 4 HOH A 42 842 42 HOH HOH . D 4 HOH A 43 843 43 HOH HOH . D 4 HOH A 44 844 44 HOH HOH . D 4 HOH A 45 845 45 HOH HOH . D 4 HOH A 46 846 46 HOH HOH . D 4 HOH A 47 847 47 HOH HOH . D 4 HOH A 48 848 48 HOH HOH . D 4 HOH A 49 849 49 HOH HOH . D 4 HOH A 50 850 50 HOH HOH . D 4 HOH A 51 851 51 HOH HOH . D 4 HOH A 52 852 52 HOH HOH . D 4 HOH A 53 853 53 HOH HOH . D 4 HOH A 54 854 54 HOH HOH . D 4 HOH A 55 855 55 HOH HOH . D 4 HOH A 56 856 56 HOH HOH . D 4 HOH A 57 857 57 HOH HOH . D 4 HOH A 58 858 58 HOH HOH . D 4 HOH A 59 859 59 HOH HOH . D 4 HOH A 60 860 60 HOH HOH . D 4 HOH A 61 861 61 HOH HOH . D 4 HOH A 62 862 62 HOH HOH . D 4 HOH A 63 863 63 HOH HOH . D 4 HOH A 64 864 64 HOH HOH . D 4 HOH A 65 865 65 HOH HOH . D 4 HOH A 66 866 66 HOH HOH . D 4 HOH A 67 867 67 HOH HOH . D 4 HOH A 68 868 68 HOH HOH . D 4 HOH A 69 869 69 HOH HOH . D 4 HOH A 70 870 70 HOH HOH . D 4 HOH A 71 871 71 HOH HOH . D 4 HOH A 72 872 72 HOH HOH . D 4 HOH A 73 873 73 HOH HOH . D 4 HOH A 74 874 74 HOH HOH . D 4 HOH A 75 875 75 HOH HOH . D 4 HOH A 76 876 76 HOH HOH . D 4 HOH A 77 877 77 HOH HOH . D 4 HOH A 78 878 78 HOH HOH . D 4 HOH A 79 879 79 HOH HOH . D 4 HOH A 80 880 80 HOH HOH . D 4 HOH A 81 881 81 HOH HOH . D 4 HOH A 82 882 82 HOH HOH . D 4 HOH A 83 883 83 HOH HOH . D 4 HOH A 84 884 84 HOH HOH . D 4 HOH A 85 885 85 HOH HOH . D 4 HOH A 86 886 86 HOH HOH . D 4 HOH A 87 887 87 HOH HOH . D 4 HOH A 88 888 88 HOH HOH . D 4 HOH A 89 889 89 HOH HOH . D 4 HOH A 90 890 90 HOH HOH . D 4 HOH A 91 891 91 HOH HOH . D 4 HOH A 92 892 92 HOH HOH . D 4 HOH A 93 893 93 HOH HOH . D 4 HOH A 94 894 94 HOH HOH . D 4 HOH A 95 895 95 HOH HOH . D 4 HOH A 96 896 96 HOH HOH . D 4 HOH A 97 897 97 HOH HOH . D 4 HOH A 98 898 98 HOH HOH . D 4 HOH A 99 899 99 HOH HOH . D 4 HOH A 100 900 100 HOH HOH . D 4 HOH A 101 901 101 HOH HOH . D 4 HOH A 102 902 102 HOH HOH . D 4 HOH A 103 903 103 HOH HOH . D 4 HOH A 104 904 104 HOH HOH . D 4 HOH A 105 905 105 HOH HOH . D 4 HOH A 106 906 106 HOH HOH . D 4 HOH A 107 907 107 HOH HOH . D 4 HOH A 108 908 108 HOH HOH . D 4 HOH A 109 909 109 HOH HOH . D 4 HOH A 110 910 110 HOH HOH . D 4 HOH A 111 911 111 HOH HOH . D 4 HOH A 112 912 112 HOH HOH . D 4 HOH A 113 913 113 HOH HOH . D 4 HOH A 114 914 114 HOH HOH . D 4 HOH A 115 915 115 HOH HOH . D 4 HOH A 116 916 116 HOH HOH . D 4 HOH A 117 917 117 HOH HOH . D 4 HOH A 118 918 118 HOH HOH . D 4 HOH A 119 919 119 HOH HOH . D 4 HOH A 120 920 120 HOH HOH . D 4 HOH A 121 921 121 HOH HOH . D 4 HOH A 122 922 122 HOH HOH . D 4 HOH A 123 923 123 HOH HOH . D 4 HOH A 124 924 124 HOH HOH . D 4 HOH A 125 925 125 HOH HOH . D 4 HOH A 126 926 126 HOH HOH . D 4 HOH A 127 927 127 HOH HOH . D 4 HOH A 128 928 128 HOH HOH . D 4 HOH A 129 929 129 HOH HOH . D 4 HOH A 130 930 130 HOH HOH . D 4 HOH A 131 931 131 HOH HOH . D 4 HOH A 132 932 132 HOH HOH . D 4 HOH A 133 933 133 HOH HOH . D 4 HOH A 134 934 134 HOH HOH . D 4 HOH A 135 935 135 HOH HOH . D 4 HOH A 136 936 136 HOH HOH . D 4 HOH A 137 937 137 HOH HOH . D 4 HOH A 138 938 138 HOH HOH . D 4 HOH A 139 939 139 HOH HOH . D 4 HOH A 140 940 140 HOH HOH . D 4 HOH A 141 941 141 HOH HOH . D 4 HOH A 142 942 142 HOH HOH . D 4 HOH A 143 943 143 HOH HOH . D 4 HOH A 144 944 144 HOH HOH . D 4 HOH A 145 945 145 HOH HOH . D 4 HOH A 146 946 146 HOH HOH . D 4 HOH A 147 947 147 HOH HOH . D 4 HOH A 148 948 148 HOH HOH . D 4 HOH A 149 949 149 HOH HOH . D 4 HOH A 150 950 150 HOH HOH . D 4 HOH A 151 951 151 HOH HOH . D 4 HOH A 152 952 152 HOH HOH . D 4 HOH A 153 953 153 HOH HOH . D 4 HOH A 154 954 154 HOH HOH . D 4 HOH A 155 955 155 HOH HOH . D 4 HOH A 156 956 156 HOH HOH . D 4 HOH A 157 957 157 HOH HOH . D 4 HOH A 158 958 158 HOH HOH . D 4 HOH A 159 959 159 HOH HOH . D 4 HOH A 160 960 160 HOH HOH . D 4 HOH A 161 961 161 HOH HOH . D 4 HOH A 162 962 162 HOH HOH . D 4 HOH A 163 963 163 HOH HOH . D 4 HOH A 164 964 164 HOH HOH . D 4 HOH A 165 965 165 HOH HOH . D 4 HOH A 166 966 166 HOH HOH . D 4 HOH A 167 967 167 HOH HOH . D 4 HOH A 168 968 168 HOH HOH . D 4 HOH A 169 969 169 HOH HOH . D 4 HOH A 170 970 170 HOH HOH . D 4 HOH A 171 971 171 HOH HOH . D 4 HOH A 172 972 172 HOH HOH . D 4 HOH A 173 973 173 HOH HOH . D 4 HOH A 174 974 174 HOH HOH . D 4 HOH A 175 975 175 HOH HOH . D 4 HOH A 176 976 176 HOH HOH . D 4 HOH A 177 977 177 HOH HOH . D 4 HOH A 178 978 178 HOH HOH . D 4 HOH A 179 979 179 HOH HOH . D 4 HOH A 180 980 180 HOH HOH . D 4 HOH A 181 981 181 HOH HOH . D 4 HOH A 182 982 182 HOH HOH . D 4 HOH A 183 983 183 HOH HOH . D 4 HOH A 184 984 184 HOH HOH . D 4 HOH A 185 985 185 HOH HOH . D 4 HOH A 186 986 186 HOH HOH . D 4 HOH A 187 987 187 HOH HOH . D 4 HOH A 188 988 188 HOH HOH . D 4 HOH A 189 989 189 HOH HOH . D 4 HOH A 190 990 190 HOH HOH . D 4 HOH A 191 991 191 HOH HOH . D 4 HOH A 192 992 192 HOH HOH . D 4 HOH A 193 993 193 HOH HOH . D 4 HOH A 194 994 194 HOH HOH . D 4 HOH A 195 995 195 HOH HOH . D 4 HOH A 196 996 196 HOH HOH . D 4 HOH A 197 997 197 HOH HOH . D 4 HOH A 198 998 198 HOH HOH . D 4 HOH A 199 999 199 HOH HOH . D 4 HOH A 200 1000 200 HOH HOH . D 4 HOH A 201 1001 201 HOH HOH . D 4 HOH A 202 1002 202 HOH HOH . D 4 HOH A 203 1003 203 HOH HOH . D 4 HOH A 204 1004 204 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 3YT . . . C 3 0.718 4.489 13.29 1 34.32 ? C2 3YT 702 A 1 HETATM 2 C C3 3YT . . . C 3 -0.713 4.644 12.747 1 36.36 ? C3 3YT 702 A 1 HETATM 3 C C11 3YT . . . C 3 5.217 1.822 14.526 1 34.13 ? C11 3YT 702 A 1 HETATM 4 C C12 3YT . . . C 3 4.43 0.685 14.733 1 29.3 ? C12 3YT 702 A 1 HETATM 5 C C13 3YT . . . C 3 4.971 -0.429 15.551 1 24.63 ? C13 3YT 702 A 1 HETATM 6 C C16 3YT . . . C 3 3.15 0.61 14.218 1 28.52 ? C16 3YT 702 A 1 HETATM 7 C C18 3YT . . . C 3 1.124 -0.666 14.321 1 25.92 ? C18 3YT 702 A 1 HETATM 8 C C19 3YT . . . C 3 0.563 -1.705 15.013 1 25.05 ? C19 3YT 702 A 1 HETATM 9 C C20 3YT . . . C 3 -0.759 -2.019 14.863 1 28.15 ? C20 3YT 702 A 1 HETATM 10 C C21 3YT . . . C 3 -1.555 -1.247 14.042 1 30.3 ? C21 3YT 702 A 1 HETATM 11 C C22 3YT . . . C 3 -1.032 -0.189 13.32 1 31.66 ? C22 3YT 702 A 1 HETATM 12 C C23 3YT . . . C 3 0.336 0.091 13.462 1 28.88 ? C23 3YT 702 A 1 HETATM 13 C C26 3YT . . . C 3 -3.808 1.228 11.957 1 40.1 ? C26 3YT 702 A 1 HETATM 14 C C27 3YT . . . C 3 -2.733 1.918 11.245 1 39.98 ? C27 3YT 702 A 1 HETATM 15 N N1 3YT . . . C 3 1.207 5.825 13.66 1 29.08 ? N1 3YT 702 A 1 HETATM 16 C C4 3YT . . . C 3 -0.752 5.388 11.393 1 35.99 ? C4 3YT 702 A 1 HETATM 17 C C5 3YT . . . C 3 0.128 4.687 10.337 1 36.19 ? C5 3YT 702 A 1 HETATM 18 C C6 3YT . . . C 3 1.564 4.704 10.886 1 36.44 ? C6 3YT 702 A 1 HETATM 19 C C7 3YT . . . C 3 1.634 3.885 12.19 1 36.27 ? C7 3YT 702 A 1 HETATM 20 N N8 3YT . . . C 3 3.003 3.785 12.63 1 36 ? N8 3YT 702 A 1 HETATM 21 C C9 3YT . . . C 3 3.468 2.732 13.313 1 34.66 ? C9 3YT 702 A 1 HETATM 22 N N10 3YT . . . C 3 4.698 2.807 13.817 1 35.5 ? N10 3YT 702 A 1 HETATM 23 N N14 3YT . . . C 3 6.203 -0.331 15.886 1 22.9 ? N14 3YT 702 A 1 HETATM 24 O O15 3YT . . . C 3 4.225 -1.282 15.902 1 25.59 ? O15 3YT 702 A 1 HETATM 25 N N17 3YT . . . C 3 2.419 -0.484 14.489 1 26.8 ? N17 3YT 702 A 1 HETATM 26 N N24 3YT . . . C 3 -1.907 0.517 12.583 1 35.58 ? N24 3YT 702 A 1 HETATM 27 N N25 3YT . . . C 3 -3.243 0.446 12.736 1 38.46 ? N25 3YT 702 A 1 HETATM 28 N N28 3YT . . . C 3 -1.657 1.447 11.678 1 39.74 ? N28 3YT 702 A 1 HETATM 29 N N29 3YT . . . C 3 2.695 1.652 13.501 1 30.27 ? N29 3YT 702 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 372 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 29 #